RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PDIA4P13667 645 aaKnown RBP14.77□□□□□ -0.05
CAPN1-208ENST00000527323 COL9A3Q14050 684 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-208ENST00000527323 DBF4Q9UBU7 674 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-208ENST00000527323 TUBGCP6Q96RT7 1819 aa14.76□□□□□ -0.05
CAPN1-208ENST00000527323 KCNB2Q92953 911 aa14.76□□□□□ -0.05
CAPN1-208ENST00000527323 PHLPP1O60346 1717 aa14.75□□□□□ -0.05
CAPN1-208ENST00000527323 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-208ENST00000527323 ZNF165P49910 485 aa14.75□□□□□ -0.05
CAPN1-208ENST00000527323 COPS6Q7L5N1 327 aa14.75□□□□□ -0.05
CAPN1-208ENST00000527323 EAF2Q96CJ1 260 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-208ENST00000527323 DDX19AQ9NUU7 478 aaKnown RBP14.75□□□□□ -0.05
CAPN1-208ENST00000527323 TMOD3Q9NYL9 352 aa14.75□□□□□ -0.05
CAPN1-208ENST00000527323 HOXB7P09629 217 aa14.75□□□□□ -0.05
CAPN1-208ENST00000527323 DDB1Q16531 1140 aa14.75□□□□□ -0.05
CAPN1-208ENST00000527323 LEO1Q8WVC0 666 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-208ENST00000527323 BCL11BQ9C0K0 894 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-208ENST00000527323 ZBTB3Q9H5J0 574 aa14.75□□□□□ -0.05
CAPN1-208ENST00000527323 USP21Q9UK80 565 aa14.75□□□□□ -0.05
CAPN1-208ENST00000527323 ELP1O95163 1332 aa14.75□□□□□ -0.05
CAPN1-208ENST00000527323 A0A0D9SFI3 127 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 H3BQV1 296 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 ZSCAN20P17040 1043 aaPredicted RBP14.74□□□□□ -0.05
CAPN1-208ENST00000527323 U2AF2P26368 475 aaKnown RBP eCLIP14.74□□□□□ -0.05
CAPN1-208ENST00000527323 DMTNQ08495 405 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 MTX1Q13505 466 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 IFFO2Q5TF58 517 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 XAGE3Q8WTP9 111 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 DNAJC25Q9H1X3 360 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 PCDH11XQ9BZA7 1347 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 PCDH11YQ9BZA8 1340 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 ADCY9O60503 1353 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 ALDH1L1O75891 902 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 HSP90B1P14625 803 aaKnown RBP14.74□□□□□ -0.05
CAPN1-208ENST00000527323 RPS6KB1P23443 525 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 CEBPZQ03701 1054 aaKnown RBP14.74□□□□□ -0.05
CAPN1-208ENST00000527323 KSR2Q6VAB6 950 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 CCDC85AQ96PX6 553 aaPredicted RBP14.74□□□□□ -0.05
CAPN1-208ENST00000527323 NR1I2O75469 434 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 NPM3O75607 178 aaKnown RBP14.74□□□□□ -0.05
CAPN1-208ENST00000527323 TNNT1P13805 278 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 ZNF75DP51815 510 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 TPD52L1Q16890 204 aaPredicted RBP14.74□□□□□ -0.05
CAPN1-208ENST00000527323 ZNF592Q92610 1267 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 TAF6LQ9Y6J9 622 aa14.74□□□□□ -0.05
CAPN1-208ENST00000527323 FGD1P98174 961 aa14.73□□□□□ -0.05
CAPN1-208ENST00000527323 DNAJC10Q8IXB1 793 aa14.73□□□□□ -0.05
CAPN1-208ENST00000527323 MARCH10Q8NA82 808 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-208ENST00000527323 DDX11Q96FC9 970 aa14.73□□□□□ -0.05
CAPN1-208ENST00000527323 CLSTN2Q9H4D0 955 aa14.73□□□□□ -0.05
CAPN1-208ENST00000527323 CLIP2Q9UDT6 1046 aa14.73□□□□□ -0.05
CAPN1-208ENST00000527323 FAM208AQ9UK61 1670 aaKnown RBP14.73□□□□□ -0.05
CAPN1-208ENST00000527323 SASH1O94885 1247 aa14.73□□□□□ -0.05
CAPN1-208ENST00000527323 TLR7Q9NYK1 1049 aaKnown RBP14.73□□□□□ -0.05
CAPN1-208ENST00000527323 NHSL1Q5SYE7 1610 aa14.72□□□□□ -0.05
CAPN1-208ENST00000527323 GOLGA6L19H0YKK7 550 aa14.72□□□□□ -0.05
CAPN1-208ENST00000527323 TTLL7Q6ZT98 887 aa14.72□□□□□ -0.05
CAPN1-208ENST00000527323 SUCLG2Q96I99 432 aa14.72□□□□□ -0.05
CAPN1-208ENST00000527323 BICC1Q9H694 974 aaKnown RBP14.72□□□□□ -0.05
CAPN1-208ENST00000527323 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.72□□□□□ -0.05
CAPN1-208ENST00000527323 JAK2O60674 1132 aa14.72□□□□□ -0.05
CAPN1-208ENST00000527323 FOSBP53539 338 aa14.72□□□□□ -0.05
CAPN1-208ENST00000527323 ZSCAN25Q6NSZ9 544 aa14.72□□□□□ -0.05
CAPN1-208ENST00000527323 RIC3Q7Z5B4 369 aa14.72□□□□□ -0.05
CAPN1-208ENST00000527323 TOB2Q14106 344 aaPredicted RBP14.72□□□□□ -0.05
CAPN1-208ENST00000527323 KLHDC4Q8TBB5 520 aa14.72□□□□□ -0.05
CAPN1-208ENST00000527323 GRM8O00222 908 aa14.71□□□□□ -0.05
CAPN1-208ENST00000527323 UTP14CQ5TAP6 766 aaKnown RBP14.71□□□□□ -0.05
CAPN1-208ENST00000527323 EDC3Q96F86 508 aaKnown RBP14.71□□□□□ -0.05
CAPN1-208ENST00000527323 USP54Q70EL1 1684 aa14.71□□□□□ -0.05
CAPN1-208ENST00000527323 CCDC112Q8NEF3 446 aa14.71□□□□□ -0.06
CAPN1-208ENST00000527323 BRF1Q92994 677 aa14.71□□□□□ -0.06
CAPN1-208ENST00000527323 OVOS2A0A0G2JMS6 1433 aa14.71□□□□□ -0.06
CAPN1-208ENST00000527323 CRYBG1Q9Y4K1 1723 aa14.7□□□□□ -0.06
CAPN1-208ENST00000527323 NBPF26B4DH59 902 aa14.7□□□□□ -0.06
CAPN1-208ENST00000527323 PDIA6Q15084 440 aa14.7□□□□□ -0.06
CAPN1-208ENST00000527323 NBPF14Q5TI25 921 aa14.7□□□□□ -0.06
CAPN1-208ENST00000527323 NBPF10Q6P3W6 841 aaKnown RBP14.7□□□□□ -0.06
CAPN1-208ENST00000527323 ZNF589Q86UQ0 364 aaPredicted RBP14.7□□□□□ -0.06
CAPN1-208ENST00000527323 NBPF15Q8N660 670 aa14.7□□□□□ -0.06
CAPN1-208ENST00000527323 ANKRD7Q92527 254 aa14.7□□□□□ -0.06
CAPN1-208ENST00000527323 PGBD1Q96JS3 809 aa14.7□□□□□ -0.06
CAPN1-208ENST00000527323 CTIFO43310 598 aaKnown RBP14.7□□□□□ -0.06
CAPN1-208ENST00000527323 FMNL2Q96PY5 1086 aa14.7□□□□□ -0.06
CAPN1-208ENST00000527323 MYD88Q99836 296 aa14.7□□□□□ -0.06
CAPN1-208ENST00000527323 SPATA31A1Q5TZJ5 1347 aa14.7□□□□□ -0.06
CAPN1-208ENST00000527323 CACNA1FO60840 1977 aa14.7□□□□□ -0.06
CAPN1-208ENST00000527323 SMTNL1A8MU46 457 aa14.69□□□□□ -0.06
CAPN1-208ENST00000527323 IGSF3O75054 1194 aa14.69□□□□□ -0.06
CAPN1-208ENST00000527323 DDX58O95786 925 aaKnown RBP14.69□□□□□ -0.06
CAPN1-208ENST00000527323 LINS1Q8NG48 757 aa14.69□□□□□ -0.06
CAPN1-208ENST00000527323 TDRD7Q8NHU6 1098 aaKnown RBP14.69□□□□□ -0.06
CAPN1-208ENST00000527323 CACTINQ8WUQ7 758 aaKnown RBP14.69□□□□□ -0.06
CAPN1-208ENST00000527323 SLC4A9Q96Q91 983 aa14.69□□□□□ -0.06
CAPN1-208ENST00000527323 GTPBP4Q9BZE4 634 aaKnown RBP14.69□□□□□ -0.06
CAPN1-208ENST00000527323 PLA2G4DQ86XP0 818 aa14.69□□□□□ -0.06
CAPN1-208ENST00000527323 ATG3Q9NT62 314 aa14.69□□□□□ -0.06
CAPN1-208ENST00000527323 HMG20BQ9P0W2 317 aa14.69□□□□□ -0.06
CAPN1-208ENST00000527323 BECN2A8MW95 431 aa14.69□□□□□ -0.06
CAPN1-208ENST00000527323 SNRPA1P09661 255 aaKnown RBP14.69□□□□□ -0.06
CAPN1-208ENST00000527323 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms