RNA–Protein interactions for RNA: ENST00000527551.1

USH1C-206, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 371 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-206ENST00000527551 OLFM4Q6UX06 510 aa15.98■□□□□ 0.15
USH1C-206ENST00000527551 DUOX1Q9NRD9 1551 aa15.98■□□□□ 0.15
USH1C-206ENST00000527551 FBXO3Q9UK99 471 aa15.98■□□□□ 0.15
USH1C-206ENST00000527551 PLIN1O60240 522 aa15.97■□□□□ 0.15
USH1C-206ENST00000527551 IARSP41252 1262 aaKnown RBP15.97■□□□□ 0.15
USH1C-206ENST00000527551 RRP1P56182 461 aaKnown RBP15.97■□□□□ 0.15
USH1C-206ENST00000527551 C9orf131Q5VYM1 1079 aa15.97■□□□□ 0.15
USH1C-206ENST00000527551 LDHAL6AQ6ZMR3 332 aa15.97■□□□□ 0.15
USH1C-206ENST00000527551 RNF181Q9P0P0 153 aa15.97■□□□□ 0.15
USH1C-206ENST00000527551 MINPP1Q9UNW1 487 aa15.97■□□□□ 0.15
USH1C-206ENST00000527551 NSFL1CQ9UNZ2 370 aaKnown RBP15.97■□□□□ 0.15
USH1C-206ENST00000527551 EYA3Q99504 573 aa15.96■□□□□ 0.15
USH1C-206ENST00000527551 ANKIB1Q9P2G1 1089 aa15.96■□□□□ 0.15
USH1C-206ENST00000527551 ATP2B4P23634 1241 aa15.95■□□□□ 0.14
USH1C-206ENST00000527551 GPSM2P81274 684 aa15.95■□□□□ 0.14
USH1C-206ENST00000527551 ZNF277Q9NRM2 450 aaPredicted RBP15.95■□□□□ 0.14
USH1C-206ENST00000527551 CNNM1Q9NRU3 951 aa15.95■□□□□ 0.14
USH1C-206ENST00000527551 GGA1Q9UJY5 639 aa15.95■□□□□ 0.14
USH1C-206ENST00000527551 LEMD3Q9Y2U8 911 aa15.95■□□□□ 0.14
USH1C-206ENST00000527551 COG6Q9Y2V7 657 aa15.95■□□□□ 0.14
USH1C-206ENST00000527551 YY1P25490 414 aa15.94■□□□□ 0.14
USH1C-206ENST00000527551 PRELPP51888 382 aa15.94■□□□□ 0.14
USH1C-206ENST00000527551 KIAA2012Q0VF49 1180 aa15.94■□□□□ 0.14
USH1C-206ENST00000527551 TBC1D16Q8TBP0 767 aa15.94■□□□□ 0.14
USH1C-206ENST00000527551 JDP2Q8WYK2 163 aa15.94■□□□□ 0.14
USH1C-206ENST00000527551 MROH5Q6ZUA9 1318 aa15.94■□□□□ 0.14
USH1C-206ENST00000527551 C6orf229H3BNL8 230 aa15.93■□□□□ 0.14
USH1C-206ENST00000527551 SRGAP3O43295 1099 aa15.93■□□□□ 0.14
USH1C-206ENST00000527551 CIAO1O76071 339 aa15.93■□□□□ 0.14
USH1C-206ENST00000527551 RFX5P48382 616 aaPredicted RBP15.93■□□□□ 0.14
USH1C-206ENST00000527551 CHRNDQ07001 517 aa15.93■□□□□ 0.14
USH1C-206ENST00000527551 WASHC4Q2M389 1173 aa15.93■□□□□ 0.14
USH1C-206ENST00000527551 LARGE2Q8N3Y3 721 aa15.93■□□□□ 0.14
USH1C-206ENST00000527551 COPRSQ9NQ92 184 aa15.93■□□□□ 0.14
USH1C-206ENST00000527551 ZBTB40Q9NUA8 1239 aa15.93■□□□□ 0.14
USH1C-206ENST00000527551 PPIP5K2O43314 1243 aa15.92■□□□□ 0.14
USH1C-206ENST00000527551 UFL1O94874 794 aa15.92■□□□□ 0.14
USH1C-206ENST00000527551 PTPN12Q05209 780 aaKnown RBP15.92■□□□□ 0.14
USH1C-206ENST00000527551 ZNF594Q96JF6 807 aaPredicted RBP15.92■□□□□ 0.14
USH1C-206ENST00000527551 ZC3H12CQ9C0D7 883 aaKnown RBP15.92■□□□□ 0.14
USH1C-206ENST00000527551 POLLQ9UGP5 575 aa15.92■□□□□ 0.14
USH1C-206ENST00000527551 RIPOR2Q9Y4F9 1068 aa15.92■□□□□ 0.14
USH1C-206ENST00000527551 MED23Q9ULK4 1368 aa15.91■□□□□ 0.14
USH1C-206ENST00000527551 EYA2O00167 538 aa15.91■□□□□ 0.14
USH1C-206ENST00000527551 ATP8B2P98198 1209 aa15.91■□□□□ 0.14
USH1C-206ENST00000527551 C20orf194Q5TEA3 1177 aa15.91■□□□□ 0.14
USH1C-206ENST00000527551 SLC51AQ86UW1 340 aa15.91■□□□□ 0.14
USH1C-206ENST00000527551 NIM1KQ8IY84 436 aa15.91■□□□□ 0.14
USH1C-206ENST00000527551 ZNF804BA4D1E1 1349 aa15.91■□□□□ 0.14
USH1C-206ENST00000527551 FZD9O00144 591 aa15.9■□□□□ 0.14
USH1C-206ENST00000527551 AAMPQ13685 434 aa15.9■□□□□ 0.14
USH1C-206ENST00000527551 DPY19L2Q6NUT2 758 aa15.9■□□□□ 0.14
USH1C-206ENST00000527551 C15orf52Q6ZUT6 534 aaKnown RBP15.9■□□□□ 0.14
USH1C-206ENST00000527551 RPAP2Q8IXW5 612 aaPredicted RBP15.9■□□□□ 0.14
USH1C-206ENST00000527551 SSH3Q8TE77 659 aa15.9■□□□□ 0.14
USH1C-206ENST00000527551 PSME4Q14997 1843 aa15.89■□□□□ 0.13
USH1C-206ENST00000527551 IL15P40933 162 aaPredicted RBP15.89■□□□□ 0.13
USH1C-206ENST00000527551 KCNJ4P48050 445 aa15.89■□□□□ 0.13
USH1C-206ENST00000527551 UBE4AQ14139 1066 aa15.89■□□□□ 0.13
USH1C-206ENST00000527551 POLA2Q14181 598 aa15.89■□□□□ 0.13
USH1C-206ENST00000527551 AOC3Q16853 763 aa15.89■□□□□ 0.13
USH1C-206ENST00000527551 ZNRF3Q9ULT6 936 aa15.89■□□□□ 0.13
USH1C-206ENST00000527551 KDM2BQ8NHM5 1336 aa15.89■□□□□ 0.13
USH1C-206ENST00000527551 COL4A5P29400 1685 aa15.89■□□□□ 0.13
USH1C-206ENST00000527551 PNMA6EA0A0J9YXQ4 647 aa15.88■□□□□ 0.13
USH1C-206ENST00000527551 GLTPD2A6NH11 291 aa15.88■□□□□ 0.13
USH1C-206ENST00000527551 PDE8BO95263 885 aa15.88■□□□□ 0.13
USH1C-206ENST00000527551 EIF6P56537 245 aaKnown RBP15.88■□□□□ 0.13
USH1C-206ENST00000527551 METTL24Q5JXM2 366 aa15.88■□□□□ 0.13
USH1C-206ENST00000527551 CEP85Q6P2H3 762 aa15.88■□□□□ 0.13
USH1C-206ENST00000527551 KLHDC4Q8TBB5 520 aa15.88■□□□□ 0.13
USH1C-206ENST00000527551 PUS3Q9BZE2 481 aaKnown RBP15.88■□□□□ 0.13
USH1C-206ENST00000527551 G3V3G9 751 aa15.87■□□□□ 0.13
USH1C-206ENST00000527551 HMMRO75330 724 aa15.87■□□□□ 0.13
USH1C-206ENST00000527551 LRRC24Q50LG9 513 aa15.87■□□□□ 0.13
USH1C-206ENST00000527551 DCAF8Q5TAQ9 597 aa15.87■□□□□ 0.13
USH1C-206ENST00000527551 ATG9AQ7Z3C6 839 aa15.87■□□□□ 0.13
USH1C-206ENST00000527551 VGLL2Q8N8G2 317 aa15.87■□□□□ 0.13
USH1C-206ENST00000527551 C1orf115Q9H7X2 142 aa15.87■□□□□ 0.13
USH1C-206ENST00000527551 WDR90Q96KV7 1748 aa15.87■□□□□ 0.13
USH1C-206ENST00000527551 TAF5LO75529 589 aa15.86■□□□□ 0.13
USH1C-206ENST00000527551 PODNQ7Z5L7 613 aa15.86■□□□□ 0.13
USH1C-206ENST00000527551 GPC2Q8N158 579 aa15.86■□□□□ 0.13
USH1C-206ENST00000527551 COA1Q9GZY4 146 aa15.86■□□□□ 0.13
USH1C-206ENST00000527551 CEP126Q9P2H0 1117 aa15.86■□□□□ 0.13
USH1C-206ENST00000527551 SCN4AP35499 1836 aa15.86■□□□□ 0.13
USH1C-206ENST00000527551 ARAP2Q8WZ64 1704 aa15.85■□□□□ 0.13
USH1C-206ENST00000527551 RIMBP2O15034 1052 aa15.85■□□□□ 0.13
USH1C-206ENST00000527551 G3BP1Q13283 466 aaKnown RBP eCLIP15.85■□□□□ 0.13
USH1C-206ENST00000527551 TNIP1Q15025 636 aa15.85■□□□□ 0.13
USH1C-206ENST00000527551 PUM3Q15397 648 aaKnown RBP15.85■□□□□ 0.13
USH1C-206ENST00000527551 HELBQ8NG08 1087 aaPredicted RBP15.85■□□□□ 0.13
USH1C-206ENST00000527551 SIL1Q9H173 461 aa15.85■□□□□ 0.13
USH1C-206ENST00000527551 NOP58Q9Y2X3 529 aaKnown RBP15.85■□□□□ 0.13
USH1C-206ENST00000527551 SUPT16HQ9Y5B9 1047 aaKnown RBP15.85■□□□□ 0.13
USH1C-206ENST00000527551 IRS2Q9Y4H2 1338 aa15.85■□□□□ 0.13
USH1C-206ENST00000527551 ECE2O60344 883 aa15.84■□□□□ 0.13
USH1C-206ENST00000527551 HSP90AB4PQ58FF6 505 aa15.84■□□□□ 0.13
USH1C-206ENST00000527551 ZNF804AQ7Z570 1209 aa15.84■□□□□ 0.13
USH1C-206ENST00000527551 PA2G4Q9UQ80 394 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms