RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 TRPM7Q96QT4 1865 aa14.21□□□□□ -0.13
TRAPPC4-204ENST00000524797 UFL1O94874 794 aa14.21□□□□□ -0.14
TRAPPC4-204ENST00000524797 GMPSP49915 693 aaPredicted RBP14.21□□□□□ -0.14
TRAPPC4-204ENST00000524797 DBNDD1Q9H9R9 158 aa14.21□□□□□ -0.14
TRAPPC4-204ENST00000524797 GPRC5DQ9NZD1 345 aa14.21□□□□□ -0.14
TRAPPC4-204ENST00000524797 GGA1Q9UJY5 639 aa14.21□□□□□ -0.14
TRAPPC4-204ENST00000524797 MRPL50Q8N5N7 158 aaKnown RBP14.2□□□□□ -0.14
TRAPPC4-204ENST00000524797 ANKIB1Q9P2G1 1089 aa14.2□□□□□ -0.14
TRAPPC4-204ENST00000524797 ECE2O60344 883 aa14.19□□□□□ -0.14
TRAPPC4-204ENST00000524797 ITGBL1O95965 494 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC4-204ENST00000524797 CSF1RP07333 972 aa14.19□□□□□ -0.14
TRAPPC4-204ENST00000524797 DOK7Q18PE1 504 aa14.19□□□□□ -0.14
TRAPPC4-204ENST00000524797 USP50Q70EL3 339 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC4-204ENST00000524797 CDCA7LQ96GN5 454 aa14.19□□□□□ -0.14
TRAPPC4-204ENST00000524797 BSDC1Q9NW68 430 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC4-204ENST00000524797 XDHP47989 1333 aa14.19□□□□□ -0.14
TRAPPC4-204ENST00000524797 ZNF646O15015 1829 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC4-204ENST00000524797 ATP2B4P23634 1241 aa14.19□□□□□ -0.14
TRAPPC4-204ENST00000524797 FAM161AQ3B820 660 aa14.19□□□□□ -0.14
TRAPPC4-204ENST00000524797 MAP1SQ66K74 1059 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC4-204ENST00000524797 BCL2L13Q9BXK5 485 aa14.19□□□□□ -0.14
TRAPPC4-204ENST00000524797 ADARB2Q9NS39 739 aaKnown RBP14.19□□□□□ -0.14
TRAPPC4-204ENST00000524797 TRMT2AQ8IZ69 625 aaKnown RBP14.18□□□□□ -0.14
TRAPPC4-204ENST00000524797 CNTROBQ8N137 903 aa14.18□□□□□ -0.14
TRAPPC4-204ENST00000524797 ZC3H12CQ9C0D7 883 aaKnown RBP14.18□□□□□ -0.14
TRAPPC4-204ENST00000524797 PSMD14O00487 310 aa14.17□□□□□ -0.14
TRAPPC4-204ENST00000524797 ALDH1L1O75891 902 aa14.17□□□□□ -0.14
TRAPPC4-204ENST00000524797 ITGA6P23229 1130 aa14.17□□□□□ -0.14
TRAPPC4-204ENST00000524797 IGHMBP2P38935 993 aaKnown RBP14.17□□□□□ -0.14
TRAPPC4-204ENST00000524797 FOXO4P98177 505 aa14.17□□□□□ -0.14
TRAPPC4-204ENST00000524797 CREBZFQ9NS37 354 aa14.17□□□□□ -0.14
TRAPPC4-204ENST00000524797 MINPP1Q9UNW1 487 aa14.17□□□□□ -0.14
TRAPPC4-204ENST00000524797 SLC4A10Q6U841 1118 aa14.17□□□□□ -0.14
TRAPPC4-204ENST00000524797 JMYQ8N9B5 988 aa14.17□□□□□ -0.14
TRAPPC4-204ENST00000524797 KCNQ5Q9NR82 932 aa14.17□□□□□ -0.14
TRAPPC4-204ENST00000524797 SHTN1A0MZ66 631 aa14.16□□□□□ -0.14
TRAPPC4-204ENST00000524797 GRM8O00222 908 aa14.16□□□□□ -0.14
TRAPPC4-204ENST00000524797 SSH1Q8WYL5 1049 aa14.16□□□□□ -0.14
TRAPPC4-204ENST00000524797 SRCIN1Q9C0H9 1055 aa14.16□□□□□ -0.14
TRAPPC4-204ENST00000524797 CNOT7Q9UIV1 285 aaKnown RBP14.16□□□□□ -0.14
TRAPPC4-204ENST00000524797 ANKRD18BA2A2Z9 1011 aa14.15□□□□□ -0.14
TRAPPC4-204ENST00000524797 EPHA10Q5JZY3 1008 aa14.15□□□□□ -0.14
TRAPPC4-204ENST00000524797 ZBTB12Q9Y330 459 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC4-204ENST00000524797 POLR2AP24928 1970 aaKnown RBP14.15□□□□□ -0.14
TRAPPC4-204ENST00000524797 MED23Q9ULK4 1368 aa14.15□□□□□ -0.14
TRAPPC4-204ENST00000524797 PTPRCP08575 1304 aa14.15□□□□□ -0.14
TRAPPC4-204ENST00000524797 WTIPA6NIX2 430 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC4-204ENST00000524797 G3V3G9 751 aa14.15□□□□□ -0.14
TRAPPC4-204ENST00000524797 CCT4P50991 539 aaKnown RBP14.15□□□□□ -0.14
TRAPPC4-204ENST00000524797 DCAF8Q5TAQ9 597 aa14.15□□□□□ -0.14
TRAPPC4-204ENST00000524797 DPF2Q92785 391 aa14.15□□□□□ -0.14
TRAPPC4-204ENST00000524797 C9orf78Q9NZ63 289 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC4-204ENST00000524797 TMEM88BA6NKF7 163 aa14.14□□□□□ -0.15
TRAPPC4-204ENST00000524797 RPS12P25398 132 aaKnown RBP14.14□□□□□ -0.15
TRAPPC4-204ENST00000524797 ALDH1L2Q3SY69 923 aa14.14□□□□□ -0.15
TRAPPC4-204ENST00000524797 MICALL2Q8IY33 904 aa14.14□□□□□ -0.15
TRAPPC4-204ENST00000524797 TRPM4Q8TD43 1214 aa14.14□□□□□ -0.15
TRAPPC4-204ENST00000524797 MPHOSPH8Q99549 860 aa14.14□□□□□ -0.15
TRAPPC4-204ENST00000524797 H7C1D1 291 aa14.13□□□□□ -0.15
TRAPPC4-204ENST00000524797 VIL1P09327 827 aaKnown RBP14.13□□□□□ -0.15
TRAPPC4-204ENST00000524797 HIRAP54198 1017 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC4-204ENST00000524797 LMBR1LQ6UX01 489 aa14.13□□□□□ -0.15
TRAPPC4-204ENST00000524797 ANKRD2Q9GZV1 360 aa14.13□□□□□ -0.15
TRAPPC4-204ENST00000524797 PGAP2Q9UHJ9 254 aa14.13□□□□□ -0.15
TRAPPC4-204ENST00000524797 LEMD3Q9Y2U8 911 aa14.13□□□□□ -0.15
TRAPPC4-204ENST00000524797 CHMP3Q9Y3E7 222 aa14.13□□□□□ -0.15
TRAPPC4-204ENST00000524797 ZNF609O15014 1411 aa14.13□□□□□ -0.15
TRAPPC4-204ENST00000524797 CEP350Q5VT06 3117 aa14.13□□□□□ -0.15
TRAPPC4-204ENST00000524797 IFIT5Q13325 482 aaKnown RBP14.13□□□□□ -0.15
TRAPPC4-204ENST00000524797 DIEXFQ68CQ4 756 aaKnown RBP14.13□□□□□ -0.15
TRAPPC4-204ENST00000524797 MIER1Q8N108 512 aa14.13□□□□□ -0.15
TRAPPC4-204ENST00000524797 CNTNAP1P78357 1384 aa14.13□□□□□ -0.15
TRAPPC4-204ENST00000524797 UTYO14607 1347 aa14.12□□□□□ -0.15
TRAPPC4-204ENST00000524797 FMR1Q06787 632 aaKnown RBP eCLIP14.12□□□□□ -0.15
TRAPPC4-204ENST00000524797 SUCLG2Q96I99 432 aa14.12□□□□□ -0.15
TRAPPC4-204ENST00000524797 MKRN1Q9UHC7 482 aaKnown RBP14.12□□□□□ -0.15
TRAPPC4-204ENST00000524797 CT47B1P0C2W7 299 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC4-204ENST00000524797 CHRNDQ07001 517 aa14.11□□□□□ -0.15
TRAPPC4-204ENST00000524797 ZC3H15Q8WU90 426 aaKnown RBP14.11□□□□□ -0.15
TRAPPC4-204ENST00000524797 SMC4Q9NTJ3 1288 aa14.11□□□□□ -0.15
TRAPPC4-204ENST00000524797 ZNF804BA4D1E1 1349 aa14.11□□□□□ -0.15
TRAPPC4-204ENST00000524797 TRAF5O00463 557 aa14.11□□□□□ -0.15
TRAPPC4-204ENST00000524797 RSBN1LQ6PCB5 846 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC4-204ENST00000524797 SAMD7Q7Z3H4 446 aa14.11□□□□□ -0.15
TRAPPC4-204ENST00000524797 PODNQ7Z5L7 613 aa14.11□□□□□ -0.15
TRAPPC4-204ENST00000524797 KAZALD1Q96I82 304 aa14.11□□□□□ -0.15
TRAPPC4-204ENST00000524797 NBPF7P0C2Y1 421 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC4-204ENST00000524797 CCDC57Q2TAC2 916 aa14.1□□□□□ -0.15
TRAPPC4-204ENST00000524797 TBC1D10BQ4KMP7 808 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC4-204ENST00000524797 TXNRD3Q86VQ6 643 aa14.1□□□□□ -0.15
TRAPPC4-204ENST00000524797 ZNF594Q96JF6 807 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC4-204ENST00000524797 USP17L3A6NCW0 530 aa14.09□□□□□ -0.15
TRAPPC4-204ENST00000524797 USP17L4A6NCW7 530 aa14.09□□□□□ -0.15
TRAPPC4-204ENST00000524797 EGFRP00533 1210 aa14.09□□□□□ -0.15
TRAPPC4-204ENST00000524797 KLRK1P26718 216 aa14.09□□□□□ -0.15
TRAPPC4-204ENST00000524797 USP17L1Q7RTZ2 530 aa14.09□□□□□ -0.15
TRAPPC4-204ENST00000524797 AGBL3Q8NEM8 1001 aa14.09□□□□□ -0.15
TRAPPC4-204ENST00000524797 GMLQ99445 158 aa14.09□□□□□ -0.15
TRAPPC4-204ENST00000524797 GLIS2Q9BZE0 524 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC4-204ENST00000524797 COA1Q9GZY4 146 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms