RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 GIMAP6Q6P9H5 292 aa13.41□□□□□ -0.26
TNPO1-213ENST00000523768 Q6ZUG5 572 aa13.41□□□□□ -0.26
TNPO1-213ENST00000523768 FERMT3Q86UX7 667 aa13.41□□□□□ -0.26
TNPO1-213ENST00000523768 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.41□□□□□ -0.26
TNPO1-213ENST00000523768 GOLIM4O00461 696 aa13.41□□□□□ -0.26
TNPO1-213ENST00000523768 TIMM10P62072 90 aa13.41□□□□□ -0.26
TNPO1-213ENST00000523768 STK3Q13188 491 aa13.41□□□□□ -0.26
TNPO1-213ENST00000523768 ISCA1Q9BUE6 129 aa13.41□□□□□ -0.26
TNPO1-213ENST00000523768 ZBTB3Q9H5J0 574 aa13.41□□□□□ -0.26
TNPO1-213ENST00000523768 SHANK3Q9BYB0 1731 aa13.4□□□□□ -0.26
TNPO1-213ENST00000523768 LRRC24Q50LG9 513 aa13.4□□□□□ -0.26
TNPO1-213ENST00000523768 SPEF2Q9C093 1822 aa13.4□□□□□ -0.26
TNPO1-213ENST00000523768 STOX1Q6ZVD7 989 aa13.4□□□□□ -0.26
TNPO1-213ENST00000523768 LLPHQ9BRT6 129 aaKnown RBP13.4□□□□□ -0.26
TNPO1-213ENST00000523768 USP25Q9UHP3 1055 aa13.4□□□□□ -0.26
TNPO1-213ENST00000523768 FBXO3Q9UK99 471 aa13.4□□□□□ -0.26
TNPO1-213ENST00000523768 KDM4AO75164 1064 aa13.39□□□□□ -0.27
TNPO1-213ENST00000523768 PTMAP06454 111 aaKnown RBP13.39□□□□□ -0.27
TNPO1-213ENST00000523768 TRIM28Q13263 835 aaKnown RBP13.39□□□□□ -0.27
TNPO1-213ENST00000523768 TPRNQ4KMQ1 711 aa13.39□□□□□ -0.27
TNPO1-213ENST00000523768 FAM173BQ6P4H8 233 aa13.39□□□□□ -0.27
TNPO1-213ENST00000523768 DHX32Q7L7V1 743 aaKnown RBP13.39□□□□□ -0.27
TNPO1-213ENST00000523768 SMARCC2Q8TAQ2 1214 aa13.39□□□□□ -0.27
TNPO1-213ENST00000523768 AGXT2Q9BYV1 514 aa13.39□□□□□ -0.27
TNPO1-213ENST00000523768 A0A1B0GUL7 405 aa13.39□□□□□ -0.27
TNPO1-213ENST00000523768 JAK2O60674 1132 aa13.39□□□□□ -0.27
TNPO1-213ENST00000523768 PFKFB2O60825 505 aa13.39□□□□□ -0.27
TNPO1-213ENST00000523768 ADCY5O95622 1261 aa13.39□□□□□ -0.27
TNPO1-213ENST00000523768 IFIT1P09914 478 aaKnown RBP13.39□□□□□ -0.27
TNPO1-213ENST00000523768 CCDC192P0DO97 292 aa13.38□□□□□ -0.27
TNPO1-213ENST00000523768 TCIRG1Q13488 830 aa13.38□□□□□ -0.27
TNPO1-213ENST00000523768 LEO1Q8WVC0 666 aaPredicted RBP13.38□□□□□ -0.27
TNPO1-213ENST00000523768 ZNF594Q96JF6 807 aaPredicted RBP13.38□□□□□ -0.27
TNPO1-213ENST00000523768 RNF113AO15541 343 aaKnown RBP13.38□□□□□ -0.27
TNPO1-213ENST00000523768 EXOSC10Q01780 885 aaKnown RBP13.38□□□□□ -0.27
TNPO1-213ENST00000523768 SCRN1Q12765 414 aa13.38□□□□□ -0.27
TNPO1-213ENST00000523768 RESTQ13127 1097 aa13.38□□□□□ -0.27
TNPO1-213ENST00000523768 BRF1Q92994 677 aa13.38□□□□□ -0.27
TNPO1-213ENST00000523768 SPATA32Q96LK8 384 aa13.38□□□□□ -0.27
TNPO1-213ENST00000523768 ZSCAN16Q9H4T2 348 aaPredicted RBP13.38□□□□□ -0.27
TNPO1-213ENST00000523768 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.38□□□□□ -0.279e-6■□□□□ 11.3
TNPO1-213ENST00000523768 HSPD1P10809 573 aaKnown RBP13.37□□□□□ -0.27
TNPO1-213ENST00000523768 HSP90B1P14625 803 aaKnown RBP13.37□□□□□ -0.27
TNPO1-213ENST00000523768 LIG1P18858 919 aa13.37□□□□□ -0.27
TNPO1-213ENST00000523768 NUP62CLQ9H1M0 184 aa13.37□□□□□ -0.27
TNPO1-213ENST00000523768 CEP126Q9P2H0 1117 aa13.37□□□□□ -0.27
TNPO1-213ENST00000523768 CCDC9Q9Y3X0 531 aaKnown RBP13.37□□□□□ -0.27
TNPO1-213ENST00000523768 MAST3O60307 1309 aa13.37□□□□□ -0.27
TNPO1-213ENST00000523768 HSPA2P54652 639 aa13.37□□□□□ -0.27
TNPO1-213ENST00000523768 PLA2G12BQ9BX93 195 aa13.37□□□□□ -0.27
TNPO1-213ENST00000523768 PUS3Q9BZE2 481 aaKnown RBP13.37□□□□□ -0.27
TNPO1-213ENST00000523768 DDX19AQ9NUU7 478 aaKnown RBP13.37□□□□□ -0.27
TNPO1-213ENST00000523768 LAMA4Q16363 1823 aa13.37□□□□□ -0.27
TNPO1-213ENST00000523768 ABCA3Q99758 1704 aa13.37□□□□□ -0.27
TNPO1-213ENST00000523768 MAP3K11Q16584 847 aa13.36□□□□□ -0.27
TNPO1-213ENST00000523768 CCDC57Q2TAC2 916 aa13.36□□□□□ -0.27
TNPO1-213ENST00000523768 VSIG10Q8N0Z9 540 aa13.36□□□□□ -0.27
TNPO1-213ENST00000523768 TEX13AQ9BXU3 409 aaPredicted RBP13.36□□□□□ -0.27
TNPO1-213ENST00000523768 SLAIN2Q9P270 581 aa13.36□□□□□ -0.27
TNPO1-213ENST00000523768 TFIP11Q9UBB9 837 aaKnown RBP13.36□□□□□ -0.27
TNPO1-213ENST00000523768 AKAP2Q9Y2D5 859 aa13.36□□□□□ -0.27
TNPO1-213ENST00000523768 PCCAP05165 728 aaPredicted RBP13.36□□□□□ -0.27
TNPO1-213ENST00000523768 LRRFIP1Q32MZ4 808 aaKnown RBP13.36□□□□□ -0.27
TNPO1-213ENST00000523768 SLFNL1Q499Z3 407 aa13.36□□□□□ -0.27
TNPO1-213ENST00000523768 RBM43Q6ZSC3 357 aaKnown RBP13.36□□□□□ -0.27
TNPO1-213ENST00000523768 NSUN7Q8NE18 718 aaKnown RBP13.36□□□□□ -0.27
TNPO1-213ENST00000523768 GOLGA6L4A6NEF3 574 aa13.35□□□□□ -0.27
TNPO1-213ENST00000523768 E7EWF7 191 aa13.35□□□□□ -0.27
TNPO1-213ENST00000523768 HMGN5P82970 282 aaKnown RBP13.35□□□□□ -0.27
TNPO1-213ENST00000523768 FGD1P98174 961 aa13.35□□□□□ -0.27
TNPO1-213ENST00000523768 KIAA2012Q0VF49 1180 aa13.35□□□□□ -0.27
TNPO1-213ENST00000523768 NAA16Q6N069 864 aaPredicted RBP13.35□□□□□ -0.27
TNPO1-213ENST00000523768 FBXL16Q8N461 479 aa13.35□□□□□ -0.27
TNPO1-213ENST00000523768 LRRC2Q9BYS8 371 aa13.35□□□□□ -0.27
TNPO1-213ENST00000523768 TMOD3Q9NYL9 352 aa13.35□□□□□ -0.27
TNPO1-213ENST00000523768 TOGARAM1Q9Y4F4 1720 aa13.35□□□□□ -0.27
TNPO1-213ENST00000523768 H3BQV1 296 aa13.35□□□□□ -0.27
TNPO1-213ENST00000523768 CSF1RP07333 972 aa13.35□□□□□ -0.27
TNPO1-213ENST00000523768 CCDC158Q5M9N0 1113 aa13.35□□□□□ -0.27
TNPO1-213ENST00000523768 IFFO2Q5TF58 517 aa13.35□□□□□ -0.27
TNPO1-213ENST00000523768 DACT1Q9NYF0 836 aa13.35□□□□□ -0.27
TNPO1-213ENST00000523768 FAM200AQ8TCP9 573 aa13.34□□□□□ -0.27
TNPO1-213ENST00000523768 CHMP4CQ96CF2 233 aa13.34□□□□□ -0.27
TNPO1-213ENST00000523768 ZNF274Q96GC6 653 aaPredicted RBP13.34□□□□□ -0.27
TNPO1-213ENST00000523768 PGBD1Q96JS3 809 aa13.34□□□□□ -0.27
TNPO1-213ENST00000523768 CFAP45Q9UL16 551 aa13.34□□□□□ -0.27
TNPO1-213ENST00000523768 KIF3AQ9Y496 699 aa13.34□□□□□ -0.27
TNPO1-213ENST00000523768 ABCC12Q96J65 1359 aa13.34□□□□□ -0.27
TNPO1-213ENST00000523768 CTDNEP1O95476 244 aa13.34□□□□□ -0.27
TNPO1-213ENST00000523768 ZFYP08048 801 aaPredicted RBP13.34□□□□□ -0.27
TNPO1-213ENST00000523768 EVA1CP58658 441 aa13.34□□□□□ -0.27
TNPO1-213ENST00000523768 CLSTN2Q9H4D0 955 aa13.34□□□□□ -0.27
TNPO1-213ENST00000523768 STRN4Q9NRL3 753 aa13.34□□□□□ -0.27
TNPO1-213ENST00000523768 R3HCC1Q9Y3T6 440 aaKnown RBP13.34□□□□□ -0.27
TNPO1-213ENST00000523768 M0R2C6 588 aa13.33□□□□□ -0.28
TNPO1-213ENST00000523768 TYRO3Q06418 890 aa13.33□□□□□ -0.28
TNPO1-213ENST00000523768 APOBRQ0VD83 1088 aa13.33□□□□□ -0.28
TNPO1-213ENST00000523768 ZBTB38Q8NAP3 1195 aaPredicted RBP13.33□□□□□ -0.28
TNPO1-213ENST00000523768 OSBP2Q969R2 916 aa13.33□□□□□ -0.28
TNPO1-213ENST00000523768 DDX11Q96FC9 970 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms