RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 KCNH5Q8NCM2 988 aa9.38□□□□□ -0.91
BDNF-213ENST00000525950 CCDC8Q9H0W5 538 aaPredicted RBP9.38□□□□□ -0.91
BDNF-213ENST00000525950 BOLA2Q9H3K6 86 aa9.38□□□□□ -0.91
BDNF-213ENST00000525950 DHX40Q8IX18 779 aaKnown RBP9.38□□□□□ -0.91
BDNF-213ENST00000525950 DDX54Q8TDD1 881 aaKnown RBP9.38□□□□□ -0.91
BDNF-213ENST00000525950 NAT10Q9H0A0 1025 aaKnown RBP9.38□□□□□ -0.91
BDNF-213ENST00000525950 SKILP12757 684 aa9.37□□□□□ -0.91
BDNF-213ENST00000525950 FAM160A1Q05DH4 1040 aa9.37□□□□□ -0.91
BDNF-213ENST00000525950 CCAR2Q8N163 923 aaKnown RBP9.37□□□□□ -0.91
BDNF-213ENST00000525950 KRT222Q8N1A0 295 aa9.37□□□□□ -0.91
BDNF-213ENST00000525950 TAF6LQ9Y6J9 622 aa9.37□□□□□ -0.91
BDNF-213ENST00000525950 JAK2O60674 1132 aa9.37□□□□□ -0.91
BDNF-213ENST00000525950 SLFN14P0C7P3 912 aa9.37□□□□□ -0.91
BDNF-213ENST00000525950 ZNF530Q6P9A1 599 aaPredicted RBP9.37□□□□□ -0.91
BDNF-213ENST00000525950 Q6ZUG5 572 aa9.37□□□□□ -0.91
BDNF-213ENST00000525950 C11orf57Q6ZUT1 292 aaPredicted RBP9.37□□□□□ -0.91
BDNF-213ENST00000525950 CCAR1Q8IX12 1150 aaKnown RBP9.37□□□□□ -0.91
BDNF-213ENST00000525950 L2HGDHQ9H9P8 463 aa9.37□□□□□ -0.91
BDNF-213ENST00000525950 TLR7Q9NYK1 1049 aaKnown RBP9.37□□□□□ -0.91
BDNF-213ENST00000525950 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.37□□□□□ -0.91
BDNF-213ENST00000525950 A0A1W2PQ27 194 aa9.37□□□□□ -0.91
BDNF-213ENST00000525950 A0A1W2PQ64 194 aa9.37□□□□□ -0.91
BDNF-213ENST00000525950 A0A1W2PQD8 194 aa9.37□□□□□ -0.91
BDNF-213ENST00000525950 CWF19L2Q2TBE0 894 aaKnown RBP9.37□□□□□ -0.91
BDNF-213ENST00000525950 CCDC73Q6ZRK6 1079 aa9.37□□□□□ -0.91
BDNF-213ENST00000525950 LTV1Q96GA3 475 aaPredicted RBP9.37□□□□□ -0.91
BDNF-213ENST00000525950 SH3TC1Q8TE82 1336 aa9.37□□□□□ -0.91
BDNF-213ENST00000525950 SALL1Q9NSC2 1324 aa9.37□□□□□ -0.91
BDNF-213ENST00000525950 TMEM94Q12767 1356 aa9.37□□□□□ -0.91
BDNF-213ENST00000525950 PSDA5PKW4 1024 aaPredicted RBP9.36□□□□□ -0.91
BDNF-213ENST00000525950 ANXA1P04083 346 aa9.36□□□□□ -0.91
BDNF-213ENST00000525950 SCRN1Q12765 414 aa9.36□□□□□ -0.91
BDNF-213ENST00000525950 MCMDC2Q4G0Z9 681 aa9.36□□□□□ -0.91
BDNF-213ENST00000525950 CEP57L1Q8IYX8 460 aa9.36□□□□□ -0.91
BDNF-213ENST00000525950 USHBP1Q8N6Y0 703 aa9.36□□□□□ -0.91
BDNF-213ENST00000525950 NSUN7Q8NE18 718 aaKnown RBP9.36□□□□□ -0.91
BDNF-213ENST00000525950 CCDC69A6NI79 296 aa9.36□□□□□ -0.91
BDNF-213ENST00000525950 BECN2A8MW95 431 aa9.36□□□□□ -0.91
BDNF-213ENST00000525950 SLU7O95391 586 aaKnown RBP9.36□□□□□ -0.91
BDNF-213ENST00000525950 PROSER3Q2NL68 480 aa9.36□□□□□ -0.91
BDNF-213ENST00000525950 DHX32Q7L7V1 743 aaKnown RBP9.36□□□□□ -0.91
BDNF-213ENST00000525950 KINO60870 393 aaKnown RBP9.36□□□□□ -0.91
BDNF-213ENST00000525950 EXOSC10Q01780 885 aaKnown RBP9.36□□□□□ -0.91
BDNF-213ENST00000525950 STK3Q13188 491 aa9.36□□□□□ -0.91
BDNF-213ENST00000525950 PDIA6Q15084 440 aa9.36□□□□□ -0.91
BDNF-213ENST00000525950 CYB5RLQ6IPT4 315 aa9.36□□□□□ -0.91
BDNF-213ENST00000525950 CCDC150Q8NCX0 1101 aa9.36□□□□□ -0.91
BDNF-213ENST00000525950 TCEANC2Q96MN5 208 aa9.36□□□□□ -0.91
BDNF-213ENST00000525950 HAUS7Q99871 368 aa9.36□□□□□ -0.91
BDNF-213ENST00000525950 DSCC1Q9BVC3 393 aa9.36□□□□□ -0.91
BDNF-213ENST00000525950 ABCC6O95255 1503 aa9.36□□□□□ -0.91
BDNF-213ENST00000525950 IGKV5-2P06315 115 aa9.35□□□□□ -0.91
BDNF-213ENST00000525950 CYP21A2P08686 494 aa9.35□□□□□ -0.91
BDNF-213ENST00000525950 TERF2Q15554 542 aa9.35□□□□□ -0.91
BDNF-213ENST00000525950 ZNF274Q96GC6 653 aaPredicted RBP9.35□□□□□ -0.91
BDNF-213ENST00000525950 PALLDQ8WX93 1383 aa9.35□□□□□ -0.91
BDNF-213ENST00000525950 ZNF609O15014 1411 aa9.35□□□□□ -0.91
BDNF-213ENST00000525950 SLIT3O75094 1523 aa9.35□□□□□ -0.91
BDNF-213ENST00000525950 RFX5P48382 616 aaPredicted RBP9.35□□□□□ -0.91
BDNF-213ENST00000525950 EVCP57679 992 aa9.35□□□□□ -0.91
BDNF-213ENST00000525950 RABL6Q3YEC7 729 aaPredicted RBP9.35□□□□□ -0.91
BDNF-213ENST00000525950 KMT5BQ4FZB7 885 aa9.35□□□□□ -0.91
BDNF-213ENST00000525950 C1orf141Q5JVX7 400 aa9.35□□□□□ -0.91
BDNF-213ENST00000525950 GOLPH3LQ9H4A5 285 aa9.35□□□□□ -0.91
BDNF-213ENST00000525950 HELLSQ9NRZ9 838 aa9.35□□□□□ -0.91
BDNF-213ENST00000525950 RTEL1Q9NZ71 1219 aa9.35□□□□□ -0.91
BDNF-213ENST00000525950 ZNF215Q9UL58 517 aaPredicted RBP9.35□□□□□ -0.91
BDNF-213ENST00000525950 NEURL1BA8MQ27 555 aa9.35□□□□□ -0.91
BDNF-213ENST00000525950 DTNBO60941 627 aa9.35□□□□□ -0.91
BDNF-213ENST00000525950 TNNI3KQ59H18 835 aa9.35□□□□□ -0.91
BDNF-213ENST00000525950 ADALQ6DHV7 355 aa9.35□□□□□ -0.91
BDNF-213ENST00000525950 FPGT-TNNI3KV9GXZ4 949 aa9.35□□□□□ -0.91
BDNF-213ENST00000525950 CTDNEP1O95476 244 aa9.34□□□□□ -0.91
BDNF-213ENST00000525950 NEXNQ0ZGT2 675 aa9.34□□□□□ -0.91
BDNF-213ENST00000525950 GCKRQ14397 625 aa9.34□□□□□ -0.91
BDNF-213ENST00000525950 CCDC93Q567U6 631 aa9.34□□□□□ -0.91
BDNF-213ENST00000525950 FMR1NBQ8N0W7 255 aaPredicted RBP9.34□□□□□ -0.91
BDNF-213ENST00000525950 PLEKHG2Q9H7P9 1386 aa9.34□□□□□ -0.91
BDNF-213ENST00000525950 USP27XA6NNY8 438 aa9.34□□□□□ -0.91
BDNF-213ENST00000525950 MPRIPQ6WCQ1 1025 aa9.34□□□□□ -0.91
BDNF-213ENST00000525950 METTL22Q9BUU2 404 aaPredicted RBP9.34□□□□□ -0.91
BDNF-213ENST00000525950 DBNLQ9UJU6 430 aaKnown RBP9.34□□□□□ -0.91
BDNF-213ENST00000525950 PHF8Q9UPP1 1060 aa9.34□□□□□ -0.91
BDNF-213ENST00000525950 LAMA4Q16363 1823 aa9.34□□□□□ -0.91
BDNF-213ENST00000525950 CCP110O43303 1012 aa9.34□□□□□ -0.91
BDNF-213ENST00000525950 H2AFXP16104 143 aaPredicted RBP9.34□□□□□ -0.91
BDNF-213ENST00000525950 NBPF11Q86T75 865 aa9.34□□□□□ -0.91
BDNF-213ENST00000525950 THEMISQ8N1K5 641 aaPredicted RBP9.34□□□□□ -0.91
BDNF-213ENST00000525950 MRPS27Q92552 414 aaKnown RBP9.34□□□□□ -0.91
BDNF-213ENST00000525950 USP28Q96RU2 1077 aa9.34□□□□□ -0.91
BDNF-213ENST00000525950 RGPD2P0DJD1 1756 aa9.34□□□□□ -0.91
BDNF-213ENST00000525950 HSP90B1P14625 803 aaKnown RBP9.33□□□□□ -0.92
BDNF-213ENST00000525950 ZNF771Q7L3S4 317 aaPredicted RBP9.33□□□□□ -0.92
BDNF-213ENST00000525950 KBTBD3Q8NAB2 608 aa9.33□□□□□ -0.92
BDNF-213ENST00000525950 GPR108Q9NPR9 543 aa9.33□□□□□ -0.92
BDNF-213ENST00000525950 USP16Q9Y5T5 823 aa9.33□□□□□ -0.92
BDNF-213ENST00000525950 PXDNQ92626 1479 aa9.33□□□□□ -0.92
BDNF-213ENST00000525950 ERBB3P21860 1342 aa9.33□□□□□ -0.92
BDNF-213ENST00000525950 PTPDC1A2A3K4 754 aa9.33□□□□□ -0.92
BDNF-213ENST00000525950 CCDC66A2RUB6 948 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms