RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, human

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-222	ENST00000524226	TTC41P	Q6P2S7	1318 aa		3.03	□□□□□ -1.92
PCM1-222	ENST00000524226	GLRX3	O76003	335 aa	Known RBP	3.03	□□□□□ -1.93
PCM1-222	ENST00000524226	CWF19L2	Q2TBE0	894 aa	Known RBP	3.03	□□□□□ -1.93
PCM1-222	ENST00000524226	RALYL	Q86SE5	291 aa	Known RBP	3.03	□□□□□ -1.93
PCM1-222	ENST00000524226	CCDC125	Q86Z20	511 aa		3.03	□□□□□ -1.93
PCM1-222	ENST00000524226	SIRT2	Q8IXJ6	389 aa		3.03	□□□□□ -1.93
PCM1-222	ENST00000524226		H0YIN7	160 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	CBFA2T2	O43439	604 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	MAP4K4	O95819	1239 aa	Predicted RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	SDS	P20132	328 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	CA8	P35219	290 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	DYDC1	Q8WWB3	177 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	ZNF496	Q96IT1	587 aa	Predicted RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	ZNF396	Q96N95	335 aa	Predicted RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	MPHOSPH8	Q99549	860 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	CCNL1	Q9UK58	526 aa	Predicted RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	KDM6A	O15550	1401 aa	Predicted RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	PNMA6E	A0A0J9YXQ4	647 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226		K7ELQ4	463 aa	Predicted RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	POLR3G	O15318	223 aa	Predicted RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	CYP27B1	O15528	508 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	SEC24B	O95487	1268 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	HMGB1	P09429	215 aa	Known RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	MCM3	P25205	808 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	STIM1	Q13586	685 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	DDX46	Q7L014	1031 aa	Known RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	FSD1	Q9BTV5	496 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	NYX	Q9GZU5	481 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	USP44	Q9H0E7	712 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	BICC1	Q9H694	974 aa	Known RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	THRAP3	Q9Y2W1	955 aa	Known RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	HEG1	Q9ULI3	1381 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	COL14A1	Q05707	1796 aa	Known RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	HSPA1L	P34931	641 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	PDE6B	P35913	854 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	CCDC57	Q2TAC2	916 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	NFXL1	Q6ZNB6	911 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	CCDC91	Q7Z6B0	441 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	OGFOD1	Q8N543	542 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	SSH3	Q8TE77	659 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	RBM17	Q96I25	401 aa	Known RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	SETDB2	Q96T68	719 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	WWC3	Q9ULE0	1092 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	AFF2	P51816	1311 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	RGPD5	Q99666	1765 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	ADCY9	O60503	1353 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	PRAMEF22	A3QJZ6	481 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	NEURL1B	A8MQ27	555 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	C6orf229	H3BNL8	230 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	LPXN	O60711	386 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	KIN	O60870	393 aa	Known RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	TRIM21	P19474	475 aa	Known RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	PROSER3	Q2NL68	480 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	AXDND1	Q5T1B0	1012 aa	Predicted RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	NOL8	Q76FK4	1167 aa	Known RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	EYA3	Q99504	573 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	ZBTB3	Q9H5J0	574 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	FOXD4L1	Q9NU39	408 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	STRC	Q7RTU9	1775 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	HMGB1P1	B2RPK0	211 aa	Predicted RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	STAMBP	O95630	424 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	NBPF7	P0C2Y1	421 aa	Predicted RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	GBP2	P32456	591 aa	Predicted RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	CETN2	P41208	172 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	NASP	P49321	788 aa	Predicted RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	RBM25	P49756	843 aa	Known RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	TTC39A	Q5SRH9	613 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	NBPF5P	Q86XG9	351 aa	Predicted RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	PPM1E	Q8WY54	764 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	EVI5L	Q96CN4	794 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	HOOK2	Q96ED9	719 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	SUCLG2	Q96I99	432 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	NEUROD6	Q96NK8	337 aa		3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	RBM27	Q9P2N5	1060 aa	Known RBP	3.02	□□□□□ -1.93
PCM1-222	ENST00000524226	SPATA31A6	Q5VVP1	1343 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	GOLGA6L10	A0A0M3HER8	536 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	ATP5J2-PTCD1	G3V325	749 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	GSPT1	P15170	499 aa	Known RBP	3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	TNNI2	P48788	182 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	POLA2	Q14181	598 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	GCKR	Q14397	625 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	CCDC158	Q5M9N0	1113 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	ZFYVE27	Q5T4F4	411 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	UBE3B	Q7Z3V4	1068 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	SNX21	Q969T3	373 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	DNAJC2	Q99543	621 aa	Known RBP	3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	SDF4	Q9BRK5	362 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	TMEM106C	Q9BVX2	250 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	TBC1D2	Q9BYX2	928 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	ECHDC1	Q9NTX5	307 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	TBC1D2B	Q9UPU7	963 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	PKD1L3	Q7Z443	1732 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	MRC1	P22897	1456 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	NHSL1	Q5SYE7	1610 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	ROBO1	Q9Y6N7	1651 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	NFKBIB	Q15653	356 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	SPATA24	Q86W54	205 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	OSBPL3	Q9H4L5	887 aa		3.01	□□□□□ -1.93
PCM1-222	ENST00000524226	ATF5	Q9Y2D1	282 aa	Predicted RBP	3.01	□□□□□ -1.93

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