RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 STYK1Q6J9G0 422 aa19.54■□□□□ 0.72
TSPAN4-213ENST00000524895 ZNF622Q969S3 477 aaKnown RBP eCLIP19.54■□□□□ 0.72
TSPAN4-213ENST00000524895 LNPKQ9C0E8 428 aa19.54■□□□□ 0.72
TSPAN4-213ENST00000524895 BSDC1Q9NW68 430 aaPredicted RBP19.54■□□□□ 0.72
TSPAN4-213ENST00000524895 DLEC1Q9Y238 1755 aa19.54■□□□□ 0.72
TSPAN4-213ENST00000524895 TFCP2Q12800 502 aa19.53■□□□□ 0.72
TSPAN4-213ENST00000524895 IL1RAPL2Q9NP60 686 aa19.53■□□□□ 0.72
TSPAN4-213ENST00000524895 CEP126Q9P2H0 1117 aa19.53■□□□□ 0.72
TSPAN4-213ENST00000524895 RIPOR2Q9Y4F9 1068 aa19.53■□□□□ 0.72
TSPAN4-213ENST00000524895 PPEF1O14829 653 aaPredicted RBP19.52■□□□□ 0.72
TSPAN4-213ENST00000524895 BBOX1O75936 387 aa19.52■□□□□ 0.72
TSPAN4-213ENST00000524895 CLASRPQ8N2M8 674 aaKnown RBP19.52■□□□□ 0.72
TSPAN4-213ENST00000524895 CD2APQ9Y5K6 639 aa19.52■□□□□ 0.72
TSPAN4-213ENST00000524895 TGFB2P61812 414 aa19.51■□□□□ 0.71
TSPAN4-213ENST00000524895 TMC4Q7Z404 712 aa19.51■□□□□ 0.71
TSPAN4-213ENST00000524895 CNKSR1Q969H4 720 aa19.51■□□□□ 0.71
TSPAN4-213ENST00000524895 KIAA1551Q9HCM1 1747 aa19.51■□□□□ 0.71
TSPAN4-213ENST00000524895 DPEP1P16444 411 aa19.5■□□□□ 0.71
TSPAN4-213ENST00000524895 CHRNDQ07001 517 aa19.5■□□□□ 0.71
TSPAN4-213ENST00000524895 ZNF609O15014 1411 aa19.5■□□□□ 0.71
TSPAN4-213ENST00000524895 CACNA1SQ13698 1873 aa19.5■□□□□ 0.71
TSPAN4-213ENST00000524895 A0A1B0GUL6 1792 aa19.49■□□□□ 0.71
TSPAN4-213ENST00000524895 LRRC37AA6NMS7 1700 aa19.49■□□□□ 0.71
TSPAN4-213ENST00000524895 A0A0G2JLW4 131 aa19.49■□□□□ 0.71
TSPAN4-213ENST00000524895 TNNI3KQ59H18 835 aa19.49■□□□□ 0.71
TSPAN4-213ENST00000524895 AACSQ86V21 672 aa19.49■□□□□ 0.71
TSPAN4-213ENST00000524895 ANKRD2Q9GZV1 360 aa19.49■□□□□ 0.71
TSPAN4-213ENST00000524895 MINPP1Q9UNW1 487 aa19.49■□□□□ 0.71
TSPAN4-213ENST00000524895 AKAP2Q9Y2D5 859 aa19.49■□□□□ 0.71
TSPAN4-213ENST00000524895 FPGT-TNNI3KV9GXZ4 949 aa19.49■□□□□ 0.71
TSPAN4-213ENST00000524895 PDE8BO95263 885 aa19.48■□□□□ 0.71
TSPAN4-213ENST00000524895 PRPF40BQ6NWY9 871 aaKnown RBP19.48■□□□□ 0.71
TSPAN4-213ENST00000524895 VGLL2Q8N8G2 317 aa19.48■□□□□ 0.71
TSPAN4-213ENST00000524895 HELBQ8NG08 1087 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-213ENST00000524895 GPR108Q9NPR9 543 aa19.48■□□□□ 0.71
TSPAN4-213ENST00000524895 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-213ENST00000524895 TAF5LO75529 589 aa19.47■□□□□ 0.71
TSPAN4-213ENST00000524895 IFIT2P09913 472 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-213ENST00000524895 PDE4AP27815 886 aa19.47■□□□□ 0.71
TSPAN4-213ENST00000524895 PUM3Q15397 648 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-213ENST00000524895 ATP2B3Q16720 1220 aa19.47■□□□□ 0.71
TSPAN4-213ENST00000524895 SKAP1Q86WV1 359 aa19.47■□□□□ 0.71
TSPAN4-213ENST00000524895 TMX4Q9H1E5 349 aaPredicted RBP19.47■□□□□ 0.71
TSPAN4-213ENST00000524895 RGS3P49796 1198 aa19.46■□□□□ 0.71
TSPAN4-213ENST00000524895 SP8Q8IXZ3 490 aa19.46■□□□□ 0.71
TSPAN4-213ENST00000524895 C16orf71Q8IYS4 520 aaPredicted RBP19.46■□□□□ 0.71
TSPAN4-213ENST00000524895 TTLL6Q8N841 843 aa19.46■□□□□ 0.71
TSPAN4-213ENST00000524895 EAF2Q96CJ1 260 aaPredicted RBP19.46■□□□□ 0.71
TSPAN4-213ENST00000524895 ANKIB1Q9P2G1 1089 aa19.46■□□□□ 0.71
TSPAN4-213ENST00000524895 ATP6V0A2Q9Y487 856 aa19.46■□□□□ 0.71
TSPAN4-213ENST00000524895 A0A1B0GUL7 405 aa19.45■□□□□ 0.7
TSPAN4-213ENST00000524895 KCNA3P22001 575 aa19.45■□□□□ 0.7
TSPAN4-213ENST00000524895 KCNJ4P48050 445 aa19.45■□□□□ 0.7
TSPAN4-213ENST00000524895 OTUD7AQ8TE49 926 aaPredicted RBP19.45■□□□□ 0.7
TSPAN4-213ENST00000524895 NEUROD6Q96NK8 337 aa19.45■□□□□ 0.7
TSPAN4-213ENST00000524895 CCDC8Q9H0W5 538 aaPredicted RBP19.45■□□□□ 0.7
TSPAN4-213ENST00000524895 XDHP47989 1333 aa19.45■□□□□ 0.7
TSPAN4-213ENST00000524895 SLC51AQ86UW1 340 aa19.44■□□□□ 0.7
TSPAN4-213ENST00000524895 LPIN2Q92539 896 aa19.44■□□□□ 0.7
TSPAN4-213ENST00000524895 GPATCH3Q96I76 525 aa19.44■□□□□ 0.7
TSPAN4-213ENST00000524895 PIM2Q9P1W9 311 aa19.44■□□□□ 0.7
TSPAN4-213ENST00000524895 ARAP2Q8WZ64 1704 aa19.44■□□□□ 0.7
TSPAN4-213ENST00000524895 SLX4Q8IY92 1834 aa19.44■□□□□ 0.7
TSPAN4-213ENST00000524895 SLC5A1P13866 664 aa19.43■□□□□ 0.7
TSPAN4-213ENST00000524895 MX1P20591 662 aa19.43■□□□□ 0.7
TSPAN4-213ENST00000524895 TIMM10P62072 90 aa19.43■□□□□ 0.7
TSPAN4-213ENST00000524895 GPSM2P81274 684 aa19.43■□□□□ 0.7
TSPAN4-213ENST00000524895 FHDC1Q9C0D6 1143 aaPredicted RBP19.43■□□□□ 0.7
TSPAN4-213ENST00000524895 TLR7Q9NYK1 1049 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-213ENST00000524895 NSFL1CQ9UNZ2 370 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-213ENST00000524895 IFIT1P09914 478 aaKnown RBP19.42■□□□□ 0.7
TSPAN4-213ENST00000524895 FGFR2P21802 821 aa19.42■□□□□ 0.7
TSPAN4-213ENST00000524895 UBE4AQ14139 1066 aa19.42■□□□□ 0.7
TSPAN4-213ENST00000524895 NLGN2Q8NFZ4 835 aa19.42■□□□□ 0.7
TSPAN4-213ENST00000524895 DBNDD2Q9BQY9 259 aa19.42■□□□□ 0.7
TSPAN4-213ENST00000524895 ZNF219Q9P2Y4 722 aaPredicted RBP19.42■□□□□ 0.7
TSPAN4-213ENST00000524895 DBNLQ9UJU6 430 aaKnown RBP19.42■□□□□ 0.7
TSPAN4-213ENST00000524895 SALL3Q9BXA9 1300 aa19.42■□□□□ 0.7
TSPAN4-213ENST00000524895 BRCA1P38398 1863 aaKnown RBP19.41■□□□□ 0.7
TSPAN4-213ENST00000524895 SNAP23O00161 211 aa19.41■□□□□ 0.7
TSPAN4-213ENST00000524895 DALRD3Q5D0E6 543 aaKnown RBP19.41■□□□□ 0.7
TSPAN4-213ENST00000524895 GORABQ5T7V8 394 aa19.41■□□□□ 0.7
TSPAN4-213ENST00000524895 PLEKHM2Q8IWE5 1019 aa19.41■□□□□ 0.7
TSPAN4-213ENST00000524895 PODXL2Q9NZ53 605 aa19.41■□□□□ 0.7
TSPAN4-213ENST00000524895 GGA1Q9UJY5 639 aa19.41■□□□□ 0.7
TSPAN4-213ENST00000524895 LEMD3Q9Y2U8 911 aa19.41■□□□□ 0.7
TSPAN4-213ENST00000524895 LTBP1Q14766 1721 aa19.41■□□□□ 0.7
TSPAN4-213ENST00000524895 ZNF804BA4D1E1 1349 aa19.41■□□□□ 0.7
TSPAN4-213ENST00000524895 UFL1O94874 794 aa19.4■□□□□ 0.7
TSPAN4-213ENST00000524895 ATP2B4P23634 1241 aa19.4■□□□□ 0.7
TSPAN4-213ENST00000524895 ADORA1P30542 326 aa19.4■□□□□ 0.7
TSPAN4-213ENST00000524895 CC2D2BQ6DHV5 1058 aa19.4■□□□□ 0.7
TSPAN4-213ENST00000524895 OLFM4Q6UX06 510 aa19.4■□□□□ 0.7
TSPAN4-213ENST00000524895 DPP8Q6V1X1 898 aaPredicted RBP19.4■□□□□ 0.7
TSPAN4-213ENST00000524895 MPNDQ8N594 471 aa19.4■□□□□ 0.7
TSPAN4-213ENST00000524895 XAGE2Q96GT9 111 aa19.4■□□□□ 0.7
TSPAN4-213ENST00000524895 WWC3Q9ULE0 1092 aa19.4■□□□□ 0.7
TSPAN4-213ENST00000524895 TTC41PQ6P2S7 1318 aa19.4■□□□□ 0.7
TSPAN4-213ENST00000524895 C21orf2O43822 256 aa19.39■□□□□ 0.69
TSPAN4-213ENST00000524895 PDE1AP54750 535 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms