RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 HACL1Q9UJ83 578 aa21.31■■□□□ 1
NR1H3-229ENST00000527464 HSPA6P17066 643 aa21.3■■□□□ 1
NR1H3-229ENST00000527464 ATP2B4P23634 1241 aa21.3■■□□□ 1
NR1H3-229ENST00000527464 IFIT5Q13325 482 aaKnown RBP21.3■■□□□ 1
NR1H3-229ENST00000527464 ZC3H12CQ9C0D7 883 aaKnown RBP21.3■■□□□ 1
NR1H3-229ENST00000527464 MINPP1Q9UNW1 487 aa21.3■■□□□ 1
NR1H3-229ENST00000527464 GJA3Q9Y6H8 435 aa21.3■■□□□ 1
NR1H3-229ENST00000527464 KIF16BQ96L93 1317 aa21.29■■□□□ 1
NR1H3-229ENST00000527464 UFL1O94874 794 aa21.29■■□□□ 1
NR1H3-229ENST00000527464 CXCL9Q07325 125 aa21.29■■□□□ 1
NR1H3-229ENST00000527464 TNIP1Q15025 636 aa21.29■■□□□ 1
NR1H3-229ENST00000527464 LMBR1LQ6UX01 489 aa21.29■■□□□ 1
NR1H3-229ENST00000527464 ARHGAP45Q92619 1136 aa21.29■■□□□ 1
NR1H3-229ENST00000527464 MPHOSPH8Q99549 860 aa21.29■■□□□ 1
NR1H3-229ENST00000527464 TAF1DQ9H5J8 278 aaPredicted RBP21.29■■□□□ 1
NR1H3-229ENST00000527464 NOB1Q9ULX3 412 aaKnown RBP21.29■■□□□ 1
NR1H3-229ENST00000527464 SPEF2Q9C093 1822 aa21.28■■□□□ 1
NR1H3-229ENST00000527464 CCT4P50991 539 aaKnown RBP21.28■■□□□ 1
NR1H3-229ENST00000527464 CIAPIN1Q6FI81 312 aa21.28■■□□□ 1
NR1H3-229ENST00000527464 ANKRD2Q9GZV1 360 aa21.28■■□□□ 1
NR1H3-229ENST00000527464 NBPF7P0C2Y1 421 aaPredicted RBP21.27■■□□□ 1
NR1H3-229ENST00000527464 LMOD1P29536 600 aaPredicted RBP21.27■■□□□ 1
NR1H3-229ENST00000527464 CCDC57Q2TAC2 916 aa21.27■■□□□ 1
NR1H3-229ENST00000527464 EPHA10Q5JZY3 1008 aa21.27■■□□□ 1
NR1H3-229ENST00000527464 PNMA8AQ86V59 439 aaPredicted RBP21.27■■□□□ 1
NR1H3-229ENST00000527464 CHMP3Q9Y3E7 222 aa21.27■■□□□ 1
NR1H3-229ENST00000527464 RIMBP2O15034 1052 aa21.26■□□□□ 0.99
NR1H3-229ENST00000527464 IPO8O15397 1037 aaKnown RBP21.26■□□□□ 0.99
NR1H3-229ENST00000527464 EPHX2P34913 555 aa21.26■□□□□ 0.99
NR1H3-229ENST00000527464 SUCLG2Q96I99 432 aa21.26■□□□□ 0.99
NR1H3-229ENST00000527464 USP44Q9H0E7 712 aa21.26■□□□□ 0.99
NR1H3-229ENST00000527464 LEMD3Q9Y2U8 911 aa21.26■□□□□ 0.99
NR1H3-229ENST00000527464 YDJCA8MPS7 323 aa21.25■□□□□ 0.99
NR1H3-229ENST00000527464 LDHDQ86WU2 507 aa21.25■□□□□ 0.99
NR1H3-229ENST00000527464 KAZALD1Q96I82 304 aa21.25■□□□□ 0.99
NR1H3-229ENST00000527464 G3V3G9 751 aa21.24■□□□□ 0.99
NR1H3-229ENST00000527464 ECE2O60344 883 aa21.24■□□□□ 0.99
NR1H3-229ENST00000527464 RAD17O75943 681 aa21.24■□□□□ 0.99
NR1H3-229ENST00000527464 SCNN1DP51172 638 aa21.24■□□□□ 0.99
NR1H3-229ENST00000527464 RABL6Q3YEC7 729 aaPredicted RBP21.24■□□□□ 0.99
NR1H3-229ENST00000527464 DCAF8Q5TAQ9 597 aa21.24■□□□□ 0.99
NR1H3-229ENST00000527464 CHADLQ6NUI6 762 aa21.24■□□□□ 0.99
NR1H3-229ENST00000527464 DBNDD1Q9H9R9 158 aa21.24■□□□□ 0.99
NR1H3-229ENST00000527464 MED23Q9ULK4 1368 aa21.23■□□□□ 0.99
NR1H3-229ENST00000527464 APLP1P51693 650 aa21.23■□□□□ 0.99
NR1H3-229ENST00000527464 GPR101Q96P66 508 aaPredicted RBP21.23■□□□□ 0.99
NR1H3-229ENST00000527464 HDAC5Q9UQL6 1122 aa21.23■□□□□ 0.99
NR1H3-229ENST00000527464 DOK7Q18PE1 504 aa21.22■□□□□ 0.99
NR1H3-229ENST00000527464 TAF7LQ5H9L4 462 aa21.22■□□□□ 0.99
NR1H3-229ENST00000527464 BICC1Q9H694 974 aaKnown RBP21.22■□□□□ 0.99
NR1H3-229ENST00000527464 GPRC5DQ9NZD1 345 aa21.22■□□□□ 0.99
NR1H3-229ENST00000527464 GMPSP49915 693 aaPredicted RBP21.21■□□□□ 0.99
NR1H3-229ENST00000527464 CHRNDQ07001 517 aa21.21■□□□□ 0.99
NR1H3-229ENST00000527464 LDHAL6AQ6ZMR3 332 aa21.21■□□□□ 0.99
NR1H3-229ENST00000527464 CEP350Q5VT06 3117 aa21.21■□□□□ 0.99
NR1H3-229ENST00000527464 RPS12P25398 132 aaKnown RBP21.2■□□□□ 0.98
NR1H3-229ENST00000527464 EPS15P42566 896 aa21.2■□□□□ 0.98
NR1H3-229ENST00000527464 EAPPQ56P03 285 aaPredicted RBP21.2■□□□□ 0.98
NR1H3-229ENST00000527464 INTS3Q68E01 1043 aaKnown RBP21.2■□□□□ 0.98
NR1H3-229ENST00000527464 USP50Q70EL3 339 aaPredicted RBP21.2■□□□□ 0.98
NR1H3-229ENST00000527464 PODNQ7Z5L7 613 aa21.2■□□□□ 0.98
NR1H3-229ENST00000527464 ANKRD44Q8N8A2 993 aa21.2■□□□□ 0.98
NR1H3-229ENST00000527464 DPF2Q92785 391 aa21.2■□□□□ 0.98
NR1H3-229ENST00000527464 ADARB2Q9NS39 739 aaKnown RBP21.2■□□□□ 0.98
NR1H3-229ENST00000527464 ZNF804BA4D1E1 1349 aa21.2■□□□□ 0.98
NR1H3-229ENST00000527464 ADAMTSL1Q8N6G6 1762 aa21.19■□□□□ 0.98
NR1H3-229ENST00000527464 PSMD14O00487 310 aa21.19■□□□□ 0.98
NR1H3-229ENST00000527464 BCAR3O75815 825 aa21.19■□□□□ 0.98
NR1H3-229ENST00000527464 POTEIP0CG38 1075 aa21.19■□□□□ 0.98
NR1H3-229ENST00000527464 POTEJP0CG39 1038 aa21.19■□□□□ 0.98
NR1H3-229ENST00000527464 ATF7IPQ6VMQ6 1270 aa21.19■□□□□ 0.98
NR1H3-229ENST00000527464 SCN9AQ15858 1988 aa21.19■□□□□ 0.98
NR1H3-229ENST00000527464 UBTFL1P0CB47 393 aaPredicted RBP21.18■□□□□ 0.98
NR1H3-229ENST00000527464 KCNJ4P48050 445 aa21.18■□□□□ 0.98
NR1H3-229ENST00000527464 ZNF594Q96JF6 807 aaPredicted RBP21.18■□□□□ 0.98
NR1H3-229ENST00000527464 COA1Q9GZY4 146 aa21.18■□□□□ 0.98
NR1H3-229ENST00000527464 CNNM1Q9NRU3 951 aa21.18■□□□□ 0.98
NR1H3-229ENST00000527464 CLEC11AQ9Y240 323 aa21.18■□□□□ 0.98
NR1H3-229ENST00000527464 VIL1P09327 827 aaKnown RBP21.17■□□□□ 0.98
NR1H3-229ENST00000527464 C15orf52Q6ZUT6 534 aaKnown RBP21.17■□□□□ 0.98
NR1H3-229ENST00000527464 PSME4Q14997 1843 aa21.17■□□□□ 0.98
NR1H3-229ENST00000527464 ZNF609O15014 1411 aa21.16■□□□□ 0.98
NR1H3-229ENST00000527464 WTIPA6NIX2 430 aaPredicted RBP21.16■□□□□ 0.98
NR1H3-229ENST00000527464 H7C1D1 291 aa21.16■□□□□ 0.98
NR1H3-229ENST00000527464 TRIM27P14373 513 aa21.16■□□□□ 0.98
NR1H3-229ENST00000527464 FRAT1Q92837 279 aaPredicted RBP21.16■□□□□ 0.98
NR1H3-229ENST00000527464 KCNQ5Q9NR82 932 aa21.16■□□□□ 0.98
NR1H3-229ENST00000527464 CNOT7Q9UIV1 285 aaKnown RBP21.16■□□□□ 0.98
NR1H3-229ENST00000527464 A0A1B0GUL6 1792 aa21.15■□□□□ 0.98
NR1H3-229ENST00000527464 ZKSCAN2Q63HK3 967 aa21.15■□□□□ 0.98
NR1H3-229ENST00000527464 MROH5Q6ZUA9 1318 aa21.14■□□□□ 0.97
NR1H3-229ENST00000527464 USP17L3A6NCW0 530 aa21.14■□□□□ 0.97
NR1H3-229ENST00000527464 USP17L4A6NCW7 530 aa21.14■□□□□ 0.97
NR1H3-229ENST00000527464 GNAI3P08754 354 aa21.14■□□□□ 0.97
NR1H3-229ENST00000527464 USP17L1Q7RTZ2 530 aa21.14■□□□□ 0.97
NR1H3-229ENST00000527464 AGBL3Q8NEM8 1001 aa21.14■□□□□ 0.97
NR1H3-229ENST00000527464 HELBQ8NG08 1087 aaPredicted RBP21.14■□□□□ 0.97
NR1H3-229ENST00000527464 ZBTB12Q9Y330 459 aaPredicted RBP21.14■□□□□ 0.97
NR1H3-229ENST00000527464 RIPOR2Q9Y4F9 1068 aa21.14■□□□□ 0.97
NR1H3-229ENST00000527464 TAF5LO75529 589 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms