RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 DDX60Q8IY21 1712 aaKnown RBP15.65■□□□□ 0.1
RBM39-243ENST00000528062 SOCS7O14512 581 aa15.65■□□□□ 0.1
RBM39-243ENST00000528062 RGL2O15211 777 aa15.65■□□□□ 0.1
RBM39-243ENST00000528062 ZNF500O60304 480 aaPredicted RBP15.65■□□□□ 0.1
RBM39-243ENST00000528062 GADD45BO75293 160 aaPredicted RBP15.65■□□□□ 0.1
RBM39-243ENST00000528062 MAP4K4O95819 1239 aaPredicted RBP15.65■□□□□ 0.1
RBM39-243ENST00000528062 LINS1Q8NG48 757 aa15.65■□□□□ 0.1
RBM39-243ENST00000528062 SRCIN1Q9C0H9 1055 aa15.65■□□□□ 0.1
RBM39-243ENST00000528062 PSDA5PKW4 1024 aaPredicted RBP15.64■□□□□ 0.09
RBM39-243ENST00000528062 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.64■□□□□ 0.09
RBM39-243ENST00000528062 SSH3Q8TE77 659 aa15.64■□□□□ 0.09
RBM39-243ENST00000528062 UBTFL1P0CB47 393 aaPredicted RBP15.64■□□□□ 0.09
RBM39-243ENST00000528062 HSPA4P34932 840 aa15.64■□□□□ 0.09
RBM39-243ENST00000528062 NFIXQ14938 502 aa15.64■□□□□ 0.09
RBM39-243ENST00000528062 NLRP10Q86W26 655 aa15.64■□□□□ 0.09
RBM39-243ENST00000528062 LAMB2P55268 1798 aa15.64■□□□□ 0.09
RBM39-243ENST00000528062 MSL1Q68DK7 614 aa15.63■□□□□ 0.09
RBM39-243ENST00000528062 ZKSCAN5Q9Y2L8 839 aa15.63■□□□□ 0.09
RBM39-243ENST00000528062 AOX1Q06278 1338 aa15.63■□□□□ 0.09
RBM39-243ENST00000528062 DDR1Q08345 913 aa15.63■□□□□ 0.09
RBM39-243ENST00000528062 TRIM28Q13263 835 aaKnown RBP15.63■□□□□ 0.09
RBM39-243ENST00000528062 PI4K2BQ8TCG2 481 aa15.63■□□□□ 0.09
RBM39-243ENST00000528062 NIP7Q9Y221 180 aaKnown RBP eCLIP15.63■□□□□ 0.09
RBM39-243ENST00000528062 TM4SF1P30408 202 aa15.62■□□□□ 0.09
RBM39-243ENST00000528062 GCKRQ14397 625 aa15.62■□□□□ 0.09
RBM39-243ENST00000528062 BICDL1Q6ZP65 573 aa15.62■□□□□ 0.09
RBM39-243ENST00000528062 PPP1R42Q7Z4L9 355 aa15.62■□□□□ 0.09
RBM39-243ENST00000528062 ZNF652Q9Y2D9 606 aa15.62■□□□□ 0.09
RBM39-243ENST00000528062 TNRC6CQ9HCJ0 1690 aaKnown RBP15.62■□□□□ 0.09
RBM39-243ENST00000528062 RPAP1Q9BWH6 1393 aaPredicted RBP15.62■□□□□ 0.09
RBM39-243ENST00000528062 HSP90AB3PQ58FF7 597 aa15.62■□□□□ 0.09
RBM39-243ENST00000528062 SUSD4Q5VX71 490 aa15.62■□□□□ 0.09
RBM39-243ENST00000528062 SYNE4Q8N205 404 aa15.62■□□□□ 0.09
RBM39-243ENST00000528062 R3HCC1Q9Y3T6 440 aaKnown RBP15.62■□□□□ 0.09
RBM39-243ENST00000528062 ANKRD31Q8N7Z5 1873 aa15.61■□□□□ 0.09
RBM39-243ENST00000528062 MYH3P11055 1940 aa15.61■□□□□ 0.09
RBM39-243ENST00000528062 SURF6O75683 361 aaKnown RBP15.61■□□□□ 0.09
RBM39-243ENST00000528062 ALDH1L1O75891 902 aa15.61■□□□□ 0.09
RBM39-243ENST00000528062 NBPF7P0C2Y1 421 aaPredicted RBP15.61■□□□□ 0.09
RBM39-243ENST00000528062 CASP7P55210 303 aa15.61■□□□□ 0.09
RBM39-243ENST00000528062 NEXNQ0ZGT2 675 aa15.61■□□□□ 0.09
RBM39-243ENST00000528062 POLA2Q14181 598 aa15.61■□□□□ 0.09
RBM39-243ENST00000528062 USP48Q86UV5 1035 aa15.61■□□□□ 0.09
RBM39-243ENST00000528062 JARID2Q92833 1246 aaPredicted RBP15.61■□□□□ 0.09
RBM39-243ENST00000528062 CCDC191Q8NCU4 936 aa15.6■□□□□ 0.09
RBM39-243ENST00000528062 TSPY26PQ9H489 355 aa15.6■□□□□ 0.09
RBM39-243ENST00000528062 NTSR2O95665 410 aa15.6■□□□□ 0.09
RBM39-243ENST00000528062 RHPN1Q8TCX5 695 aa15.6■□□□□ 0.09
RBM39-243ENST00000528062 UTYO14607 1347 aa15.6■□□□□ 0.09
RBM39-243ENST00000528062 RAD50Q92878 1312 aa15.6■□□□□ 0.09
RBM39-243ENST00000528062 POLRMTO00411 1230 aaKnown RBP15.59■□□□□ 0.09
RBM39-243ENST00000528062 SGSM2O43147 1006 aa15.59■□□□□ 0.09
RBM39-243ENST00000528062 RASEFQ8IZ41 740 aa15.59■□□□□ 0.09
RBM39-243ENST00000528062 LARP6Q9BRS8 491 aaKnown RBP15.59■□□□□ 0.09
RBM39-243ENST00000528062 CWC25Q9NXE8 425 aaPredicted RBP15.59■□□□□ 0.09
RBM39-243ENST00000528062 SNX14Q9Y5W7 946 aa15.59■□□□□ 0.09
RBM39-243ENST00000528062 CARMIL3Q8ND23 1372 aa15.59■□□□□ 0.09
RBM39-243ENST00000528062 KAZALD1Q96I82 304 aa15.59■□□□□ 0.09
RBM39-243ENST00000528062 TTC14Q96N46 770 aa15.59■□□□□ 0.09
RBM39-243ENST00000528062 WDR33Q9C0J8 1336 aaKnown RBP15.59■□□□□ 0.09
RBM39-243ENST00000528062 ABCC12Q96J65 1359 aa15.59■□□□□ 0.09
RBM39-243ENST00000528062 FAM177BA6PVY3 158 aa15.58■□□□□ 0.09
RBM39-243ENST00000528062 GRM8O00222 908 aa15.58■□□□□ 0.09
RBM39-243ENST00000528062 ZBTB7AO95365 584 aa15.58■□□□□ 0.09
RBM39-243ENST00000528062 TERF1P54274 439 aa15.58■□□□□ 0.09
RBM39-243ENST00000528062 LSG1Q9H089 658 aaKnown RBP15.58■□□□□ 0.09
RBM39-243ENST00000528062 CCDC39Q9UFE4 941 aa15.58■□□□□ 0.09
RBM39-243ENST00000528062 H7C1W4 665 aa15.58■□□□□ 0.08
RBM39-243ENST00000528062 SRGAP3O43295 1099 aa15.58■□□□□ 0.08
RBM39-243ENST00000528062 EPB41L2O43491 1005 aaKnown RBP15.58■□□□□ 0.08
RBM39-243ENST00000528062 RAB11FIP3O75154 756 aa15.58■□□□□ 0.08
RBM39-243ENST00000528062 NLGN1Q8N2Q7 840 aa15.58■□□□□ 0.08
RBM39-243ENST00000528062 FAM89AQ96GI7 184 aa15.58■□□□□ 0.08
RBM39-243ENST00000528062 SETDB2Q96T68 719 aa15.58■□□□□ 0.08
RBM39-243ENST00000528062 MMP10P09238 476 aa15.57■□□□□ 0.08
RBM39-243ENST00000528062 MCM5P33992 734 aa15.57■□□□□ 0.08
RBM39-243ENST00000528062 AK2P54819 239 aa15.57■□□□□ 0.08
RBM39-243ENST00000528062 PARP10Q53GL7 1025 aa15.57■□□□□ 0.08
RBM39-243ENST00000528062 RUFY3Q7L099 469 aa15.57■□□□□ 0.08
RBM39-243ENST00000528062 UBE3BQ7Z3V4 1068 aa15.57■□□□□ 0.08
RBM39-243ENST00000528062 SLC16A10Q8TF71 515 aa15.57■□□□□ 0.08
RBM39-243ENST00000528062 CNPY2Q9Y2B0 182 aa15.57■□□□□ 0.08
RBM39-243ENST00000528062 COL4A1P02462 1669 aa15.56■□□□□ 0.08
RBM39-243ENST00000528062 GLIPR1L2Q4G1C9 344 aa15.56■□□□□ 0.08
RBM39-243ENST00000528062 CCDC24Q8N4L8 307 aa15.56■□□□□ 0.08
RBM39-243ENST00000528062 ZBTB38Q8NAP3 1195 aaPredicted RBP15.56■□□□□ 0.08
RBM39-243ENST00000528062 SYAP1Q96A49 352 aaPredicted RBP15.56■□□□□ 0.08
RBM39-243ENST00000528062 KIF13BQ9NQT8 1826 aa15.56■□□□□ 0.08
RBM39-243ENST00000528062 PCCAP05165 728 aaPredicted RBP15.56■□□□□ 0.08
RBM39-243ENST00000528062 CPA1P15085 419 aa15.56■□□□□ 0.08
RBM39-243ENST00000528062 RBM10P98175 930 aaKnown RBP15.56■□□□□ 0.08
RBM39-243ENST00000528062 EPHA10Q5JZY3 1008 aa15.56■□□□□ 0.08
RBM39-243ENST00000528062 HOMEZQ8IX15 550 aa15.56■□□□□ 0.08
RBM39-243ENST00000528062 TMEM87AQ8NBN3 555 aa15.56■□□□□ 0.08
RBM39-243ENST00000528062 KIF1BPQ96EK5 621 aa15.56■□□□□ 0.08
RBM39-243ENST00000528062 SGIP1Q9BQI5 828 aa15.56■□□□□ 0.08
RBM39-243ENST00000528062 COL11A2P13942 1736 aaPredicted RBP15.56■□□□□ 0.08
RBM39-243ENST00000528062 TAF1P21675 1872 aa15.56■□□□□ 0.08
RBM39-243ENST00000528062 DTNBO60941 627 aa15.55■□□□□ 0.08
RBM39-243ENST00000528062 ERFEQ4G0M1 354 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms