RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 ITGA6P23229 1130 aa16.29■□□□□ 0.2
TRAPPC4-205ENST00000525079 LMOD1P29536 600 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC4-205ENST00000525079 EPS15P42566 896 aa16.29■□□□□ 0.2
TRAPPC4-205ENST00000525079 FOXO4P98177 505 aa16.29■□□□□ 0.2
TRAPPC4-205ENST00000525079 CIAPIN1Q6FI81 312 aa16.29■□□□□ 0.2
TRAPPC4-205ENST00000525079 EYA3Q99504 573 aa16.29■□□□□ 0.2
TRAPPC4-205ENST00000525079 PODXL2Q9NZ53 605 aa16.29■□□□□ 0.2
TRAPPC4-205ENST00000525079 C9orf78Q9NZ63 289 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC4-205ENST00000525079 GGA1Q9UJY5 639 aa16.29■□□□□ 0.2
TRAPPC4-205ENST00000525079 RTL9Q8NET4 1388 aa16.28■□□□□ 0.2
TRAPPC4-205ENST00000525079 ALDH1L1O75891 902 aa16.28■□□□□ 0.2
TRAPPC4-205ENST00000525079 SCNN1DP51172 638 aa16.28■□□□□ 0.2
TRAPPC4-205ENST00000525079 EPHA10Q5JZY3 1008 aa16.28■□□□□ 0.2
TRAPPC4-205ENST00000525079 ZC3H12CQ9C0D7 883 aaKnown RBP16.28■□□□□ 0.2
TRAPPC4-205ENST00000525079 SMC4Q9NTJ3 1288 aa16.28■□□□□ 0.2
TRAPPC4-205ENST00000525079 BSDC1Q9NW68 430 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC4-205ENST00000525079 MINPP1Q9UNW1 487 aa16.28■□□□□ 0.2
TRAPPC4-205ENST00000525079 CHMP3Q9Y3E7 222 aa16.28■□□□□ 0.2
TRAPPC4-205ENST00000525079 IGHMBP2P38935 993 aaKnown RBP16.27■□□□□ 0.2
TRAPPC4-205ENST00000525079 GMPSP49915 693 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC4-205ENST00000525079 ALDH1L2Q3SY69 923 aa16.27■□□□□ 0.2
TRAPPC4-205ENST00000525079 LDHDQ86WU2 507 aa16.27■□□□□ 0.2
TRAPPC4-205ENST00000525079 KCNQ5Q9NR82 932 aa16.27■□□□□ 0.2
TRAPPC4-205ENST00000525079 PTPRCP08575 1304 aa16.26■□□□□ 0.19
TRAPPC4-205ENST00000525079 XDHP47989 1333 aa16.26■□□□□ 0.19
TRAPPC4-205ENST00000525079 G3V3G9 751 aa16.26■□□□□ 0.19
TRAPPC4-205ENST00000525079 ECE2O60344 883 aa16.26■□□□□ 0.19
TRAPPC4-205ENST00000525079 HNRNPUQ00839 825 aaKnown RBP eCLIP16.26■□□□□ 0.19
TRAPPC4-205ENST00000525079 TNIP1Q15025 636 aa16.26■□□□□ 0.19
TRAPPC4-205ENST00000525079 DCAF8Q5TAQ9 597 aa16.26■□□□□ 0.19
TRAPPC4-205ENST00000525079 LMBR1LQ6UX01 489 aa16.26■□□□□ 0.19
TRAPPC4-205ENST00000525079 ANKRD18BA2A2Z9 1011 aa16.25■□□□□ 0.19
TRAPPC4-205ENST00000525079 ATP2B4P23634 1241 aa16.25■□□□□ 0.19
TRAPPC4-205ENST00000525079 PNMA8AQ86V59 439 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC4-205ENST00000525079 SUCLG2Q96I99 432 aa16.25■□□□□ 0.19
TRAPPC4-205ENST00000525079 MPHOSPH8Q99549 860 aa16.25■□□□□ 0.19
TRAPPC4-205ENST00000525079 GPRC5DQ9NZD1 345 aa16.25■□□□□ 0.19
TRAPPC4-205ENST00000525079 ZBTB12Q9Y330 459 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC4-205ENST00000525079 SHTN1A0MZ66 631 aa16.24■□□□□ 0.19
TRAPPC4-205ENST00000525079 PSMD14O00487 310 aa16.24■□□□□ 0.19
TRAPPC4-205ENST00000525079 NBPF7P0C2Y1 421 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC4-205ENST00000525079 MAP1SQ66K74 1059 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC4-205ENST00000525079 NOB1Q9ULX3 412 aaKnown RBP16.24■□□□□ 0.19
TRAPPC4-205ENST00000525079 ADAMTSL1Q8N6G6 1762 aa16.23■□□□□ 0.19
TRAPPC4-205ENST00000525079 CCT4P50991 539 aaKnown RBP16.23■□□□□ 0.19
TRAPPC4-205ENST00000525079 IFIT5Q13325 482 aaKnown RBP16.23■□□□□ 0.19
TRAPPC4-205ENST00000525079 DNAJC5GQ8N7S2 189 aa16.23■□□□□ 0.19
TRAPPC4-205ENST00000525079 ZNF594Q96JF6 807 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC4-205ENST00000525079 CT47B1P0C2W7 299 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC4-205ENST00000525079 HELBQ8NG08 1087 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC4-205ENST00000525079 KAZALD1Q96I82 304 aa16.22■□□□□ 0.19
TRAPPC4-205ENST00000525079 ADARB2Q9NS39 739 aaKnown RBP16.22■□□□□ 0.19
TRAPPC4-205ENST00000525079 CNOT7Q9UIV1 285 aaKnown RBP16.22■□□□□ 0.19
TRAPPC4-205ENST00000525079 TAF5LO75529 589 aa16.21■□□□□ 0.19
TRAPPC4-205ENST00000525079 ITGBL1O95965 494 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC4-205ENST00000525079 RARSP54136 660 aaKnown RBP16.21■□□□□ 0.19
TRAPPC4-205ENST00000525079 CHRNDQ07001 517 aa16.21■□□□□ 0.19
TRAPPC4-205ENST00000525079 CCDC57Q2TAC2 916 aa16.21■□□□□ 0.19
TRAPPC4-205ENST00000525079 TAF7LQ5H9L4 462 aa16.21■□□□□ 0.19
TRAPPC4-205ENST00000525079 USP50Q70EL3 339 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC4-205ENST00000525079 CNTROBQ8N137 903 aa16.21■□□□□ 0.19
TRAPPC4-205ENST00000525079 ANKRD2Q9GZV1 360 aa16.21■□□□□ 0.19
TRAPPC4-205ENST00000525079 UTYO14607 1347 aa16.2■□□□□ 0.18
TRAPPC4-205ENST00000525079 SCN9AQ15858 1988 aa16.2■□□□□ 0.18
TRAPPC4-205ENST00000525079 SNAP23O00161 211 aa16.2■□□□□ 0.18
TRAPPC4-205ENST00000525079 KLRK1P26718 216 aa16.2■□□□□ 0.18
TRAPPC4-205ENST00000525079 TXNRD3Q86VQ6 643 aa16.2■□□□□ 0.18
TRAPPC4-205ENST00000525079 MICALL2Q8IY33 904 aa16.2■□□□□ 0.18
TRAPPC4-205ENST00000525079 USP44Q9H0E7 712 aa16.2■□□□□ 0.18
TRAPPC4-205ENST00000525079 BICC1Q9H694 974 aaKnown RBP16.2■□□□□ 0.18
TRAPPC4-205ENST00000525079 LEMD3Q9Y2U8 911 aa16.2■□□□□ 0.18
TRAPPC4-205ENST00000525079 ZNF804BA4D1E1 1349 aa16.19■□□□□ 0.18
TRAPPC4-205ENST00000525079 PASKQ96RG2 1323 aa16.19■□□□□ 0.18
TRAPPC4-205ENST00000525079 H7C1D1 291 aa16.19■□□□□ 0.18
TRAPPC4-205ENST00000525079 PLIN1O60240 522 aa16.19■□□□□ 0.18
TRAPPC4-205ENST00000525079 KCNJ4P48050 445 aa16.19■□□□□ 0.18
TRAPPC4-205ENST00000525079 HIRAP54198 1017 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC4-205ENST00000525079 FMR1Q06787 632 aaKnown RBP eCLIP16.19■□□□□ 0.18
TRAPPC4-205ENST00000525079 LDHAL6AQ6ZMR3 332 aa16.19■□□□□ 0.18
TRAPPC4-205ENST00000525079 TRPM4Q8TD43 1214 aa16.19■□□□□ 0.18
TRAPPC4-205ENST00000525079 MED23Q9ULK4 1368 aa16.18■□□□□ 0.18
TRAPPC4-205ENST00000525079 VIL1P09327 827 aaKnown RBP16.18■□□□□ 0.18
TRAPPC4-205ENST00000525079 RBM26Q5T8P6 1007 aaKnown RBP16.18■□□□□ 0.18
TRAPPC4-205ENST00000525079 SAMD7Q7Z3H4 446 aa16.18■□□□□ 0.18
TRAPPC4-205ENST00000525079 ANKRD44Q8N8A2 993 aa16.18■□□□□ 0.18
TRAPPC4-205ENST00000525079 DPF2Q92785 391 aa16.18■□□□□ 0.18
TRAPPC4-205ENST00000525079 CNNM1Q9NRU3 951 aa16.18■□□□□ 0.18
TRAPPC4-205ENST00000525079 BCAR3O75815 825 aa16.17■□□□□ 0.18
TRAPPC4-205ENST00000525079 BRPF1P55201 1214 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC4-205ENST00000525079 TBC1D10BQ4KMP7 808 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC4-205ENST00000525079 FBXW7Q969H0 707 aa16.17■□□□□ 0.18
TRAPPC4-205ENST00000525079 KLRG1Q96E93 195 aa16.17■□□□□ 0.18
TRAPPC4-205ENST00000525079 PUS3Q9BZE2 481 aaKnown RBP16.17■□□□□ 0.18
TRAPPC4-205ENST00000525079 API5Q9BZZ5 524 aaKnown RBP16.17■□□□□ 0.18
TRAPPC4-205ENST00000525079 CEP350Q5VT06 3117 aa16.16■□□□□ 0.18
TRAPPC4-205ENST00000525079 TRAF5O00463 557 aa16.16■□□□□ 0.18
TRAPPC4-205ENST00000525079 EGFRP00533 1210 aa16.16■□□□□ 0.18
TRAPPC4-205ENST00000525079 RPS12P25398 132 aaKnown RBP16.16■□□□□ 0.18
TRAPPC4-205ENST00000525079 PODNQ7Z5L7 613 aa16.16■□□□□ 0.18
TRAPPC4-205ENST00000525079 MXD3Q9BW11 206 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 185.1 ms