RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 ATP6V0A2Q9Y487 856 aa11□□□□□ -0.65
CTNNA1-242ENST00000524292 SCN4AP35499 1836 aa11□□□□□ -0.65
CTNNA1-242ENST00000524292 BBOX1O75936 387 aa10.99□□□□□ -0.65
CTNNA1-242ENST00000524292 ZNF853P0CG23 659 aa10.99□□□□□ -0.65
CTNNA1-242ENST00000524292 HOXB3P14651 431 aaPredicted RBP10.99□□□□□ -0.65
CTNNA1-242ENST00000524292 LMOD1P29536 600 aaPredicted RBP10.99□□□□□ -0.65
CTNNA1-242ENST00000524292 DOK7Q18PE1 504 aa10.99□□□□□ -0.65
CTNNA1-242ENST00000524292 EAPPQ56P03 285 aaPredicted RBP10.99□□□□□ -0.65
CTNNA1-242ENST00000524292 PAXIP1Q6ZW49 1069 aaPredicted RBP10.99□□□□□ -0.65
CTNNA1-242ENST00000524292 PNMA8AQ86V59 439 aaPredicted RBP10.99□□□□□ -0.65
CTNNA1-242ENST00000524292 NIM1KQ8IY84 436 aa10.99□□□□□ -0.65
CTNNA1-242ENST00000524292 SUPT20HQ8NEM7 779 aa10.99□□□□□ -0.65
CTNNA1-242ENST00000524292 ABCC4O15439 1325 aa10.99□□□□□ -0.65
CTNNA1-242ENST00000524292 PPIP5K2O43314 1243 aa10.98□□□□□ -0.65
CTNNA1-242ENST00000524292 ST18O60284 1047 aa10.98□□□□□ -0.65
CTNNA1-242ENST00000524292 EPHX2P34913 555 aa10.98□□□□□ -0.65
CTNNA1-242ENST00000524292 DPP8Q6V1X1 898 aaPredicted RBP10.98□□□□□ -0.65
CTNNA1-242ENST00000524292 TMC4Q7Z404 712 aa10.98□□□□□ -0.65
CTNNA1-242ENST00000524292 JMYQ8N9B5 988 aa10.98□□□□□ -0.65
CTNNA1-242ENST00000524292 VPS33BQ9H267 617 aa10.98□□□□□ -0.65
CTNNA1-242ENST00000524292 GJA3Q9Y6H8 435 aa10.98□□□□□ -0.65
CTNNA1-242ENST00000524292 HSP90B1P14625 803 aaKnown RBP10.97□□□□□ -0.65
CTNNA1-242ENST00000524292 GRAPQ13588 217 aa10.97□□□□□ -0.65
CTNNA1-242ENST00000524292 RIC3Q7Z5B4 369 aa10.97□□□□□ -0.65
CTNNA1-242ENST00000524292 GRAPLQ8TC17 118 aaPredicted RBP10.97□□□□□ -0.65
CTNNA1-242ENST00000524292 ATP5J2-PTCD1G3V325 749 aa10.96□□□□□ -0.65
CTNNA1-242ENST00000524292 ELL2O00472 640 aaPredicted RBP10.96□□□□□ -0.65
CTNNA1-242ENST00000524292 DDX58O95786 925 aaKnown RBP10.96□□□□□ -0.65
CTNNA1-242ENST00000524292 AOC3Q16853 763 aa10.96□□□□□ -0.65
CTNNA1-242ENST00000524292 IFFO2Q5TF58 517 aa10.96□□□□□ -0.65
CTNNA1-242ENST00000524292 CCDC30Q5VVM6 783 aa10.96□□□□□ -0.65
CTNNA1-242ENST00000524292 SP8Q8IXZ3 490 aa10.96□□□□□ -0.65
CTNNA1-242ENST00000524292 MPNDQ8N594 471 aa10.96□□□□□ -0.65
CTNNA1-242ENST00000524292 FAM89AQ96GI7 184 aa10.96□□□□□ -0.65
CTNNA1-242ENST00000524292 ISCA1Q9BUE6 129 aa10.96□□□□□ -0.65
CTNNA1-242ENST00000524292 GPHNQ9NQX3 736 aaPredicted RBP10.96□□□□□ -0.65
CTNNA1-242ENST00000524292 LAMB2P55268 1798 aa10.95□□□□□ -0.66
CTNNA1-242ENST00000524292 ANP32CO43423 234 aa10.95□□□□□ -0.66
CTNNA1-242ENST00000524292 TRIM28Q13263 835 aaKnown RBP10.95□□□□□ -0.66
CTNNA1-242ENST00000524292 ZNF428Q96B54 188 aa10.95□□□□□ -0.66
CTNNA1-242ENST00000524292 RTFDC1Q9BY42 306 aaPredicted RBP10.95□□□□□ -0.66
CTNNA1-242ENST00000524292 CRISPLD2Q9H0B8 497 aa10.95□□□□□ -0.66
CTNNA1-242ENST00000524292 PCNTO95613 3336 aa10.95□□□□□ -0.66
CTNNA1-242ENST00000524292 COL4A5P29400 1685 aa10.95□□□□□ -0.66
CTNNA1-242ENST00000524292 PASKQ96RG2 1323 aa10.94□□□□□ -0.66
CTNNA1-242ENST00000524292 IRS4O14654 1257 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-242ENST00000524292 RIMBP2O15034 1052 aa10.94□□□□□ -0.66
CTNNA1-242ENST00000524292 RTL5Q5HYW3 569 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-242ENST00000524292 SLC51AQ86UW1 340 aa10.94□□□□□ -0.66
CTNNA1-242ENST00000524292 ZNF710Q8N1W2 664 aa10.94□□□□□ -0.66
CTNNA1-242ENST00000524292 STK31Q9BXU1 1019 aa10.94□□□□□ -0.66
CTNNA1-242ENST00000524292 ZNRF3Q9ULT6 936 aa10.94□□□□□ -0.66
CTNNA1-242ENST00000524292 TMEM88BA6NKF7 163 aa10.93□□□□□ -0.66
CTNNA1-242ENST00000524292 SCNN1DP51172 638 aa10.93□□□□□ -0.66
CTNNA1-242ENST00000524292 KIAA2012Q0VF49 1180 aa10.93□□□□□ -0.66
CTNNA1-242ENST00000524292 SF3B3Q15393 1217 aaKnown RBP10.93□□□□□ -0.66
CTNNA1-242ENST00000524292 CCDC27Q2M243 656 aa10.93□□□□□ -0.66
CTNNA1-242ENST00000524292 CNTROBQ8N137 903 aa10.93□□□□□ -0.66
CTNNA1-242ENST00000524292 ZBTB38Q8NAP3 1195 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-242ENST00000524292 C8orf58Q8NAV2 365 aa10.93□□□□□ -0.66
CTNNA1-242ENST00000524292 CCDC191Q8NCU4 936 aa10.93□□□□□ -0.66
CTNNA1-242ENST00000524292 MYD88Q99836 296 aa10.93□□□□□ -0.66
CTNNA1-242ENST00000524292 PHAXQ9H814 394 aaKnown RBP10.93□□□□□ -0.66
CTNNA1-242ENST00000524292 MRS2Q9HD23 443 aa10.93□□□□□ -0.66
CTNNA1-242ENST00000524292 DDX60Q8IY21 1712 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-242ENST00000524292 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
CTNNA1-242ENST00000524292 FOXK1P85037 733 aa10.92□□□□□ -0.66
CTNNA1-242ENST00000524292 TNIP1Q15025 636 aa10.92□□□□□ -0.66
CTNNA1-242ENST00000524292 MAP1SQ66K74 1059 aaPredicted RBP10.92□□□□□ -0.66
CTNNA1-242ENST00000524292 USP50Q70EL3 339 aaPredicted RBP10.92□□□□□ -0.66
CTNNA1-242ENST00000524292 WWC1Q8IX03 1113 aa10.92□□□□□ -0.66
CTNNA1-242ENST00000524292 TSR2Q969E8 191 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-242ENST00000524292 CWC25Q9NXE8 425 aaPredicted RBP10.92□□□□□ -0.66
CTNNA1-242ENST00000524292 MKRN1Q9UHC7 482 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-242ENST00000524292 ADAMTSL1Q8N6G6 1762 aa10.92□□□□□ -0.66
CTNNA1-242ENST00000524292 CNTNAP1P78357 1384 aa10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 IL16Q14005 1332 aa10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 CDHR2Q9BYE9 1310 aa10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 ITGBL1O95965 494 aaPredicted RBP10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 PCCAP05165 728 aaPredicted RBP10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 PDE4AP27815 886 aa10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 EPS15P42566 896 aa10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 CXCL9Q07325 125 aa10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 NEXNQ0ZGT2 675 aa10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 CCDC152Q4G0S7 254 aa10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 CCDC184Q52MB2 194 aa10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 CIAPIN1Q6FI81 312 aa10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 CELF1Q92879 486 aaKnown RBP10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 EYA3Q99504 573 aa10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 METTL22Q9BUU2 404 aaPredicted RBP10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 BCL2L13Q9BXK5 485 aa10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 ADARB2Q9NS39 739 aaKnown RBP10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 GPRC5DQ9NZD1 345 aa10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 NSFL1CQ9UNZ2 370 aaKnown RBP10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 LRRC37AA6NMS7 1700 aa10.91□□□□□ -0.66
CTNNA1-242ENST00000524292 POTEMA6NI47 508 aa10.9□□□□□ -0.66
CTNNA1-242ENST00000524292 C6orf229H3BNL8 230 aa10.9□□□□□ -0.66
CTNNA1-242ENST00000524292 PDE8AO60658 829 aa10.9□□□□□ -0.66
CTNNA1-242ENST00000524292 RAD17O75943 681 aa10.9□□□□□ -0.66
CTNNA1-242ENST00000524292 HSPA1AP0DMV8 641 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms