RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 FAM227BQ96M60 508 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 SCAND2PQ9GZW5 306 aaPredicted RBP6.49□□□□□ -1.37
CLINT1-208ENST00000524306 TLR7Q9NYK1 1049 aaKnown RBP6.49□□□□□ -1.37
CLINT1-208ENST00000524306 TPCN1Q9ULQ1 816 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.49□□□□□ -1.37
CLINT1-208ENST00000524306 DDX60Q8IY21 1712 aaKnown RBP6.49□□□□□ -1.37
CLINT1-208ENST00000524306 SYCE3A1L190 88 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 CAVIN2O95810 425 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 IL2RBP14784 551 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 TFCP2Q12800 502 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 AIMP1Q12904 312 aaKnown RBP6.49□□□□□ -1.37
CLINT1-208ENST00000524306 ZMYM1Q5SVZ6 1142 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.49□□□□□ -1.37
CLINT1-208ENST00000524306 BARGINQ6ZT62 677 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 SMARCC2Q8TAQ2 1214 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 CCDC8Q9H0W5 538 aaPredicted RBP6.49□□□□□ -1.37
CLINT1-208ENST00000524306 ZSCAN16Q9H4T2 348 aaPredicted RBP6.49□□□□□ -1.37
CLINT1-208ENST00000524306 ZKSCAN5Q9Y2L8 839 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 ARAP2Q8WZ64 1704 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 SCN7AQ01118 1682 aa6.48□□□□□ -1.37
CLINT1-208ENST00000524306 EYA2O00167 538 aa6.48□□□□□ -1.37
CLINT1-208ENST00000524306 LARGE1O95461 756 aa6.48□□□□□ -1.37
CLINT1-208ENST00000524306 TPM3P06753 285 aa6.48□□□□□ -1.37
CLINT1-208ENST00000524306 ZFYP08048 801 aaPredicted RBP6.48□□□□□ -1.37
CLINT1-208ENST00000524306 MYL6BP14649 208 aa6.48□□□□□ -1.37
CLINT1-208ENST00000524306 GTF3C6Q969F1 213 aa6.48□□□□□ -1.37
CLINT1-208ENST00000524306 BOLA2Q9H3K6 86 aa6.48□□□□□ -1.37
CLINT1-208ENST00000524306 RBM27Q9P2N5 1060 aaKnown RBP6.48□□□□□ -1.37
CLINT1-208ENST00000524306 USP25Q9UHP3 1055 aa6.48□□□□□ -1.37
CLINT1-208ENST00000524306 SPATA31A6Q5VVP1 1343 aa6.48□□□□□ -1.37
CLINT1-208ENST00000524306 PFKFB2O60825 505 aa6.48□□□□□ -1.37
CLINT1-208ENST00000524306 CSF1RP07333 972 aa6.48□□□□□ -1.37
CLINT1-208ENST00000524306 KRT85P78386 507 aa6.48□□□□□ -1.37
CLINT1-208ENST00000524306 NAA16Q6N069 864 aaPredicted RBP6.48□□□□□ -1.37
CLINT1-208ENST00000524306 UBE3BQ7Z3V4 1068 aa6.48□□□□□ -1.37
CLINT1-208ENST00000524306 CCDC83Q8IWF9 413 aa6.48□□□□□ -1.37
CLINT1-208ENST00000524306 AK7Q96M32 723 aa6.48□□□□□ -1.37
CLINT1-208ENST00000524306 NEK1Q96PY6 1258 aa6.48□□□□□ -1.37
CLINT1-208ENST00000524306 AKAP2Q9Y2D5 859 aa6.48□□□□□ -1.37
CLINT1-208ENST00000524306 ATRNO75882 1429 aa6.47□□□□□ -1.37
CLINT1-208ENST00000524306 PCCAP05165 728 aaPredicted RBP6.47□□□□□ -1.37
CLINT1-208ENST00000524306 MSNP26038 577 aaKnown RBP6.47□□□□□ -1.37
CLINT1-208ENST00000524306 HMGN5P82970 282 aaKnown RBP6.47□□□□□ -1.37
CLINT1-208ENST00000524306 EXOSC10Q01780 885 aaKnown RBP6.47□□□□□ -1.37
CLINT1-208ENST00000524306 TCIRG1Q13488 830 aa6.47□□□□□ -1.37
CLINT1-208ENST00000524306 GLIPR1L2Q4G1C9 344 aa6.47□□□□□ -1.37
CLINT1-208ENST00000524306 CNPY2Q9Y2B0 182 aa6.47□□□□□ -1.37
CLINT1-208ENST00000524306 KIF3AQ9Y496 699 aa6.47□□□□□ -1.37
CLINT1-208ENST00000524306 COL24A1Q17RW2 1714 aa6.47□□□□□ -1.37
CLINT1-208ENST00000524306 GADD45BO75293 160 aaPredicted RBP6.47□□□□□ -1.37
CLINT1-208ENST00000524306 LMBR1LQ6UX01 489 aa6.47□□□□□ -1.37
CLINT1-208ENST00000524306 DHX32Q7L7V1 743 aaKnown RBP6.47□□□□□ -1.37
CLINT1-208ENST00000524306 ZNF589Q86UQ0 364 aaPredicted RBP6.47□□□□□ -1.37
CLINT1-208ENST00000524306 ZNF274Q96GC6 653 aaPredicted RBP6.47□□□□□ -1.37
CLINT1-208ENST00000524306 PRDM11Q9NQV5 511 aa6.47□□□□□ -1.37
CLINT1-208ENST00000524306 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.47□□□□□ -1.37
CLINT1-208ENST00000524306 MYH3P11055 1940 aa6.47□□□□□ -1.37
CLINT1-208ENST00000524306 SBF2Q86WG5 1849 aa6.47□□□□□ -1.37
CLINT1-208ENST00000524306 KCNJ4P48050 445 aa6.46□□□□□ -1.37
CLINT1-208ENST00000524306 HSP90AB3PQ58FF7 597 aa6.46□□□□□ -1.37
CLINT1-208ENST00000524306 LARP1BQ659C4 914 aaKnown RBP6.46□□□□□ -1.37
CLINT1-208ENST00000524306 DBNDD2Q9BQY9 259 aa6.46□□□□□ -1.37
CLINT1-208ENST00000524306 DDX19AQ9NUU7 478 aaKnown RBP6.46□□□□□ -1.37
CLINT1-208ENST00000524306 PAG1Q9NWQ8 432 aa6.46□□□□□ -1.37
CLINT1-208ENST00000524306 SALL1Q9NSC2 1324 aa6.46□□□□□ -1.37
CLINT1-208ENST00000524306 TOM1O60784 492 aa6.46□□□□□ -1.38
CLINT1-208ENST00000524306 SP7Q8TDD2 431 aaPredicted RBP6.46□□□□□ -1.38
CLINT1-208ENST00000524306 CTNNA3Q9UI47 895 aa6.46□□□□□ -1.38
CLINT1-208ENST00000524306 MYH15Q9Y2K3 1946 aa6.46□□□□□ -1.38
CLINT1-208ENST00000524306 RNF113AO15541 343 aaKnown RBP6.46□□□□□ -1.38
CLINT1-208ENST00000524306 ZBTB38Q8NAP3 1195 aaPredicted RBP6.46□□□□□ -1.38
CLINT1-208ENST00000524306 SIL1Q9H173 461 aa6.46□□□□□ -1.38
CLINT1-208ENST00000524306 ZMYM6O95789 1325 aa6.46□□□□□ -1.38
CLINT1-208ENST00000524306 CARMIL3Q8ND23 1372 aa6.46□□□□□ -1.38
CLINT1-208ENST00000524306 LAMA4Q16363 1823 aa6.45□□□□□ -1.38
CLINT1-208ENST00000524306 ERVV-1B6SEH8 477 aa6.45□□□□□ -1.38
CLINT1-208ENST00000524306 KDM4AO75164 1064 aa6.45□□□□□ -1.38
CLINT1-208ENST00000524306 CYP21A2P08686 494 aa6.45□□□□□ -1.38
CLINT1-208ENST00000524306 CCDC192P0DO97 292 aa6.45□□□□□ -1.38
CLINT1-208ENST00000524306 DNM1Q05193 864 aaKnown RBP6.45□□□□□ -1.38
CLINT1-208ENST00000524306 RESTQ13127 1097 aa6.45□□□□□ -1.38
CLINT1-208ENST00000524306 CFAP45Q9UL16 551 aa6.45□□□□□ -1.38
CLINT1-208ENST00000524306 CTAGE5O15320 804 aa6.45□□□□□ -1.38
CLINT1-208ENST00000524306 CHRNA2Q15822 529 aa6.45□□□□□ -1.38
CLINT1-208ENST00000524306 SPATA31A1Q5TZJ5 1347 aa6.45□□□□□ -1.38
CLINT1-208ENST00000524306 TOM1L2Q6ZVM7 507 aa6.45□□□□□ -1.38
CLINT1-208ENST00000524306 NOL8Q76FK4 1167 aaKnown RBP6.45□□□□□ -1.38
CLINT1-208ENST00000524306 KLHDC4Q8TBB5 520 aa6.45□□□□□ -1.38
CLINT1-208ENST00000524306 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.45□□□□□ -1.38
CLINT1-208ENST00000524306 TAF1LQ8IZX4 1826 aa6.44□□□□□ -1.38
CLINT1-208ENST00000524306 RTL9Q8NET4 1388 aa6.44□□□□□ -1.38
CLINT1-208ENST00000524306 SPATA31A5Q5VU36 1347 aa6.44□□□□□ -1.38
CLINT1-208ENST00000524306 MAP3K15Q6ZN16 1313 aa6.44□□□□□ -1.38
CLINT1-208ENST00000524306 SPATA31A7Q8IWB4 1347 aa6.44□□□□□ -1.38
CLINT1-208ENST00000524306 CPA1P15085 419 aa6.44□□□□□ -1.38
CLINT1-208ENST00000524306 HMGB2P26583 209 aaKnown RBP6.44□□□□□ -1.38
CLINT1-208ENST00000524306 TTLL7Q6ZT98 887 aa6.44□□□□□ -1.38
CLINT1-208ENST00000524306 TTC6Q86TZ1 520 aa6.44□□□□□ -1.38
CLINT1-208ENST00000524306 CABLES1Q8TDN4 633 aa6.44□□□□□ -1.38
CLINT1-208ENST00000524306 TCHHQ07283 1943 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms