RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 DNAAF4Q8WXU2 420 aa9.85□□□□□ -0.83
FAM49B-227ENST00000523514 RBM17Q96I25 401 aaKnown RBP9.85□□□□□ -0.83
FAM49B-227ENST00000523514 PTPRCP08575 1304 aa9.84□□□□□ -0.83
FAM49B-227ENST00000523514 SLX4Q8IY92 1834 aa9.84□□□□□ -0.83
FAM49B-227ENST00000523514 C2orf72A6NCS6 295 aa9.84□□□□□ -0.83
FAM49B-227ENST00000523514 PCCAP05165 728 aaPredicted RBP9.84□□□□□ -0.83
FAM49B-227ENST00000523514 FOXK1P85037 733 aa9.84□□□□□ -0.83
FAM49B-227ENST00000523514 TMEM92Q6UXU6 159 aa9.84□□□□□ -0.83
FAM49B-227ENST00000523514 ARHGAP27Q6ZUM4 889 aa9.84□□□□□ -0.83
FAM49B-227ENST00000523514 L3MBTL3Q96JM7 780 aaPredicted RBP9.84□□□□□ -0.83
FAM49B-227ENST00000523514 CRAMP1Q96RY5 1269 aa9.84□□□□□ -0.83
FAM49B-227ENST00000523514 FER1L6Q2WGJ9 1857 aa9.84□□□□□ -0.83
FAM49B-227ENST00000523514 MYH3P11055 1940 aa9.84□□□□□ -0.83
FAM49B-227ENST00000523514 CDHR2Q9BYE9 1310 aa9.83□□□□□ -0.84
FAM49B-227ENST00000523514 NEURL1BA8MQ27 555 aa9.83□□□□□ -0.84
FAM49B-227ENST00000523514 IRS4O14654 1257 aaPredicted RBP9.83□□□□□ -0.84
FAM49B-227ENST00000523514 SEMA3EO15041 775 aa9.83□□□□□ -0.84
FAM49B-227ENST00000523514 GRIPAP1Q4V328 841 aa9.83□□□□□ -0.84
FAM49B-227ENST00000523514 CCDC93Q567U6 631 aa9.83□□□□□ -0.84
FAM49B-227ENST00000523514 CC2D2BQ6DHV5 1058 aa9.83□□□□□ -0.84
FAM49B-227ENST00000523514 LINS1Q8NG48 757 aa9.83□□□□□ -0.84
FAM49B-227ENST00000523514 TMC2Q8TDI7 906 aa9.83□□□□□ -0.84
FAM49B-227ENST00000523514 FAM89AQ96GI7 184 aa9.83□□□□□ -0.84
FAM49B-227ENST00000523514 DAXXQ9UER7 740 aaPredicted RBP9.83□□□□□ -0.84
FAM49B-227ENST00000523514 SBF1O95248 1867 aa9.83□□□□□ -0.84
FAM49B-227ENST00000523514 LTBP3Q9NS15 1303 aa9.82□□□□□ -0.84
FAM49B-227ENST00000523514 C21orf2O43822 256 aa9.82□□□□□ -0.84
FAM49B-227ENST00000523514 IGKV5-2P06315 115 aa9.82□□□□□ -0.84
FAM49B-227ENST00000523514 HCLS1P14317 486 aaPredicted RBP9.82□□□□□ -0.84
FAM49B-227ENST00000523514 SF3B3Q15393 1217 aaKnown RBP9.82□□□□□ -0.84
FAM49B-227ENST00000523514 DDX46Q7L014 1031 aaKnown RBP9.82□□□□□ -0.84
FAM49B-227ENST00000523514 TMC4Q7Z404 712 aa9.82□□□□□ -0.84
FAM49B-227ENST00000523514 MRPL50Q8N5N7 158 aaKnown RBP9.82□□□□□ -0.84
FAM49B-227ENST00000523514 SSH1Q8WYL5 1049 aa9.82□□□□□ -0.84
FAM49B-227ENST00000523514 TMX4Q9H1E5 349 aaPredicted RBP9.82□□□□□ -0.84
FAM49B-227ENST00000523514 EMILIN3Q9NT22 766 aa9.82□□□□□ -0.84
FAM49B-227ENST00000523514 SMC4Q9NTJ3 1288 aa9.82□□□□□ -0.84
FAM49B-227ENST00000523514 ZC3H4Q9UPT8 1303 aaKnown RBP9.82□□□□□ -0.84
FAM49B-227ENST00000523514 TESPA1A2RU30 521 aaPredicted RBP9.81□□□□□ -0.84
FAM49B-227ENST00000523514 G3V3G9 751 aa9.81□□□□□ -0.84
FAM49B-227ENST00000523514 PDE8AO60658 829 aa9.81□□□□□ -0.84
FAM49B-227ENST00000523514 BRPF1P55201 1214 aaPredicted RBP9.81□□□□□ -0.84
FAM49B-227ENST00000523514 GCKRQ14397 625 aa9.81□□□□□ -0.84
FAM49B-227ENST00000523514 CWF19L2Q2TBE0 894 aaKnown RBP9.81□□□□□ -0.84
FAM49B-227ENST00000523514 C3orf67Q6ZVT6 689 aa9.81□□□□□ -0.84
FAM49B-227ENST00000523514 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.81□□□□□ -0.84
FAM49B-227ENST00000523514 RTKN2Q8IZC4 609 aa9.81□□□□□ -0.84
FAM49B-227ENST00000523514 TAOK3Q9H2K8 898 aa9.81□□□□□ -0.84
FAM49B-227ENST00000523514 SCUBE2Q9NQ36 999 aa9.81□□□□□ -0.84
FAM49B-227ENST00000523514 DICER1Q9UPY3 1922 aaKnown RBP9.81□□□□□ -0.84
FAM49B-227ENST00000523514 TIAM2Q8IVF5 1701 aa9.81□□□□□ -0.84
FAM49B-227ENST00000523514 ABCC4O15439 1325 aa9.81□□□□□ -0.84
FAM49B-227ENST00000523514 KIF16BQ96L93 1317 aa9.81□□□□□ -0.84
FAM49B-227ENST00000523514 LRRC37AA6NMS7 1700 aa9.8□□□□□ -0.84
FAM49B-227ENST00000523514 NFKBIEO00221 500 aa9.8□□□□□ -0.84
FAM49B-227ENST00000523514 PPEF1O14829 653 aaPredicted RBP9.8□□□□□ -0.84
FAM49B-227ENST00000523514 ALDH1L1O75891 902 aa9.8□□□□□ -0.84
FAM49B-227ENST00000523514 BBOX1O75936 387 aa9.8□□□□□ -0.84
FAM49B-227ENST00000523514 LMNB1P20700 586 aa9.8□□□□□ -0.84
FAM49B-227ENST00000523514 GRAPQ13588 217 aa9.8□□□□□ -0.84
FAM49B-227ENST00000523514 CCDC152Q4G0S7 254 aa9.8□□□□□ -0.84
FAM49B-227ENST00000523514 RTL5Q5HYW3 569 aaPredicted RBP9.8□□□□□ -0.84
FAM49B-227ENST00000523514 BEND3Q5T5X7 828 aa9.8□□□□□ -0.84
FAM49B-227ENST00000523514 SYNE4Q8N205 404 aa9.8□□□□□ -0.84
FAM49B-227ENST00000523514 GRAPLQ8TC17 118 aaPredicted RBP9.8□□□□□ -0.84
FAM49B-227ENST00000523514 C7orf43Q8WVR3 580 aa9.8□□□□□ -0.84
FAM49B-227ENST00000523514 SRCIN1Q9C0H9 1055 aa9.8□□□□□ -0.84
FAM49B-227ENST00000523514 CCDC88AQ3V6T2 1871 aa9.8□□□□□ -0.84
FAM49B-227ENST00000523514 F6X3S4 739 aa9.79□□□□□ -0.84
FAM49B-227ENST00000523514 H7C1W4 665 aa9.79□□□□□ -0.84
FAM49B-227ENST00000523514 RARSP54136 660 aaKnown RBP9.79□□□□□ -0.84
FAM49B-227ENST00000523514 C9orf131Q5VYM1 1079 aa9.79□□□□□ -0.84
FAM49B-227ENST00000523514 SLC4A10Q6U841 1118 aa9.79□□□□□ -0.84
FAM49B-227ENST00000523514 UBE3BQ7Z3V4 1068 aa9.79□□□□□ -0.84
FAM49B-227ENST00000523514 PLPP6Q8IY26 295 aa9.79□□□□□ -0.84
FAM49B-227ENST00000523514 BCL2L13Q9BXK5 485 aa9.79□□□□□ -0.84
FAM49B-227ENST00000523514 API5Q9BZZ5 524 aaKnown RBP9.79□□□□□ -0.84
FAM49B-227ENST00000523514 RNF181Q9P0P0 153 aa9.79□□□□□ -0.84
FAM49B-227ENST00000523514 RTL9Q8NET4 1388 aa9.78□□□□□ -0.84
FAM49B-227ENST00000523514 CTSWP56202 376 aa9.78□□□□□ -0.84
FAM49B-227ENST00000523514 FKBP4Q02790 459 aaKnown RBP eCLIP9.78□□□□□ -0.84
FAM49B-227ENST00000523514 RASSF7Q02833 373 aa9.78□□□□□ -0.84
FAM49B-227ENST00000523514 HOMEZQ8IX15 550 aa9.78□□□□□ -0.84
FAM49B-227ENST00000523514 PSMD1Q99460 953 aa9.78□□□□□ -0.84
FAM49B-227ENST00000523514 PLA2G12BQ9BX93 195 aa9.78□□□□□ -0.84
FAM49B-227ENST00000523514 PLSCR2Q9NRY7 297 aa9.78□□□□□ -0.84
FAM49B-227ENST00000523514 ATP6V0A2Q9Y487 856 aa9.78□□□□□ -0.84
FAM49B-227ENST00000523514 SNED1Q8TER0 1413 aa9.78□□□□□ -0.84
FAM49B-227ENST00000523514 TAF1P21675 1872 aa9.77□□□□□ -0.85
FAM49B-227ENST00000523514 GRM8O00222 908 aa9.77□□□□□ -0.85
FAM49B-227ENST00000523514 IPO8O15397 1037 aaKnown RBP9.77□□□□□ -0.85
FAM49B-227ENST00000523514 CCT4P50991 539 aaKnown RBP9.77□□□□□ -0.85
FAM49B-227ENST00000523514 CASP7P55210 303 aa9.77□□□□□ -0.85
FAM49B-227ENST00000523514 SP8Q8IXZ3 490 aa9.77□□□□□ -0.85
FAM49B-227ENST00000523514 ZNF784Q8NCA9 323 aaPredicted RBP9.77□□□□□ -0.85
FAM49B-227ENST00000523514 SUPT20HQ8NEM7 779 aa9.77□□□□□ -0.85
FAM49B-227ENST00000523514 ARHGAP45Q92619 1136 aa9.77□□□□□ -0.85
FAM49B-227ENST00000523514 CDC5LQ99459 802 aaKnown RBP9.77□□□□□ -0.85
FAM49B-227ENST00000523514 C9orf78Q9NZ63 289 aaPredicted RBP9.77□□□□□ -0.85
FAM49B-227ENST00000523514 TTLL11Q8NHH1 800 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms