RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PTPRCP08575 1304 aa41.93■■■■■ 4.3
SSSCA1-205ENST00000527920 CT47B1P0C2W7 299 aaPredicted RBP41.92■■■■■ 4.3
SSSCA1-205ENST00000527920 GPRC5DQ9NZD1 345 aa41.92■■■■■ 4.3
SSSCA1-205ENST00000527920 GRM8O00222 908 aa41.91■■■■■ 4.3
SSSCA1-205ENST00000527920 EPS15P42566 896 aa41.91■■■■■ 4.3
SSSCA1-205ENST00000527920 SSH1Q8WYL5 1049 aa41.91■■■■■ 4.3
SSSCA1-205ENST00000527920 ZC3H12CQ9C0D7 883 aaKnown RBP41.91■■■■■ 4.3
SSSCA1-205ENST00000527920 SRCIN1Q9C0H9 1055 aa41.91■■■■■ 4.3
SSSCA1-205ENST00000527920 RIMBP2O15034 1052 aa41.9■■■■■ 4.3
SSSCA1-205ENST00000527920 RAD17O75943 681 aa41.9■■■■■ 4.3
SSSCA1-205ENST00000527920 ITGA6P23229 1130 aa41.9■■■■■ 4.3
SSSCA1-205ENST00000527920 ALDH1L2Q3SY69 923 aa41.9■■■■■ 4.3
SSSCA1-205ENST00000527920 ATP2B4P23634 1241 aa41.89■■■■■ 4.3
SSSCA1-205ENST00000527920 GMPSP49915 693 aaPredicted RBP41.89■■■■■ 4.3
SSSCA1-205ENST00000527920 FAM161AQ3B820 660 aa41.89■■■■■ 4.3
SSSCA1-205ENST00000527920 USP50Q70EL3 339 aaPredicted RBP41.89■■■■■ 4.3
SSSCA1-205ENST00000527920 IGHMBP2P38935 993 aaKnown RBP41.88■■■■■ 4.29
SSSCA1-205ENST00000527920 SLC4A10Q6U841 1118 aa41.88■■■■■ 4.29
SSSCA1-205ENST00000527920 DBNDD1Q9H9R9 158 aa41.88■■■■■ 4.29
SSSCA1-205ENST00000527920 MINPP1Q9UNW1 487 aa41.88■■■■■ 4.29
SSSCA1-205ENST00000527920 ECE2O60344 883 aa41.87■■■■■ 4.29
SSSCA1-205ENST00000527920 PASKQ96RG2 1323 aa41.87■■■■■ 4.29
SSSCA1-205ENST00000527920 HTRA3P83110 453 aa41.86■■■■■ 4.29
SSSCA1-205ENST00000527920 FOXO4P98177 505 aa41.86■■■■■ 4.29
SSSCA1-205ENST00000527920 GPR101Q96P66 508 aaPredicted RBP41.86■■■■■ 4.29
SSSCA1-205ENST00000527920 ADARB2Q9NS39 739 aaKnown RBP41.86■■■■■ 4.29
SSSCA1-205ENST00000527920 CLEC11AQ9Y240 323 aa41.86■■■■■ 4.29
SSSCA1-205ENST00000527920 MIER1Q8N108 512 aa41.85■■■■■ 4.29
SSSCA1-205ENST00000527920 C9orf78Q9NZ63 289 aaPredicted RBP41.85■■■■■ 4.29
SSSCA1-205ENST00000527920 ITGBL1O95965 494 aaPredicted RBP41.84■■■■■ 4.29
SSSCA1-205ENST00000527920 KLRG1Q96E93 195 aa41.83■■■■■ 4.29
SSSCA1-205ENST00000527920 BCL2L13Q9BXK5 485 aa41.83■■■■■ 4.29
SSSCA1-205ENST00000527920 DOK7Q18PE1 504 aa41.82■■■■■ 4.29
SSSCA1-205ENST00000527920 DPF2Q92785 391 aa41.82■■■■■ 4.29
SSSCA1-205ENST00000527920 ANKRD18BA2A2Z9 1011 aa41.81■■■■■ 4.28
SSSCA1-205ENST00000527920 PSMD14O00487 310 aa41.81■■■■■ 4.28
SSSCA1-205ENST00000527920 MPHOSPH8Q99549 860 aa41.81■■■■■ 4.28
SSSCA1-205ENST00000527920 MED23Q9ULK4 1368 aa41.8■■■■■ 4.28
SSSCA1-205ENST00000527920 UTYO14607 1347 aa41.8■■■■■ 4.28
SSSCA1-205ENST00000527920 CNTROBQ8N137 903 aa41.8■■■■■ 4.28
SSSCA1-205ENST00000527920 CREBZFQ9NS37 354 aa41.8■■■■■ 4.28
SSSCA1-205ENST00000527920 RPS12P25398 132 aaKnown RBP41.79■■■■■ 4.28
SSSCA1-205ENST00000527920 IFIT5Q13325 482 aaKnown RBP41.79■■■■■ 4.28
SSSCA1-205ENST00000527920 ANKRD2Q9GZV1 360 aa41.79■■■■■ 4.28
SSSCA1-205ENST00000527920 CCT4P50991 539 aaKnown RBP41.78■■■■■ 4.28
SSSCA1-205ENST00000527920 MAP1SQ66K74 1059 aaPredicted RBP41.78■■■■■ 4.28
SSSCA1-205ENST00000527920 SMC4Q9NTJ3 1288 aa41.78■■■■■ 4.28
SSSCA1-205ENST00000527920 LEMD3Q9Y2U8 911 aa41.78■■■■■ 4.28
SSSCA1-205ENST00000527920 G3V3G9 751 aa41.77■■■■■ 4.28
SSSCA1-205ENST00000527920 DCAF8Q5TAQ9 597 aa41.77■■■■■ 4.28
SSSCA1-205ENST00000527920 LMBR1LQ6UX01 489 aa41.77■■■■■ 4.28
SSSCA1-205ENST00000527920 EPHA10Q5JZY3 1008 aa41.76■■■■■ 4.28
SSSCA1-205ENST00000527920 CNOT7Q9UIV1 285 aaKnown RBP41.76■■■■■ 4.28
SSSCA1-205ENST00000527920 SPEF2Q9C093 1822 aa41.76■■■■■ 4.28
SSSCA1-205ENST00000527920 BRPF1P55201 1214 aaPredicted RBP41.75■■■■■ 4.27
SSSCA1-205ENST00000527920 ZNF609O15014 1411 aa41.75■■■■■ 4.27
SSSCA1-205ENST00000527920 VIL1P09327 827 aaKnown RBP41.74■■■■■ 4.27
SSSCA1-205ENST00000527920 PODNQ7Z5L7 613 aa41.74■■■■■ 4.27
SSSCA1-205ENST00000527920 KCNQ5Q9NR82 932 aa41.74■■■■■ 4.27
SSSCA1-205ENST00000527920 H7C1D1 291 aa41.73■■■■■ 4.27
SSSCA1-205ENST00000527920 JMYQ8N9B5 988 aa41.73■■■■■ 4.27
SSSCA1-205ENST00000527920 ZBTB12Q9Y330 459 aaPredicted RBP41.73■■■■■ 4.27
SSSCA1-205ENST00000527920 MICALL2Q8IY33 904 aa41.72■■■■■ 4.27
SSSCA1-205ENST00000527920 ZC3H15Q8WU90 426 aaKnown RBP41.72■■■■■ 4.27
SSSCA1-205ENST00000527920 CHMP3Q9Y3E7 222 aa41.72■■■■■ 4.27
SSSCA1-205ENST00000527920 NBPF7P0C2Y1 421 aaPredicted RBP41.71■■■■■ 4.27
SSSCA1-205ENST00000527920 CCDC57Q2TAC2 916 aa41.71■■■■■ 4.27
SSSCA1-205ENST00000527920 PGAP2Q9UHJ9 254 aa41.71■■■■■ 4.27
SSSCA1-205ENST00000527920 WTIPA6NIX2 430 aaPredicted RBP41.7■■■■■ 4.27
SSSCA1-205ENST00000527920 SUCLG2Q96I99 432 aa41.7■■■■■ 4.27
SSSCA1-205ENST00000527920 SCN9AQ15858 1988 aa41.7■■■■■ 4.27
SSSCA1-205ENST00000527920 CHRNDQ07001 517 aa41.69■■■■■ 4.26
SSSCA1-205ENST00000527920 KAZALD1Q96I82 304 aa41.69■■■■■ 4.26
SSSCA1-205ENST00000527920 ZNF804BA4D1E1 1349 aa41.69■■■■■ 4.26
SSSCA1-205ENST00000527920 TMEM88BA6NKF7 163 aa41.68■■■■■ 4.26
SSSCA1-205ENST00000527920 TRPM4Q8TD43 1214 aa41.67■■■■■ 4.26
SSSCA1-205ENST00000527920 AGBL3Q8NEM8 1001 aa41.66■■■■■ 4.26
SSSCA1-205ENST00000527920 COA1Q9GZY4 146 aa41.66■■■■■ 4.26
SSSCA1-205ENST00000527920 HIRAP54198 1017 aaPredicted RBP41.65■■■■■ 4.26
SSSCA1-205ENST00000527920 RABL6Q3YEC7 729 aaPredicted RBP41.65■■■■■ 4.26
SSSCA1-205ENST00000527920 SHTN1A0MZ66 631 aa41.64■■■■■ 4.26
SSSCA1-205ENST00000527920 RARSP54136 660 aaKnown RBP41.64■■■■■ 4.26
SSSCA1-205ENST00000527920 RSBN1LQ6PCB5 846 aaPredicted RBP41.64■■■■■ 4.26
SSSCA1-205ENST00000527920 PSME4Q14997 1843 aa41.63■■■■■ 4.26
SSSCA1-205ENST00000527920 USP17L3A6NCW0 530 aa41.63■■■■■ 4.25
SSSCA1-205ENST00000527920 USP17L4A6NCW7 530 aa41.63■■■■■ 4.25
SSSCA1-205ENST00000527920 TAF7LQ5H9L4 462 aa41.63■■■■■ 4.25
SSSCA1-205ENST00000527920 USP17L1Q7RTZ2 530 aa41.63■■■■■ 4.25
SSSCA1-205ENST00000527920 USP44Q9H0E7 712 aa41.63■■■■■ 4.25
SSSCA1-205ENST00000527920 LDHAL6AQ6ZMR3 332 aa41.62■■■■■ 4.25
SSSCA1-205ENST00000527920 KCNJ4P48050 445 aa41.61■■■■■ 4.25
SSSCA1-205ENST00000527920 C15orf52Q6ZUT6 534 aaKnown RBP41.61■■■■■ 4.25
SSSCA1-205ENST00000527920 TXNRD3Q86VQ6 643 aa41.61■■■■■ 4.25
SSSCA1-205ENST00000527920 API5Q9BZZ5 524 aaKnown RBP41.61■■■■■ 4.25
SSSCA1-205ENST00000527920 BICC1Q9H694 974 aaKnown RBP41.61■■■■■ 4.25
SSSCA1-205ENST00000527920 NOB1Q9ULX3 412 aaKnown RBP41.61■■■■■ 4.25
SSSCA1-205ENST00000527920 GMLQ99445 158 aa41.6■■■■■ 4.25
SSSCA1-205ENST00000527920 ZNF594Q96JF6 807 aaPredicted RBP41.59■■■■■ 4.25
SSSCA1-205ENST00000527920 KIF16BQ96L93 1317 aa41.59■■■■■ 4.25
SSSCA1-205ENST00000527920 HNRNPUQ00839 825 aaKnown RBP eCLIP41.58■■■■■ 4.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms