RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 RIC3Q7Z5B4 369 aa15.18■□□□□ 0.02
CAPN1-204ENST00000526468 HHIPL1Q96JK4 782 aa15.18■□□□□ 0.02
CAPN1-204ENST00000526468 POLLQ9UGP5 575 aa15.18■□□□□ 0.02
CAPN1-204ENST00000526468 PGAP2Q9UHJ9 254 aa15.18■□□□□ 0.02
CAPN1-204ENST00000526468 CA12O43570 354 aa15.17■□□□□ 0.02
CAPN1-204ENST00000526468 UFL1O94874 794 aa15.17■□□□□ 0.02
CAPN1-204ENST00000526468 BRPF1P55201 1214 aaPredicted RBP15.17■□□□□ 0.02
CAPN1-204ENST00000526468 HUNKP57058 714 aa15.17■□□□□ 0.02
CAPN1-204ENST00000526468 KRT26Q7Z3Y9 468 aa15.17■□□□□ 0.02
CAPN1-204ENST00000526468 USP48Q86UV5 1035 aa15.17■□□□□ 0.02
CAPN1-204ENST00000526468 MYD88Q99836 296 aa15.17■□□□□ 0.02
CAPN1-204ENST00000526468 ADM5C9JUS6 153 aa15.16■□□□□ 0.02
CAPN1-204ENST00000526468 EGFRP00533 1210 aa15.16■□□□□ 0.02
CAPN1-204ENST00000526468 RPS12P25398 132 aaKnown RBP15.16■□□□□ 0.02
CAPN1-204ENST00000526468 KIF4BQ2VIQ3 1234 aa15.16■□□□□ 0.02
CAPN1-204ENST00000526468 TBC1D16Q8TBP0 767 aa15.16■□□□□ 0.02
CAPN1-204ENST00000526468 DPF2Q92785 391 aa15.16■□□□□ 0.02
CAPN1-204ENST00000526468 IFT57Q9NWB7 429 aa15.16■□□□□ 0.02
CAPN1-204ENST00000526468 GGA3Q9NZ52 723 aa15.16■□□□□ 0.02
CAPN1-204ENST00000526468 ANKIB1Q9P2G1 1089 aa15.16■□□□□ 0.02
CAPN1-204ENST00000526468 ARAP2Q8WZ64 1704 aa15.16■□□□□ 0.02
CAPN1-204ENST00000526468 ZNF609O15014 1411 aa15.16■□□□□ 0.02
CAPN1-204ENST00000526468 CCDC85CA6NKD9 419 aa15.15■□□□□ 0.02
CAPN1-204ENST00000526468 G3V3G9 751 aa15.15■□□□□ 0.02
CAPN1-204ENST00000526468 ELL2O00472 640 aaPredicted RBP15.15■□□□□ 0.02
CAPN1-204ENST00000526468 HSP90B1P14625 803 aaKnown RBP15.15■□□□□ 0.02
CAPN1-204ENST00000526468 RPS8P62241 208 aaKnown RBP15.15■□□□□ 0.02
CAPN1-204ENST00000526468 GNAI1P63096 354 aa15.15■□□□□ 0.02
CAPN1-204ENST00000526468 CALD1Q05682 793 aaKnown RBP15.15■□□□□ 0.02
CAPN1-204ENST00000526468 NOGQ13253 232 aa15.15■□□□□ 0.02
CAPN1-204ENST00000526468 FAM161AQ3B820 660 aa15.15■□□□□ 0.02
CAPN1-204ENST00000526468 RBM26Q5T8P6 1007 aaKnown RBP15.15■□□□□ 0.02
CAPN1-204ENST00000526468 DCAF8Q5TAQ9 597 aa15.15■□□□□ 0.02
CAPN1-204ENST00000526468 DLK2Q6UY11 383 aa15.15■□□□□ 0.02
CAPN1-204ENST00000526468 ZBTB38Q8NAP3 1195 aaPredicted RBP15.15■□□□□ 0.02
CAPN1-204ENST00000526468 CCDC85AQ96PX6 553 aaPredicted RBP15.15■□□□□ 0.02
CAPN1-204ENST00000526468 PHAXQ9H814 394 aaKnown RBP15.15■□□□□ 0.02
CAPN1-204ENST00000526468 SEC31BQ9NQW1 1179 aa15.15■□□□□ 0.02
CAPN1-204ENST00000526468 LAMB1P07942 1786 aa15.15■□□□□ 0.02
CAPN1-204ENST00000526468 TRIM28Q13263 835 aaKnown RBP15.14■□□□□ 0.01
CAPN1-204ENST00000526468 CCDC152Q4G0S7 254 aa15.14■□□□□ 0.01
CAPN1-204ENST00000526468 DCPSQ96C86 337 aaKnown RBP15.14■□□□□ 0.01
CAPN1-204ENST00000526468 GBA2Q9HCG7 927 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-204ENST00000526468 CWC25Q9NXE8 425 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-204ENST00000526468 GGA1Q9UJY5 639 aa15.14■□□□□ 0.01
CAPN1-204ENST00000526468 APAF1O14727 1248 aa15.13■□□□□ 0.01
CAPN1-204ENST00000526468 ZNF853P0CG23 659 aa15.13■□□□□ 0.01
CAPN1-204ENST00000526468 ZC3H12CQ9C0D7 883 aaKnown RBP15.13■□□□□ 0.01
CAPN1-204ENST00000526468 PRKRIP1Q9H875 184 aaPredicted RBP15.13■□□□□ 0.01
CAPN1-204ENST00000526468 KCNQ5Q9NR82 932 aa15.13■□□□□ 0.01
CAPN1-204ENST00000526468 MYH13Q9UKX3 1938 aa15.13■□□□□ 0.01
CAPN1-204ENST00000526468 DDX58O95786 925 aaKnown RBP15.12■□□□□ 0.01
CAPN1-204ENST00000526468 PCCAP05165 728 aaPredicted RBP15.12■□□□□ 0.01
CAPN1-204ENST00000526468 SULF1Q8IWU6 871 aa15.12■□□□□ 0.01
CAPN1-204ENST00000526468 CCDC191Q8NCU4 936 aa15.12■□□□□ 0.01
CAPN1-204ENST00000526468 JARID2Q92833 1246 aaPredicted RBP15.12■□□□□ 0.01
CAPN1-204ENST00000526468 PODXL2Q9NZ53 605 aa15.12■□□□□ 0.01
CAPN1-204ENST00000526468 OTOFQ9HC10 1997 aa15.12■□□□□ 0.01
CAPN1-204ENST00000526468 XDHP47989 1333 aa15.12■□□□□ 0.01
CAPN1-204ENST00000526468 PDE8AO60658 829 aa15.11■□□□□ 0.01
CAPN1-204ENST00000526468 RGMBQ6NW40 437 aa15.11■□□□□ 0.01
CAPN1-204ENST00000526468 ANKRD18AQ8IVF6 992 aa15.11■□□□□ 0.01
CAPN1-204ENST00000526468 C2orf69Q8N8R5 385 aa15.11■□□□□ 0.01
CAPN1-204ENST00000526468 ZIC5Q96T25 663 aa15.11■□□□□ 0.01
CAPN1-204ENST00000526468 MCOLN1Q9GZU1 580 aa15.11■□□□□ 0.01
CAPN1-204ENST00000526468 ASTN2O75129 1339 aaPredicted RBP15.11■□□□□ 0.01
CAPN1-204ENST00000526468 CCDC30Q5VVM6 783 aa15.1■□□□□ 0.01
CAPN1-204ENST00000526468 CDCA5Q96FF9 252 aa15.1■□□□□ 0.01
CAPN1-204ENST00000526468 METTL22Q9BUU2 404 aaPredicted RBP15.1■□□□□ 0.01
CAPN1-204ENST00000526468 VIL1P09327 827 aaKnown RBP15.09■□□□□ 0.01
CAPN1-204ENST00000526468 ZNF157P51786 506 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-204ENST00000526468 CTSWP56202 376 aa15.09■□□□□ 0.01
CAPN1-204ENST00000526468 DGKZQ13574 1117 aa15.09■□□□□ 0.01
CAPN1-204ENST00000526468 RSBN1LQ6PCB5 846 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-204ENST00000526468 C8orf58Q8NAV2 365 aa15.09■□□□□ 0.01
CAPN1-204ENST00000526468 CDC5LQ99459 802 aaKnown RBP15.09■□□□□ 0.01
CAPN1-204ENST00000526468 MAP3K2Q9Y2U5 619 aa15.09■□□□□ 0.01
CAPN1-204ENST00000526468 MED23Q9ULK4 1368 aa15.09■□□□□ 0.01
CAPN1-204ENST00000526468 FAM155AB1AL88 458 aaPredicted RBP15.08■□□□□ 0
CAPN1-204ENST00000526468 ANGEL2Q5VTE6 544 aaKnown RBP15.08■□□□□ 0
CAPN1-204ENST00000526468 AGBL3Q8NEM8 1001 aa15.08■□□□□ 0
CAPN1-204ENST00000526468 SLC10A3P09131 477 aa15.07■□□□□ 0
CAPN1-204ENST00000526468 MLLT1Q03111 559 aaPredicted RBP15.07■□□□□ 0
CAPN1-204ENST00000526468 TSR2Q969E8 191 aaKnown RBP15.07■□□□□ 0
CAPN1-204ENST00000526468 FBXW7Q969H0 707 aa15.07■□□□□ 0
CAPN1-204ENST00000526468 CCDC102AQ96A19 550 aa15.07■□□□□ 0
CAPN1-204ENST00000526468 STK31Q9BXU1 1019 aa15.07■□□□□ 0
CAPN1-204ENST00000526468 CHMP4AQ9BY43 222 aa15.07■□□□□ 0
CAPN1-204ENST00000526468 ATP2B4P23634 1241 aa15.06■□□□□ 0
CAPN1-204ENST00000526468 ZNF280AP59817 542 aaPredicted RBP15.06■□□□□ 0
CAPN1-204ENST00000526468 KIF23Q02241 960 aaPredicted RBP15.06■□□□□ 0
CAPN1-204ENST00000526468 NEXNQ0ZGT2 675 aa15.06■□□□□ 0
CAPN1-204ENST00000526468 TSPYL6Q8N831 410 aa15.06■□□□□ 0
CAPN1-204ENST00000526468 MYOZ2Q9NPC6 264 aa15.06■□□□□ 0
CAPN1-204ENST00000526468 SAGE1Q9NXZ1 904 aa15.06■□□□□ 0
CAPN1-204ENST00000526468 PI4KAP2A4QPH2 592 aa15.05■□□□□ -0
CAPN1-204ENST00000526468 USP17L3A6NCW0 530 aa15.05■□□□□ -0
CAPN1-204ENST00000526468 USP17L4A6NCW7 530 aa15.05■□□□□ -0
CAPN1-204ENST00000526468 USP17L8P0C7I0 530 aa15.05■□□□□ -0
CAPN1-204ENST00000526468 SCARF1Q14162 830 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms