RNA–Protein interactions for RNA: ENST00000525948.5

PUM1-215, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-215	ENST00000525948	HCLS1	P14317	486 aa	Predicted RBP	13.53	□□□□□ -0.24
PUM1-215	ENST00000525948	THUMPD2	Q9BTF0	503 aa	Known RBP	13.53	□□□□□ -0.24
PUM1-215	ENST00000525948	DBNDD1	Q9H9R9	158 aa		13.53	□□□□□ -0.24
PUM1-215	ENST00000525948	HPS5	Q9UPZ3	1129 aa		13.53	□□□□□ -0.24
PUM1-215	ENST00000525948	ERBB4	Q15303	1308 aa		13.53	□□□□□ -0.24
PUM1-215	ENST00000525948	GRAP	Q13588	217 aa		13.52	□□□□□ -0.25
PUM1-215	ENST00000525948	RASAL3	Q86YV0	1011 aa		13.52	□□□□□ -0.25
PUM1-215	ENST00000525948	GRAPL	Q8TC17	118 aa	Predicted RBP	13.52	□□□□□ -0.25
PUM1-215	ENST00000525948	SP7	Q8TDD2	431 aa	Predicted RBP	13.52	□□□□□ -0.25
PUM1-215	ENST00000525948	PNISR	Q8TF01	805 aa	Known RBP	13.52	□□□□□ -0.25
PUM1-215	ENST00000525948	DPF2	Q92785	391 aa		13.52	□□□□□ -0.25
PUM1-215	ENST00000525948	CSRNP1	Q96S65	589 aa		13.52	□□□□□ -0.25
PUM1-215	ENST00000525948	RTL9	Q8NET4	1388 aa		13.52	□□□□□ -0.25
PUM1-215	ENST00000525948	ASTN2	O75129	1339 aa	Predicted RBP	13.51	□□□□□ -0.25
PUM1-215	ENST00000525948	ANXA1	P04083	346 aa		13.51	□□□□□ -0.25
PUM1-215	ENST00000525948	PROSER3	Q2NL68	480 aa		13.51	□□□□□ -0.25
PUM1-215	ENST00000525948	RBM26	Q5T8P6	1007 aa	Known RBP	13.51	□□□□□ -0.25
PUM1-215	ENST00000525948	DDX46	Q7L014	1031 aa	Known RBP	13.51	□□□□□ -0.25
PUM1-215	ENST00000525948	GGA3	Q9NZ52	723 aa		13.51	□□□□□ -0.25
PUM1-215	ENST00000525948	PPP2R1A	P30153	589 aa		13.5	□□□□□ -0.25
PUM1-215	ENST00000525948	PDIA6	Q15084	440 aa		13.5	□□□□□ -0.25
PUM1-215	ENST00000525948	KIF4B	Q2VIQ3	1234 aa		13.5	□□□□□ -0.25
PUM1-215	ENST00000525948	NLRP10	Q86W26	655 aa		13.5	□□□□□ -0.25
PUM1-215	ENST00000525948	DCPS	Q96C86	337 aa	Known RBP	13.5	□□□□□ -0.25
PUM1-215	ENST00000525948	MKI67	P46013	3256 aa	Known RBP	13.5	□□□□□ -0.25
PUM1-215	ENST00000525948	EVX2	Q03828	476 aa		13.49	□□□□□ -0.25
PUM1-215	ENST00000525948	CDCA5	Q96FF9	252 aa		13.49	□□□□□ -0.25
PUM1-215	ENST00000525948	KCNQ5	Q9NR82	932 aa		13.49	□□□□□ -0.25
PUM1-215	ENST00000525948	ZNF646	O15015	1829 aa	Predicted RBP	13.48	□□□□□ -0.25
PUM1-215	ENST00000525948	RIMBP2	O15034	1052 aa		13.48	□□□□□ -0.25
PUM1-215	ENST00000525948	ECE2	O60344	883 aa		13.48	□□□□□ -0.25
PUM1-215	ENST00000525948	RPS12	P25398	132 aa	Known RBP	13.48	□□□□□ -0.25
PUM1-215	ENST00000525948	WASHC4	Q2M389	1173 aa		13.48	□□□□□ -0.25
PUM1-215	ENST00000525948	SULF1	Q8IWU6	871 aa		13.48	□□□□□ -0.25
PUM1-215	ENST00000525948	ZNF428	Q96B54	188 aa		13.48	□□□□□ -0.25
PUM1-215	ENST00000525948	HTT	P42858	3142 aa		13.48	□□□□□ -0.25
PUM1-215	ENST00000525948	SH3TC1	Q8TE82	1336 aa		13.47	□□□□□ -0.25
PUM1-215	ENST00000525948	EIF2S2	P20042	333 aa	Known RBP	13.47	□□□□□ -0.25
PUM1-215	ENST00000525948	DOK7	Q18PE1	504 aa		13.47	□□□□□ -0.25
PUM1-215	ENST00000525948	TMC4	Q7Z404	712 aa		13.47	□□□□□ -0.25
PUM1-215	ENST00000525948	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.47	□□□□□ -0.25
PUM1-215	ENST00000525948	CELF1	Q92879	486 aa	Known RBP	13.47	□□□□□ -0.25
PUM1-215	ENST00000525948	POLL	Q9UGP5	575 aa		13.47	□□□□□ -0.25
PUM1-215	ENST00000525948	TRMT112	Q9UI30	125 aa	Known RBP	13.47	□□□□□ -0.25
PUM1-215	ENST00000525948	BRCA2	P51587	3418 aa		13.47	□□□□□ -0.25
PUM1-215	ENST00000525948	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.47	□□□□□ -0.25
PUM1-215	ENST00000525948	GPSM2	P81274	684 aa		13.46	□□□□□ -0.25
PUM1-215	ENST00000525948	HSP90AB3P	Q58FF7	597 aa		13.46	□□□□□ -0.25
PUM1-215	ENST00000525948	HDAC9	Q9UKV0	1011 aa		13.46	□□□□□ -0.25
PUM1-215	ENST00000525948	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.46	□□□□□ -0.25
PUM1-215	ENST00000525948	ZNF609	O15014	1411 aa		13.46	□□□□□ -0.26
PUM1-215	ENST00000525948	C6orf229	H3BNL8	230 aa		13.45	□□□□□ -0.26
PUM1-215	ENST00000525948	TBC1D8	O95759	1140 aa		13.45	□□□□□ -0.26
PUM1-215	ENST00000525948	AIMP1	Q12904	312 aa	Known RBP	13.45	□□□□□ -0.26
PUM1-215	ENST00000525948	NFE2L2	Q16236	605 aa		13.45	□□□□□ -0.26
PUM1-215	ENST00000525948	PKN2	Q16513	984 aa	Known RBP	13.45	□□□□□ -0.26
PUM1-215	ENST00000525948	ANGEL2	Q5VTE6	544 aa	Known RBP	13.45	□□□□□ -0.26
PUM1-215	ENST00000525948	MOB2	Q70IA6	237 aa		13.45	□□□□□ -0.26
PUM1-215	ENST00000525948	XAGE3	Q8WTP9	111 aa		13.45	□□□□□ -0.26
PUM1-215	ENST00000525948	PLEKHF1	Q96S99	279 aa		13.45	□□□□□ -0.26
PUM1-215	ENST00000525948	TSPYL4	Q9UJ04	414 aa		13.45	□□□□□ -0.26
PUM1-215	ENST00000525948	CENPF	P49454	3210 aa		13.45	□□□□□ -0.26
PUM1-215	ENST00000525948	COPS6	Q7L5N1	327 aa		13.44	□□□□□ -0.26
PUM1-215	ENST00000525948	NECTIN2	Q92692	538 aa		13.44	□□□□□ -0.26
PUM1-215	ENST00000525948	LAMB1	P07942	1786 aa		13.43	□□□□□ -0.26
PUM1-215	ENST00000525948	NEFM	P07197	916 aa		13.43	□□□□□ -0.26
PUM1-215	ENST00000525948	VIL1	P09327	827 aa	Known RBP	13.43	□□□□□ -0.26
PUM1-215	ENST00000525948	TCIRG1	Q13488	830 aa		13.43	□□□□□ -0.26
PUM1-215	ENST00000525948	TBC1D16	Q8TBP0	767 aa		13.43	□□□□□ -0.26
PUM1-215	ENST00000525948	GCC1	Q96CN9	775 aa		13.43	□□□□□ -0.26
PUM1-215	ENST00000525948	EYA3	Q99504	573 aa		13.43	□□□□□ -0.26
PUM1-215	ENST00000525948	SCAF8	Q9UPN6	1271 aa	Known RBP	13.43	□□□□□ -0.26
PUM1-215	ENST00000525948	SPEF2	Q9C093	1822 aa		13.43	□□□□□ -0.26
PUM1-215	ENST00000525948	FKBP1B	P68106	108 aa		13.42	□□□□□ -0.26
PUM1-215	ENST00000525948	SCARF1	Q14162	830 aa		13.42	□□□□□ -0.26
PUM1-215	ENST00000525948	HABP4	Q5JVS0	413 aa	Known RBP	13.42	□□□□□ -0.26
PUM1-215	ENST00000525948	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.42	□□□□□ -0.26
PUM1-215	ENST00000525948	GPR25	O00155	361 aa		13.41	□□□□□ -0.26
PUM1-215	ENST00000525948	ZNF280A	P59817	542 aa	Predicted RBP	13.41	□□□□□ -0.26
PUM1-215	ENST00000525948	FAM89A	Q96GI7	184 aa		13.41	□□□□□ -0.26
PUM1-215	ENST00000525948	PITPNM2	Q9BZ72	1349 aa		13.4	□□□□□ -0.26
PUM1-215	ENST00000525948	MKRN3	Q13064	507 aa	Known RBP	13.4	□□□□□ -0.26
PUM1-215	ENST00000525948	SF3B3	Q15393	1217 aa	Known RBP	13.4	□□□□□ -0.26
PUM1-215	ENST00000525948	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.4	□□□□□ -0.26
PUM1-215	ENST00000525948	CCER1	Q8TC90	406 aa	Predicted RBP	13.4	□□□□□ -0.26
PUM1-215	ENST00000525948	KIAA0100	Q14667	2235 aa	Known RBP	13.4	□□□□□ -0.26
PUM1-215	ENST00000525948	UBE2Q2L	H0YL09	131 aa		13.39	□□□□□ -0.27
PUM1-215	ENST00000525948	UFL1	O94874	794 aa		13.39	□□□□□ -0.27
PUM1-215	ENST00000525948	CLCN6	P51797	869 aa		13.39	□□□□□ -0.27
PUM1-215	ENST00000525948	NOM1	Q5C9Z4	860 aa	Known RBP	13.39	□□□□□ -0.27
PUM1-215	ENST00000525948	RTL5	Q5HYW3	569 aa	Predicted RBP	13.39	□□□□□ -0.27
PUM1-215	ENST00000525948	PRAMEF18	Q5VWM3	479 aa		13.39	□□□□□ -0.27
PUM1-215	ENST00000525948	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.39	□□□□□ -0.27
PUM1-215	ENST00000525948	R3HDML	Q9H3Y0	253 aa		13.39	□□□□□ -0.27
PUM1-215	ENST00000525948	MYOZ2	Q9NPC6	264 aa		13.39	□□□□□ -0.27
PUM1-215	ENST00000525948	MAPK8IP3	Q9UPT6	1336 aa		13.39	□□□□□ -0.27
PUM1-215	ENST00000525948	TM4SF4	P48230	202 aa		13.38	□□□□□ -0.27
PUM1-215	ENST00000525948	KRT24	Q2M2I5	525 aa		13.38	□□□□□ -0.27
PUM1-215	ENST00000525948	AGBL3	Q8NEM8	1001 aa		13.38	□□□□□ -0.27
PUM1-215	ENST00000525948	GML	Q99445	158 aa		13.38	□□□□□ -0.27

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