RNA–Protein interactions for RNA: ENST00000523155.1

IGKV3-25-201, Transcript of immunoglobulin kappa variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGKV3-25, Length 253 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-25-201ENST00000523155 BEND3Q5T5X7 828 aa11.32□□□□□ -0.6
IGKV3-25-201ENST00000523155 DNAJC5GQ8N7S2 189 aa11.32□□□□□ -0.6
IGKV3-25-201ENST00000523155 TBC1D16Q8TBP0 767 aa11.32□□□□□ -0.6
IGKV3-25-201ENST00000523155 GREM2Q9H772 168 aa11.32□□□□□ -0.6
IGKV3-25-201ENST00000523155 DBNDD1Q9H9R9 158 aa11.32□□□□□ -0.6
IGKV3-25-201ENST00000523155 GGA1Q9UJY5 639 aa11.32□□□□□ -0.6
IGKV3-25-201ENST00000523155 CLEC11AQ9Y240 323 aa11.32□□□□□ -0.6
IGKV3-25-201ENST00000523155 PASKQ96RG2 1323 aa11.32□□□□□ -0.6
IGKV3-25-201ENST00000523155 RIMBP2O15034 1052 aa11.31□□□□□ -0.6
IGKV3-25-201ENST00000523155 ECE2O60344 883 aa11.31□□□□□ -0.6
IGKV3-25-201ENST00000523155 FAM161AQ3B820 660 aa11.31□□□□□ -0.6
IGKV3-25-201ENST00000523155 USP50Q70EL3 339 aaPredicted RBP11.31□□□□□ -0.6
IGKV3-25-201ENST00000523155 GPR101Q96P66 508 aaPredicted RBP11.31□□□□□ -0.6
IGKV3-25-201ENST00000523155 BCL2L13Q9BXK5 485 aa11.31□□□□□ -0.6
IGKV3-25-201ENST00000523155 CREBZFQ9NS37 354 aa11.31□□□□□ -0.6
IGKV3-25-201ENST00000523155 ADARB2Q9NS39 739 aaKnown RBP11.31□□□□□ -0.6
IGKV3-25-201ENST00000523155 ZNF609O15014 1411 aa11.3□□□□□ -0.6
IGKV3-25-201ENST00000523155 ITGA6P23229 1130 aa11.3□□□□□ -0.6
IGKV3-25-201ENST00000523155 ATP2B4P23634 1241 aa11.3□□□□□ -0.6
IGKV3-25-201ENST00000523155 IGHMBP2P38935 993 aaKnown RBP11.3□□□□□ -0.6
IGKV3-25-201ENST00000523155 SLFN5Q08AF3 891 aa11.3□□□□□ -0.6
IGKV3-25-201ENST00000523155 MAP1SQ66K74 1059 aaPredicted RBP11.3□□□□□ -0.6
IGKV3-25-201ENST00000523155 ZC3H12CQ9C0D7 883 aaKnown RBP11.3□□□□□ -0.6
IGKV3-25-201ENST00000523155 BSDC1Q9NW68 430 aaPredicted RBP11.3□□□□□ -0.6
IGKV3-25-201ENST00000523155 MED23Q9ULK4 1368 aa11.29□□□□□ -0.6
IGKV3-25-201ENST00000523155 ARAP2Q8WZ64 1704 aa11.29□□□□□ -0.6
IGKV3-25-201ENST00000523155 THSD7BQ9C0I4 1608 aa11.29□□□□□ -0.6
IGKV3-25-201ENST00000523155 G3V3G9 751 aa11.29□□□□□ -0.6
IGKV3-25-201ENST00000523155 GRM8O00222 908 aa11.29□□□□□ -0.6
IGKV3-25-201ENST00000523155 PSMD14O00487 310 aa11.29□□□□□ -0.6
IGKV3-25-201ENST00000523155 ALDH1L1O75891 902 aa11.29□□□□□ -0.6
IGKV3-25-201ENST00000523155 ITGBL1O95965 494 aaPredicted RBP11.29□□□□□ -0.6
IGKV3-25-201ENST00000523155 DOK7Q18PE1 504 aa11.29□□□□□ -0.6
IGKV3-25-201ENST00000523155 DCAF8Q5TAQ9 597 aa11.29□□□□□ -0.6
IGKV3-25-201ENST00000523155 SLC4A10Q6U841 1118 aa11.29□□□□□ -0.6
IGKV3-25-201ENST00000523155 PTPRCP08575 1304 aa11.29□□□□□ -0.6
IGKV3-25-201ENST00000523155 ECM29Q5VYK3 1845 aa11.28□□□□□ -0.6
IGKV3-25-201ENST00000523155 CSF1RP07333 972 aa11.28□□□□□ -0.6
IGKV3-25-201ENST00000523155 RPS12P25398 132 aaKnown RBP11.28□□□□□ -0.6
IGKV3-25-201ENST00000523155 MICALL2Q8IY33 904 aa11.28□□□□□ -0.6
IGKV3-25-201ENST00000523155 CNTROBQ8N137 903 aa11.28□□□□□ -0.6
IGKV3-25-201ENST00000523155 MRPL50Q8N5N7 158 aaKnown RBP11.28□□□□□ -0.6
IGKV3-25-201ENST00000523155 JMYQ8N9B5 988 aa11.28□□□□□ -0.6
IGKV3-25-201ENST00000523155 CDCA7LQ96GN5 454 aa11.28□□□□□ -0.6
IGKV3-25-201ENST00000523155 SRCIN1Q9C0H9 1055 aa11.28□□□□□ -0.6
IGKV3-25-201ENST00000523155 MINPP1Q9UNW1 487 aa11.28□□□□□ -0.6
IGKV3-25-201ENST00000523155 CNTNAP1P78357 1384 aa11.28□□□□□ -0.6
IGKV3-25-201ENST00000523155 MYH13Q9UKX3 1938 aa11.27□□□□□ -0.6
IGKV3-25-201ENST00000523155 ANKRD18BA2A2Z9 1011 aa11.27□□□□□ -0.61
IGKV3-25-201ENST00000523155 TMEM88BA6NKF7 163 aa11.27□□□□□ -0.61
IGKV3-25-201ENST00000523155 CCT4P50991 539 aaKnown RBP11.27□□□□□ -0.61
IGKV3-25-201ENST00000523155 FOXO4P98177 505 aa11.27□□□□□ -0.61
IGKV3-25-201ENST00000523155 ALDH1L2Q3SY69 923 aa11.27□□□□□ -0.61
IGKV3-25-201ENST00000523155 TRPM4Q8TD43 1214 aa11.27□□□□□ -0.61
IGKV3-25-201ENST00000523155 SSH1Q8WYL5 1049 aa11.27□□□□□ -0.61
IGKV3-25-201ENST00000523155 DPF2Q92785 391 aa11.27□□□□□ -0.61
IGKV3-25-201ENST00000523155 MPHOSPH8Q99549 860 aa11.27□□□□□ -0.61
IGKV3-25-201ENST00000523155 C9orf78Q9NZ63 289 aaPredicted RBP11.27□□□□□ -0.61
IGKV3-25-201ENST00000523155 ZBTB12Q9Y330 459 aaPredicted RBP11.27□□□□□ -0.61
IGKV3-25-201ENST00000523155 CHMP3Q9Y3E7 222 aa11.27□□□□□ -0.61
IGKV3-25-201ENST00000523155 SHTN1A0MZ66 631 aa11.26□□□□□ -0.61
IGKV3-25-201ENST00000523155 H7C1D1 291 aa11.26□□□□□ -0.61
IGKV3-25-201ENST00000523155 CT47B1P0C2W7 299 aaPredicted RBP11.26□□□□□ -0.61
IGKV3-25-201ENST00000523155 IFIT5Q13325 482 aaKnown RBP11.26□□□□□ -0.61
IGKV3-25-201ENST00000523155 TRMT2AQ8IZ69 625 aaKnown RBP11.26□□□□□ -0.61
IGKV3-25-201ENST00000523155 ANKRD2Q9GZV1 360 aa11.26□□□□□ -0.61
IGKV3-25-201ENST00000523155 SMC4Q9NTJ3 1288 aa11.26□□□□□ -0.61
IGKV3-25-201ENST00000523155 CNOT7Q9UIV1 285 aaKnown RBP11.26□□□□□ -0.61
IGKV3-25-201ENST00000523155 LEMD3Q9Y2U8 911 aa11.26□□□□□ -0.61
IGKV3-25-201ENST00000523155 VIL1P09327 827 aaKnown RBP11.25□□□□□ -0.61
IGKV3-25-201ENST00000523155 CHRNDQ07001 517 aa11.25□□□□□ -0.61
IGKV3-25-201ENST00000523155 DIEXFQ68CQ4 756 aaKnown RBP11.25□□□□□ -0.61
IGKV3-25-201ENST00000523155 LMBR1LQ6UX01 489 aa11.25□□□□□ -0.61
IGKV3-25-201ENST00000523155 KCNQ5Q9NR82 932 aa11.25□□□□□ -0.61
IGKV3-25-201ENST00000523155 MKRN1Q9UHC7 482 aaKnown RBP11.25□□□□□ -0.61
IGKV3-25-201ENST00000523155 UTYO14607 1347 aa11.25□□□□□ -0.61
IGKV3-25-201ENST00000523155 KCNJ4P48050 445 aa11.24□□□□□ -0.61
IGKV3-25-201ENST00000523155 CCDC57Q2TAC2 916 aa11.24□□□□□ -0.61
IGKV3-25-201ENST00000523155 TAF7LQ5H9L4 462 aa11.24□□□□□ -0.61
IGKV3-25-201ENST00000523155 EPHA10Q5JZY3 1008 aa11.24□□□□□ -0.61
IGKV3-25-201ENST00000523155 RSBN1LQ6PCB5 846 aaPredicted RBP11.24□□□□□ -0.61
IGKV3-25-201ENST00000523155 PODNQ7Z5L7 613 aa11.24□□□□□ -0.61
IGKV3-25-201ENST00000523155 ZC3H15Q8WU90 426 aaKnown RBP11.24□□□□□ -0.61
IGKV3-25-201ENST00000523155 SUCLG2Q96I99 432 aa11.24□□□□□ -0.61
IGKV3-25-201ENST00000523155 COA1Q9GZY4 146 aa11.24□□□□□ -0.61
IGKV3-25-201ENST00000523155 ZNF804BA4D1E1 1349 aa11.24□□□□□ -0.61
IGKV3-25-201ENST00000523155 USP17L3A6NCW0 530 aa11.23□□□□□ -0.61
IGKV3-25-201ENST00000523155 USP17L4A6NCW7 530 aa11.23□□□□□ -0.61
IGKV3-25-201ENST00000523155 TRAF5O00463 557 aa11.23□□□□□ -0.61
IGKV3-25-201ENST00000523155 HIRAP54198 1017 aaPredicted RBP11.23□□□□□ -0.61
IGKV3-25-201ENST00000523155 KIF4BQ2VIQ3 1234 aa11.23□□□□□ -0.61
IGKV3-25-201ENST00000523155 TBC1D10BQ4KMP7 808 aaPredicted RBP11.23□□□□□ -0.61
IGKV3-25-201ENST00000523155 USP17L1Q7RTZ2 530 aa11.23□□□□□ -0.61
IGKV3-25-201ENST00000523155 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
IGKV3-25-201ENST00000523155 AGBL3Q8NEM8 1001 aa11.23□□□□□ -0.61
IGKV3-25-201ENST00000523155 GLIS2Q9BZE0 524 aaPredicted RBP11.23□□□□□ -0.61
IGKV3-25-201ENST00000523155 PGAP2Q9UHJ9 254 aa11.23□□□□□ -0.61
IGKV3-25-201ENST00000523155 ABT1Q9ULW3 272 aaKnown RBP11.23□□□□□ -0.61
IGKV3-25-201ENST00000523155 WTIPA6NIX2 430 aaPredicted RBP11.22□□□□□ -0.61
IGKV3-25-201ENST00000523155 RASSF10A6NK89 507 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms