RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 FBXO3Q9UK99 471 aa12.79□□□□□ -0.36
PTPMT1-204ENST00000527079 NDUFB9Q9Y6M9 179 aa12.79□□□□□ -0.36
PTPMT1-204ENST00000527079 A1BGP04217 495 aa12.78□□□□□ -0.36
PTPMT1-204ENST00000527079 CCDC192P0DO97 292 aa12.78□□□□□ -0.36
PTPMT1-204ENST00000527079 LAMA4Q16363 1823 aa12.78□□□□□ -0.36
PTPMT1-204ENST00000527079 KDM4AO75164 1064 aa12.78□□□□□ -0.36
PTPMT1-204ENST00000527079 STK3Q13188 491 aa12.78□□□□□ -0.36
PTPMT1-204ENST00000527079 ZMYM1Q5SVZ6 1142 aa12.78□□□□□ -0.36
PTPMT1-204ENST00000527079 GIMAP6Q6P9H5 292 aa12.78□□□□□ -0.36
PTPMT1-204ENST00000527079 DHX32Q7L7V1 743 aaKnown RBP12.78□□□□□ -0.36
PTPMT1-204ENST00000527079 FERMT3Q86UX7 667 aa12.78□□□□□ -0.36
PTPMT1-204ENST00000527079 USP25Q9UHP3 1055 aa12.78□□□□□ -0.36
PTPMT1-204ENST00000527079 SOS2Q07890 1332 aaPredicted RBP12.78□□□□□ -0.36
PTPMT1-204ENST00000527079 SHANK3Q9BYB0 1731 aa12.78□□□□□ -0.36
PTPMT1-204ENST00000527079 GOLIM4O00461 696 aa12.77□□□□□ -0.36
PTPMT1-204ENST00000527079 LRRFIP1Q32MZ4 808 aaKnown RBP12.77□□□□□ -0.36
PTPMT1-204ENST00000527079 SPATA32Q96LK8 384 aa12.77□□□□□ -0.36
PTPMT1-204ENST00000527079 ZSCAN16Q9H4T2 348 aaPredicted RBP12.77□□□□□ -0.36
PTPMT1-204ENST00000527079 GOLGA6L4A6NEF3 574 aa12.77□□□□□ -0.37
PTPMT1-204ENST00000527079 PFKFB2O60825 505 aa12.77□□□□□ -0.37
PTPMT1-204ENST00000527079 DTNBO60941 627 aa12.77□□□□□ -0.37
PTPMT1-204ENST00000527079 ADCY5O95622 1261 aa12.77□□□□□ -0.37
PTPMT1-204ENST00000527079 IFIT1P09914 478 aaKnown RBP12.77□□□□□ -0.37
PTPMT1-204ENST00000527079 HSP90B1P14625 803 aaKnown RBP12.77□□□□□ -0.37
PTPMT1-204ENST00000527079 TIMM10P62072 90 aa12.77□□□□□ -0.37
PTPMT1-204ENST00000527079 MAP3K11Q16584 847 aa12.77□□□□□ -0.37
PTPMT1-204ENST00000527079 CHMP4CQ96CF2 233 aa12.77□□□□□ -0.37
PTPMT1-204ENST00000527079 ISCA1Q9BUE6 129 aa12.77□□□□□ -0.37
PTPMT1-204ENST00000527079 ZBTB3Q9H5J0 574 aa12.77□□□□□ -0.37
PTPMT1-204ENST00000527079 TRIM28Q13263 835 aaKnown RBP12.76□□□□□ -0.37
PTPMT1-204ENST00000527079 TPRNQ4KMQ1 711 aa12.76□□□□□ -0.37
PTPMT1-204ENST00000527079 SMARCC2Q8TAQ2 1214 aa12.76□□□□□ -0.37
PTPMT1-204ENST00000527079 LEO1Q8WVC0 666 aaPredicted RBP12.76□□□□□ -0.37
PTPMT1-204ENST00000527079 AGXT2Q9BYV1 514 aa12.76□□□□□ -0.37
PTPMT1-204ENST00000527079 NUP62CLQ9H1M0 184 aa12.76□□□□□ -0.37
PTPMT1-204ENST00000527079 KIF3AQ9Y496 699 aa12.76□□□□□ -0.37
PTPMT1-204ENST00000527079 A0A1B0GUL7 405 aa12.76□□□□□ -0.37
PTPMT1-204ENST00000527079 RNF113AO15541 343 aaKnown RBP12.76□□□□□ -0.37
PTPMT1-204ENST00000527079 FGD1P98174 961 aa12.76□□□□□ -0.37
PTPMT1-204ENST00000527079 KIAA2012Q0VF49 1180 aa12.76□□□□□ -0.37
PTPMT1-204ENST00000527079 LRRC24Q50LG9 513 aa12.76□□□□□ -0.37
PTPMT1-204ENST00000527079 BRF1Q92994 677 aa12.76□□□□□ -0.37
PTPMT1-204ENST00000527079 TEX13AQ9BXU3 409 aaPredicted RBP12.76□□□□□ -0.37
PTPMT1-204ENST00000527079 DDX19AQ9NUU7 478 aaKnown RBP12.76□□□□□ -0.37
PTPMT1-204ENST00000527079 CEP126Q9P2H0 1117 aa12.76□□□□□ -0.37
PTPMT1-204ENST00000527079 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.76□□□□□ -0.37
PTPMT1-204ENST00000527079 ABCA3Q99758 1704 aa12.75□□□□□ -0.37
PTPMT1-204ENST00000527079 H3BQV1 296 aa12.75□□□□□ -0.37
PTPMT1-204ENST00000527079 JAK2O60674 1132 aa12.75□□□□□ -0.37
PTPMT1-204ENST00000527079 CHGBP05060 677 aa12.75□□□□□ -0.37
PTPMT1-204ENST00000527079 HMGN5P82970 282 aaKnown RBP12.75□□□□□ -0.37
PTPMT1-204ENST00000527079 EXOSC10Q01780 885 aaKnown RBP12.75□□□□□ -0.37
PTPMT1-204ENST00000527079 RESTQ13127 1097 aa12.75□□□□□ -0.37
PTPMT1-204ENST00000527079 TCIRG1Q13488 830 aa12.75□□□□□ -0.37
PTPMT1-204ENST00000527079 CCDC57Q2TAC2 916 aa12.75□□□□□ -0.37
PTPMT1-204ENST00000527079 IFFO2Q5TF58 517 aa12.75□□□□□ -0.37
PTPMT1-204ENST00000527079 STOX1Q6ZVD7 989 aa12.75□□□□□ -0.37
PTPMT1-204ENST00000527079 CFAP45Q9UL16 551 aa12.75□□□□□ -0.37
PTPMT1-204ENST00000527079 AKAP2Q9Y2D5 859 aa12.75□□□□□ -0.37
PTPMT1-204ENST00000527079 SCRN1Q12765 414 aa12.74□□□□□ -0.37
PTPMT1-204ENST00000527079 NAA16Q6N069 864 aaPredicted RBP12.74□□□□□ -0.37
PTPMT1-204ENST00000527079 FAM173BQ6P4H8 233 aa12.74□□□□□ -0.37
PTPMT1-204ENST00000527079 VSIG10Q8N0Z9 540 aa12.74□□□□□ -0.37
PTPMT1-204ENST00000527079 TPM3P06753 285 aa12.74□□□□□ -0.37
PTPMT1-204ENST00000527079 HSPD1P10809 573 aaKnown RBP12.74□□□□□ -0.37
PTPMT1-204ENST00000527079 LIG1P18858 919 aa12.74□□□□□ -0.37
PTPMT1-204ENST00000527079 CCDC158Q5M9N0 1113 aa12.74□□□□□ -0.37
PTPMT1-204ENST00000527079 RBM43Q6ZSC3 357 aaKnown RBP12.74□□□□□ -0.37
PTPMT1-204ENST00000527079 FBXL16Q8N461 479 aa12.74□□□□□ -0.37
PTPMT1-204ENST00000527079 FAM200AQ8TCP9 573 aa12.74□□□□□ -0.37
PTPMT1-204ENST00000527079 ZNF594Q96JF6 807 aaPredicted RBP12.74□□□□□ -0.37
PTPMT1-204ENST00000527079 PLA2G12BQ9BX93 195 aa12.74□□□□□ -0.37
PTPMT1-204ENST00000527079 CCDC9Q9Y3X0 531 aaKnown RBP12.74□□□□□ -0.37
PTPMT1-204ENST00000527079 ABCC12Q96J65 1359 aa12.74□□□□□ -0.37
PTPMT1-204ENST00000527079 RRP9O43818 475 aaKnown RBP12.73□□□□□ -0.37
PTPMT1-204ENST00000527079 ZFYP08048 801 aaPredicted RBP12.73□□□□□ -0.37
PTPMT1-204ENST00000527079 TNMDQ9H2S6 317 aa12.73□□□□□ -0.37
PTPMT1-204ENST00000527079 TMOD3Q9NYL9 352 aa12.73□□□□□ -0.37
PTPMT1-204ENST00000527079 TFIP11Q9UBB9 837 aaKnown RBP12.73□□□□□ -0.37
PTPMT1-204ENST00000527079 MAST3O60307 1309 aa12.73□□□□□ -0.37
PTPMT1-204ENST00000527079 MYH15Q9Y2K3 1946 aa12.73□□□□□ -0.37
PTPMT1-204ENST00000527079 E7EWF7 191 aa12.73□□□□□ -0.37
PTPMT1-204ENST00000527079 PCCAP05165 728 aaPredicted RBP12.73□□□□□ -0.37
PTPMT1-204ENST00000527079 ATL3Q6DD88 541 aa12.73□□□□□ -0.37
PTPMT1-204ENST00000527079 NSUN7Q8NE18 718 aaKnown RBP12.73□□□□□ -0.37
PTPMT1-204ENST00000527079 ZNF274Q96GC6 653 aaPredicted RBP12.73□□□□□ -0.37
PTPMT1-204ENST00000527079 CLSTN2Q9H4D0 955 aa12.73□□□□□ -0.37
PTPMT1-204ENST00000527079 DACT1Q9NYF0 836 aa12.73□□□□□ -0.37
PTPMT1-204ENST00000527079 SLAIN2Q9P270 581 aa12.73□□□□□ -0.37
PTPMT1-204ENST00000527079 R3HCC1Q9Y3T6 440 aaKnown RBP12.73□□□□□ -0.37
PTPMT1-204ENST00000527079 TOGARAM1Q9Y4F4 1720 aa12.73□□□□□ -0.37
PTPMT1-204ENST00000527079 TYRO3Q06418 890 aa12.72□□□□□ -0.37
PTPMT1-204ENST00000527079 KIF6Q6ZMV9 814 aa12.72□□□□□ -0.37
PTPMT1-204ENST00000527079 CTNNA3Q9UI47 895 aa12.72□□□□□ -0.37
PTPMT1-204ENST00000527079 EVA1CP58658 441 aa12.72□□□□□ -0.37
PTPMT1-204ENST00000527079 PIBF1Q8WXW3 757 aa12.72□□□□□ -0.37
PTPMT1-204ENST00000527079 LRRC2Q9BYS8 371 aa12.72□□□□□ -0.37
PTPMT1-204ENST00000527079 PUS3Q9BZE2 481 aaKnown RBP12.72□□□□□ -0.37
PTPMT1-204ENST00000527079 CSF1RP07333 972 aa12.71□□□□□ -0.37
PTPMT1-204ENST00000527079 TTC39AQ5SRH9 613 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms