RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 A0A1B0GUL6 1792 aa13.47□□□□□ -0.25
NEDD8-205ENST00000527046 IRS2Q9Y4H2 1338 aa13.46□□□□□ -0.25
NEDD8-205ENST00000527046 SNAP23O00161 211 aa13.46□□□□□ -0.25
NEDD8-205ENST00000527046 GPR162Q16538 588 aa13.46□□□□□ -0.25
NEDD8-205ENST00000527046 TMC4Q7Z404 712 aa13.46□□□□□ -0.25
NEDD8-205ENST00000527046 RPAP2Q8IXW5 612 aaPredicted RBP13.46□□□□□ -0.25
NEDD8-205ENST00000527046 PODXL2Q9NZ53 605 aa13.46□□□□□ -0.25
NEDD8-205ENST00000527046 POLLQ9UGP5 575 aa13.46□□□□□ -0.25
NEDD8-205ENST00000527046 NOP58Q9Y2X3 529 aaKnown RBP13.46□□□□□ -0.25
NEDD8-205ENST00000527046 COL4A5P29400 1685 aa13.45□□□□□ -0.26
NEDD8-205ENST00000527046 EYA2O00167 538 aa13.45□□□□□ -0.26
NEDD8-205ENST00000527046 CHRNDQ07001 517 aa13.45□□□□□ -0.26
NEDD8-205ENST00000527046 LDHAL6AQ6ZMR3 332 aa13.45□□□□□ -0.26
NEDD8-205ENST00000527046 HELBQ8NG08 1087 aaPredicted RBP13.45□□□□□ -0.26
NEDD8-205ENST00000527046 TAF5LO75529 589 aa13.44□□□□□ -0.26
NEDD8-205ENST00000527046 SASH1O94885 1247 aa13.44□□□□□ -0.26
NEDD8-205ENST00000527046 IGHMBP2P38935 993 aaKnown RBP13.44□□□□□ -0.26
NEDD8-205ENST00000527046 CCDC93Q567U6 631 aa13.44□□□□□ -0.26
NEDD8-205ENST00000527046 CC2D2BQ6DHV5 1058 aa13.44□□□□□ -0.26
NEDD8-205ENST00000527046 ARHGAP27Q6ZUM4 889 aa13.44□□□□□ -0.26
NEDD8-205ENST00000527046 TXNRD3Q86VQ6 643 aa13.44□□□□□ -0.26
NEDD8-205ENST00000527046 PELP1Q8IZL8 1130 aaKnown RBP13.44□□□□□ -0.26
NEDD8-205ENST00000527046 TBC1D16Q8TBP0 767 aa13.44□□□□□ -0.26
NEDD8-205ENST00000527046 CCDC88AQ3V6T2 1871 aa13.44□□□□□ -0.26
NEDD8-205ENST00000527046 LTBP3Q9NS15 1303 aa13.43□□□□□ -0.26
NEDD8-205ENST00000527046 CIAO1O76071 339 aa13.43□□□□□ -0.26
NEDD8-205ENST00000527046 CENPBP07199 599 aaPredicted RBP13.43□□□□□ -0.26
NEDD8-205ENST00000527046 RASSF7Q02833 373 aa13.43□□□□□ -0.26
NEDD8-205ENST00000527046 RTKN2Q8IZC4 609 aa13.43□□□□□ -0.26
NEDD8-205ENST00000527046 MPNDQ8N594 471 aa13.43□□□□□ -0.26
NEDD8-205ENST00000527046 GPR101Q96P66 508 aaPredicted RBP13.43□□□□□ -0.26
NEDD8-205ENST00000527046 PSMD1Q99460 953 aa13.43□□□□□ -0.26
NEDD8-205ENST00000527046 MPHOSPH8Q99549 860 aa13.43□□□□□ -0.26
NEDD8-205ENST00000527046 CHMP4BQ9H444 224 aaKnown RBP13.43□□□□□ -0.26
NEDD8-205ENST00000527046 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
NEDD8-205ENST00000527046 NSFL1CQ9UNZ2 370 aaKnown RBP13.43□□□□□ -0.26
NEDD8-205ENST00000527046 GRIN3BO60391 1043 aa13.42□□□□□ -0.26
NEDD8-205ENST00000527046 IGHDP01880 384 aa13.42□□□□□ -0.26
NEDD8-205ENST00000527046 FGFR2P21802 821 aa13.42□□□□□ -0.26
NEDD8-205ENST00000527046 KLRK1P26718 216 aa13.42□□□□□ -0.26
NEDD8-205ENST00000527046 FKBP4Q02790 459 aaKnown RBP eCLIP13.42□□□□□ -0.26
NEDD8-205ENST00000527046 SIL1Q9H173 461 aa13.42□□□□□ -0.26
NEDD8-205ENST00000527046 SOGA3Q5TF21 947 aa13.41□□□□□ -0.26
NEDD8-205ENST00000527046 DCTPP1Q9H773 170 aa13.41□□□□□ -0.26
NEDD8-205ENST00000527046 ZNF277Q9NRM2 450 aaPredicted RBP13.41□□□□□ -0.26
NEDD8-205ENST00000527046 CNNM1Q9NRU3 951 aa13.41□□□□□ -0.26
NEDD8-205ENST00000527046 XDHP47989 1333 aa13.4□□□□□ -0.26
NEDD8-205ENST00000527046 SURF6O75683 361 aaKnown RBP13.4□□□□□ -0.26
NEDD8-205ENST00000527046 PDE8BO95263 885 aa13.4□□□□□ -0.26
NEDD8-205ENST00000527046 IL15P40933 162 aaPredicted RBP13.4□□□□□ -0.26
NEDD8-205ENST00000527046 TFCP2Q12800 502 aa13.4□□□□□ -0.26
NEDD8-205ENST00000527046 AAMPQ13685 434 aa13.4□□□□□ -0.26
NEDD8-205ENST00000527046 GRIPAP1Q4V328 841 aa13.4□□□□□ -0.26
NEDD8-205ENST00000527046 TAF7LQ5H9L4 462 aa13.4□□□□□ -0.26
NEDD8-205ENST00000527046 DPP8Q6V1X1 898 aaPredicted RBP13.4□□□□□ -0.26
NEDD8-205ENST00000527046 ANKRD2Q9GZV1 360 aa13.4□□□□□ -0.26
NEDD8-205ENST00000527046 LEMD3Q9Y2U8 911 aa13.4□□□□□ -0.26
NEDD8-205ENST00000527046 GOLGB1Q14789 3259 aaKnown RBP13.4□□□□□ -0.26
NEDD8-205ENST00000527046 MROH5Q6ZUA9 1318 aa13.39□□□□□ -0.27
NEDD8-205ENST00000527046 CHD4Q14839 1912 aa13.39□□□□□ -0.27
NEDD8-205ENST00000527046 DICER1Q9UPY3 1922 aaKnown RBP13.39□□□□□ -0.27
NEDD8-205ENST00000527046 ATP2B4P23634 1241 aa13.39□□□□□ -0.27
NEDD8-205ENST00000527046 C15orf52Q6ZUT6 534 aaKnown RBP13.39□□□□□ -0.27
NEDD8-205ENST00000527046 TAOK3Q9H2K8 898 aa13.39□□□□□ -0.27
NEDD8-205ENST00000527046 EXOC6BQ9Y2D4 811 aa13.39□□□□□ -0.27
NEDD8-205ENST00000527046 ZNF804BA4D1E1 1349 aa13.39□□□□□ -0.27
NEDD8-205ENST00000527046 UFL1O94874 794 aa13.38□□□□□ -0.27
NEDD8-205ENST00000527046 IARSP41252 1262 aaKnown RBP13.38□□□□□ -0.27
NEDD8-205ENST00000527046 KIAA2012Q0VF49 1180 aa13.38□□□□□ -0.27
NEDD8-205ENST00000527046 HDAC1Q13547 482 aaPredicted RBP13.38□□□□□ -0.27
NEDD8-205ENST00000527046 UBE4AQ14139 1066 aa13.38□□□□□ -0.27
NEDD8-205ENST00000527046 KCNQ5Q9NR82 932 aa13.38□□□□□ -0.27
NEDD8-205ENST00000527046 ANKIB1Q9P2G1 1089 aa13.38□□□□□ -0.27
NEDD8-205ENST00000527046 GGA1Q9UJY5 639 aa13.38□□□□□ -0.27
NEDD8-205ENST00000527046 YDJCA8MPS7 323 aa13.37□□□□□ -0.27
NEDD8-205ENST00000527046 RIMBP2O15034 1052 aa13.37□□□□□ -0.27
NEDD8-205ENST00000527046 LMNB1P20700 586 aa13.37□□□□□ -0.27
NEDD8-205ENST00000527046 TIMM10P62072 90 aa13.37□□□□□ -0.27
NEDD8-205ENST00000527046 G3BP1Q13283 466 aaKnown RBP eCLIP13.37□□□□□ -0.27
NEDD8-205ENST00000527046 AOC3Q16853 763 aa13.37□□□□□ -0.27
NEDD8-205ENST00000527046 WASHC4Q2M389 1173 aa13.37□□□□□ -0.27
NEDD8-205ENST00000527046 METTL24Q5JXM2 366 aa13.37□□□□□ -0.27
NEDD8-205ENST00000527046 C9orf131Q5VYM1 1079 aa13.37□□□□□ -0.27
NEDD8-205ENST00000527046 FAM84BQ96KN1 310 aaPredicted RBP13.37□□□□□ -0.27
NEDD8-205ENST00000527046 VPS33BQ9H267 617 aa13.37□□□□□ -0.27
NEDD8-205ENST00000527046 C6orf229H3BNL8 230 aa13.36□□□□□ -0.27
NEDD8-205ENST00000527046 FBXO33Q7Z6M2 555 aa13.36□□□□□ -0.27
NEDD8-205ENST00000527046 RHPN1Q8TCX5 695 aa13.36□□□□□ -0.27
NEDD8-205ENST00000527046 EAF2Q96CJ1 260 aaPredicted RBP13.36□□□□□ -0.27
NEDD8-205ENST00000527046 CEP126Q9P2H0 1117 aa13.36□□□□□ -0.27
NEDD8-205ENST00000527046 ZNF646O15015 1829 aaPredicted RBP13.36□□□□□ -0.27
NEDD8-205ENST00000527046 SCN9AQ15858 1988 aa13.36□□□□□ -0.27
NEDD8-205ENST00000527046 MED23Q9ULK4 1368 aa13.35□□□□□ -0.27
NEDD8-205ENST00000527046 FZD9O00144 591 aa13.35□□□□□ -0.27
NEDD8-205ENST00000527046 ADORA1P30542 326 aa13.35□□□□□ -0.27
NEDD8-205ENST00000527046 DOK7Q18PE1 504 aa13.35□□□□□ -0.27
NEDD8-205ENST00000527046 SMC5Q8IY18 1101 aa13.35□□□□□ -0.27
NEDD8-205ENST00000527046 SUPT20HQ8NEM7 779 aa13.35□□□□□ -0.27
NEDD8-205ENST00000527046 GPR108Q9NPR9 543 aa13.35□□□□□ -0.27
NEDD8-205ENST00000527046 PPIP5K2O43314 1243 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms