RNA–Protein interactions for RNA: ENST00000523799.5

CCNC-215, Transcript of cyclin C, human

TSL 3 BASIC

Gene CCNC, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNC-215	ENST00000523799	MTHFSD	Q2M296	383 aa	Known RBP	11.3	□□□□□ -0.6
CCNC-215	ENST00000523799	CRY2	Q49AN0	593 aa		11.3	□□□□□ -0.6
CCNC-215	ENST00000523799	RNF166	Q96A37	237 aa	Predicted RBP	11.3	□□□□□ -0.6
CCNC-215	ENST00000523799	EMILIN3	Q9NT22	766 aa		11.3	□□□□□ -0.6
CCNC-215	ENST00000523799	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
CCNC-215	ENST00000523799	NPC1L1	Q9UHC9	1359 aa		11.29	□□□□□ -0.6
CCNC-215	ENST00000523799	KIF23	Q02241	960 aa	Predicted RBP	11.29	□□□□□ -0.6
CCNC-215	ENST00000523799	MORC1	Q86VD1	984 aa		11.29	□□□□□ -0.6
CCNC-215	ENST00000523799	POLR2A	P24928	1970 aa	Known RBP	11.28	□□□□□ -0.6
CCNC-215	ENST00000523799	PPIP5K2	O43314	1243 aa		11.28	□□□□□ -0.6
CCNC-215	ENST00000523799	HOXA10	P31260	410 aa	Predicted RBP	11.28	□□□□□ -0.6
CCNC-215	ENST00000523799	GMPS	P49915	693 aa	Predicted RBP	11.28	□□□□□ -0.6
CCNC-215	ENST00000523799	CXCL9	Q07325	125 aa		11.28	□□□□□ -0.6
CCNC-215	ENST00000523799	C2orf69	Q8N8R5	385 aa		11.28	□□□□□ -0.6
CCNC-215	ENST00000523799	NYX	Q9GZU5	481 aa		11.28	□□□□□ -0.6
CCNC-215	ENST00000523799	TMX4	Q9H1E5	349 aa	Predicted RBP	11.28	□□□□□ -0.6
CCNC-215	ENST00000523799	ZNRF3	Q9ULT6	936 aa		11.28	□□□□□ -0.6
CCNC-215	ENST00000523799	KIF7	Q2M1P5	1343 aa		11.28	□□□□□ -0.6
CCNC-215	ENST00000523799	CENPF	P49454	3210 aa		11.28	□□□□□ -0.6
CCNC-215	ENST00000523799	FAM177B	A6PVY3	158 aa		11.27	□□□□□ -0.61
CCNC-215	ENST00000523799	ZNF157	P51786	506 aa	Predicted RBP	11.27	□□□□□ -0.61
CCNC-215	ENST00000523799	RPGR	Q92834	1020 aa	Known RBP	11.27	□□□□□ -0.61
CCNC-215	ENST00000523799		A0A0C4DFX4	3053 aa		11.27	□□□□□ -0.61
CCNC-215	ENST00000523799	SZT2	Q5T011	3432 aa		11.26	□□□□□ -0.61
CCNC-215	ENST00000523799	HMOX1	P09601	288 aa		11.26	□□□□□ -0.61
CCNC-215	ENST00000523799	HIRA	P54198	1017 aa	Predicted RBP	11.26	□□□□□ -0.61
CCNC-215	ENST00000523799	TNIP1	Q15025	636 aa		11.26	□□□□□ -0.61
CCNC-215	ENST00000523799	AOC3	Q16853	763 aa		11.26	□□□□□ -0.61
CCNC-215	ENST00000523799	USP48	Q86UV5	1035 aa		11.26	□□□□□ -0.61
CCNC-215	ENST00000523799	SUPT20H	Q8NEM7	779 aa		11.26	□□□□□ -0.61
CCNC-215	ENST00000523799	CRAMP1	Q96RY5	1269 aa		11.26	□□□□□ -0.61
CCNC-215	ENST00000523799	CSRNP1	Q96S65	589 aa		11.26	□□□□□ -0.61
CCNC-215	ENST00000523799	BCL2L13	Q9BXK5	485 aa		11.26	□□□□□ -0.61
CCNC-215	ENST00000523799	GBA2	Q9HCG7	927 aa	Predicted RBP	11.26	□□□□□ -0.61
CCNC-215	ENST00000523799	HDAC9	Q9UKV0	1011 aa		11.26	□□□□□ -0.61
CCNC-215	ENST00000523799	GNAT3	A8MTJ3	354 aa		11.25	□□□□□ -0.61
CCNC-215	ENST00000523799		H7C1D1	291 aa		11.25	□□□□□ -0.61
CCNC-215	ENST00000523799	PPEF1	O14829	653 aa	Predicted RBP	11.25	□□□□□ -0.61
CCNC-215	ENST00000523799	NUDT7	P0C024	238 aa		11.25	□□□□□ -0.61
CCNC-215	ENST00000523799	FXR1	P51114	621 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
CCNC-215	ENST00000523799	E2F4	Q16254	413 aa		11.25	□□□□□ -0.61
CCNC-215	ENST00000523799	RBM17	Q96I25	401 aa	Known RBP	11.25	□□□□□ -0.61
CCNC-215	ENST00000523799	RIC1	Q4ADV7	1423 aa		11.25	□□□□□ -0.61
CCNC-215	ENST00000523799	NUP98	P52948	1817 aa		11.24	□□□□□ -0.61
CCNC-215	ENST00000523799	HTT	P42858	3142 aa		11.24	□□□□□ -0.61
CCNC-215	ENST00000523799	SLC10A3	P09131	477 aa		11.24	□□□□□ -0.61
CCNC-215	ENST00000523799	KRT26	Q7Z3Y9	468 aa		11.24	□□□□□ -0.61
CCNC-215	ENST00000523799	IL17RE	Q8NFR9	667 aa		11.24	□□□□□ -0.61
CCNC-215	ENST00000523799	TRPM4	Q8TD43	1214 aa		11.24	□□□□□ -0.61
CCNC-215	ENST00000523799	CNOT7	Q9UIV1	285 aa	Known RBP	11.24	□□□□□ -0.61
CCNC-215	ENST00000523799	USP16	Q9Y5T5	823 aa		11.24	□□□□□ -0.61
CCNC-215	ENST00000523799	BRCA2	P51587	3418 aa		11.23	□□□□□ -0.61
CCNC-215	ENST00000523799	TBC1D12	O60347	775 aa		11.23	□□□□□ -0.61
CCNC-215	ENST00000523799	PIP4K2A	P48426	406 aa	Predicted RBP	11.23	□□□□□ -0.61
CCNC-215	ENST00000523799	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.23	□□□□□ -0.61
CCNC-215	ENST00000523799	POLR3GL	Q9BT43	218 aa		11.23	□□□□□ -0.61
CCNC-215	ENST00000523799	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.23	□□□□□ -0.61
CCNC-215	ENST00000523799	PANK3	Q9H999	370 aa		11.23	□□□□□ -0.61
CCNC-215	ENST00000523799	ABCC12	Q96J65	1359 aa		11.23	□□□□□ -0.61
CCNC-215	ENST00000523799	BTBD11	A6QL63	1104 aa		11.22	□□□□□ -0.61
CCNC-215	ENST00000523799	SNRPA1	P09661	255 aa	Known RBP	11.22	□□□□□ -0.61
CCNC-215	ENST00000523799	NOM1	Q5C9Z4	860 aa	Known RBP	11.22	□□□□□ -0.61
CCNC-215	ENST00000523799	NUTM1	Q86Y26	1132 aa		11.22	□□□□□ -0.61
CCNC-215	ENST00000523799	GAS2L2	Q8NHY3	880 aa		11.22	□□□□□ -0.61
CCNC-215	ENST00000523799	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.22	□□□□□ -0.61
CCNC-215	ENST00000523799	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.22	□□□□□ -0.61
CCNC-215	ENST00000523799	ATP6V0A2	Q9Y487	856 aa		11.22	□□□□□ -0.61
CCNC-215	ENST00000523799	CEMIP	Q8WUJ3	1361 aa		11.21	□□□□□ -0.61
CCNC-215	ENST00000523799	TCERG1	O14776	1098 aa	Known RBP	11.21	□□□□□ -0.61
CCNC-215	ENST00000523799	RAD17	O75943	681 aa		11.21	□□□□□ -0.61
CCNC-215	ENST00000523799	KIAA2012	Q0VF49	1180 aa		11.21	□□□□□ -0.61
CCNC-215	ENST00000523799	HLF	Q16534	295 aa		11.21	□□□□□ -0.61
CCNC-215	ENST00000523799	DPF2	Q92785	391 aa		11.21	□□□□□ -0.61
CCNC-215	ENST00000523799	DCPS	Q96C86	337 aa	Known RBP	11.21	□□□□□ -0.61
CCNC-215	ENST00000523799	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.21	□□□□□ -0.62
CCNC-215	ENST00000523799	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.2	□□□□□ -0.62
CCNC-215	ENST00000523799	NBPF26	B4DH59	902 aa		11.2	□□□□□ -0.62
CCNC-215	ENST00000523799	ERVV-1	B6SEH8	477 aa		11.2	□□□□□ -0.62
CCNC-215	ENST00000523799	KCNQ3	O43525	872 aa		11.2	□□□□□ -0.62
CCNC-215	ENST00000523799	INTS3	Q68E01	1043 aa	Known RBP	11.2	□□□□□ -0.62
CCNC-215	ENST00000523799	NBPF10	Q6P3W6	841 aa	Known RBP	11.2	□□□□□ -0.62
CCNC-215	ENST00000523799	DPP8	Q6V1X1	898 aa	Predicted RBP	11.2	□□□□□ -0.62
CCNC-215	ENST00000523799	CUL9	Q8IWT3	2517 aa		11.2	□□□□□ -0.62
CCNC-215	ENST00000523799	CEP290	O15078	2479 aa		11.19	□□□□□ -0.62
CCNC-215	ENST00000523799	DLL1	O00548	723 aa		11.19	□□□□□ -0.62
CCNC-215	ENST00000523799	DIAPH1	O60610	1272 aa	Known RBP	11.19	□□□□□ -0.62
CCNC-215	ENST00000523799	DLK2	Q6UY11	383 aa		11.19	□□□□□ -0.62
CCNC-215	ENST00000523799	COL6A3	P12111	3177 aa		11.18	□□□□□ -0.62
CCNC-215	ENST00000523799	PRAMEF22	A3QJZ6	481 aa		11.18	□□□□□ -0.62
CCNC-215	ENST00000523799	ADM5	C9JUS6	153 aa		11.18	□□□□□ -0.62
CCNC-215	ENST00000523799	DPYSL4	O14531	572 aa		11.18	□□□□□ -0.62
CCNC-215	ENST00000523799	FKBP1B	P68106	108 aa		11.18	□□□□□ -0.62
CCNC-215	ENST00000523799	MAP3K9	P80192	1104 aa		11.18	□□□□□ -0.62
CCNC-215	ENST00000523799	SAMD7	Q7Z3H4	446 aa		11.18	□□□□□ -0.62
CCNC-215	ENST00000523799	RASAL3	Q86YV0	1011 aa		11.18	□□□□□ -0.62
CCNC-215	ENST00000523799	SULF1	Q8IWU6	871 aa		11.18	□□□□□ -0.62
CCNC-215	ENST00000523799	MPND	Q8N594	471 aa		11.18	□□□□□ -0.62
CCNC-215	ENST00000523799	NLRP3	Q96P20	1036 aa		11.18	□□□□□ -0.62
CCNC-215	ENST00000523799	LHX6	Q9UPM6	363 aa		11.18	□□□□□ -0.62
CCNC-215	ENST00000523799	KNSTRN	Q9Y448	316 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms