RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 TXNRD3Q86VQ6 643 aa8.14□□□□□ -1.11
CLK4-213ENST00000523013 ABTB2Q8N961 1025 aa8.14□□□□□ -1.11
CLK4-213ENST00000523013 OR13H1Q8NG92 308 aa8.14□□□□□ -1.11
CLK4-213ENST00000523013 GHRHP01286 108 aa8.13□□□□□ -1.11
CLK4-213ENST00000523013 COL13A1Q5TAT6 717 aaPredicted RBP8.13□□□□□ -1.11
CLK4-213ENST00000523013 DYRK3O43781 588 aa8.12□□□□□ -1.11
CLK4-213ENST00000523013 PPP1R15AO75807 674 aaPredicted RBP8.11□□□□□ -1.11
CLK4-213ENST00000523013 GDF6Q6KF10 455 aaPredicted RBP8.11□□□□□ -1.11
CLK4-213ENST00000523013 ATCAYQ86WG3 371 aa8.11□□□□□ -1.11
CLK4-213ENST00000523013 HELQQ8TDG4 1101 aa8.11□□□□□ -1.11
CLK4-213ENST00000523013 SSBP4Q9BWG4 385 aaPredicted RBP8.11□□□□□ -1.11
CLK4-213ENST00000523013 USP21Q9UK80 565 aa8.11□□□□□ -1.11
CLK4-213ENST00000523013 FNDC3AQ9Y2H6 1198 aaKnown RBP8.11□□□□□ -1.11
CLK4-213ENST00000523013 DLL1O00548 723 aa8.1□□□□□ -1.11
CLK4-213ENST00000523013 SSFA2P28290 1259 aa8.1□□□□□ -1.11
CLK4-213ENST00000523013 XP32Q5T750 250 aa8.1□□□□□ -1.11
CLK4-213ENST00000523013 NUDT16Q96DE0 195 aaKnown RBP8.1□□□□□ -1.11
CLK4-213ENST00000523013 RBSNQ9H1K0 784 aa8.1□□□□□ -1.11
CLK4-213ENST00000523013 TRIM33Q9UPN9 1127 aa8.1□□□□□ -1.11
CLK4-213ENST00000523013 CYP2E1P05181 493 aaPredicted RBP8.09□□□□□ -1.11
CLK4-213ENST00000523013 IGF2-ASQ6U949 168 aa8.09□□□□□ -1.11
CLK4-213ENST00000523013 IL22RA1Q8N6P7 574 aa8.09□□□□□ -1.11
CLK4-213ENST00000523013 KIF4AO95239 1232 aa8.08□□□□□ -1.12
CLK4-213ENST00000523013 ATP11AP98196 1134 aa8.08□□□□□ -1.12
CLK4-213ENST00000523013 HYAL2Q12891 473 aa8.08□□□□□ -1.12
CLK4-213ENST00000523013 TTC39BQ5VTQ0 682 aaPredicted RBP8.08□□□□□ -1.12
CLK4-213ENST00000523013 Q8N3U1 123 aa8.08□□□□□ -1.12
CLK4-213ENST00000523013 WFDC12Q8WWY7 111 aa8.08□□□□□ -1.12
CLK4-213ENST00000523013 ELP3Q9H9T3 547 aa8.08□□□□□ -1.12
CLK4-213ENST00000523013 ABI2Q9NYB9 513 aaPredicted RBP8.08□□□□□ -1.12
CLK4-213ENST00000523013 TMEM63CQ9P1W3 806 aa8.08□□□□□ -1.12
CLK4-213ENST00000523013 H2AFB1P0C5Y9 115 aa8.07□□□□□ -1.12
CLK4-213ENST00000523013 H2AFB2P0C5Z0 115 aa8.07□□□□□ -1.12
CLK4-213ENST00000523013 NOS3P29474 1203 aa8.07□□□□□ -1.12
CLK4-213ENST00000523013 SETDB1Q15047 1291 aa8.07□□□□□ -1.12
CLK4-213ENST00000523013 FOXD4L6Q3SYB3 417 aaPredicted RBP8.07□□□□□ -1.12
CLK4-213ENST00000523013 PDE12Q6L8Q7 609 aaKnown RBP8.07□□□□□ -1.12
CLK4-213ENST00000523013 ADAMTSL4Q6UY14 1074 aa8.07□□□□□ -1.12
CLK4-213ENST00000523013 FOXD4L3Q6VB84 417 aaPredicted RBP8.07□□□□□ -1.12
CLK4-213ENST00000523013 GTF3C2Q8WUA4 911 aaPredicted RBP8.07□□□□□ -1.12
CLK4-213ENST00000523013 EDEM1Q92611 657 aa8.07□□□□□ -1.12
CLK4-213ENST00000523013 CARNS1A5YM72 827 aa8.06□□□□□ -1.12
CLK4-213ENST00000523013 MPSTP25325 297 aa8.06□□□□□ -1.12
CLK4-213ENST00000523013 IREB2P48200 963 aaKnown RBP8.06□□□□□ -1.12
CLK4-213ENST00000523013 PHLDB3Q6NSJ2 640 aa8.06□□□□□ -1.12
CLK4-213ENST00000523013 GGNBP2Q9H3C7 697 aa8.06□□□□□ -1.12
CLK4-213ENST00000523013 CNTN3Q9P232 1028 aa8.06□□□□□ -1.12
CLK4-213ENST00000523013 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.06□□□□□ -1.12
CLK4-213ENST00000523013 EIF1AXP47813 144 aaKnown RBP8.05□□□□□ -1.12
CLK4-213ENST00000523013 MTMR3Q13615 1198 aa8.05□□□□□ -1.12
CLK4-213ENST00000523013 NOM1Q5C9Z4 860 aaKnown RBP8.05□□□□□ -1.12
CLK4-213ENST00000523013 PRSS36Q5K4E3 855 aa8.05□□□□□ -1.12
CLK4-213ENST00000523013 XKR5Q6UX68 686 aa8.05□□□□□ -1.12
CLK4-213ENST00000523013 C14orf37Q86TY3 774 aa8.05□□□□□ -1.12
CLK4-213ENST00000523013 CACTIN-AS1Q8N1I8 211 aa8.05□□□□□ -1.12
CLK4-213ENST00000523013 CEP120Q8N960 986 aa8.05□□□□□ -1.12
CLK4-213ENST00000523013 TP53INP1Q96A56 240 aa8.05□□□□□ -1.12
CLK4-213ENST00000523013 RASSF4Q9H2L5 321 aa8.05□□□□□ -1.12
CLK4-213ENST00000523013 SRA1Q9HD15 236 aaKnown RBP8.05□□□□□ -1.12
CLK4-213ENST00000523013 PDGFAP04085 211 aa8.04□□□□□ -1.12
CLK4-213ENST00000523013 DNM1Q05193 864 aaKnown RBP8.04□□□□□ -1.12
CLK4-213ENST00000523013 ZMYM1Q5SVZ6 1142 aa8.04□□□□□ -1.12
CLK4-213ENST00000523013 CEP135Q66GS9 1140 aa8.04□□□□□ -1.12
CLK4-213ENST00000523013 ZNF438Q7Z4V0 828 aa8.04□□□□□ -1.12
CLK4-213ENST00000523013 MEGF10Q96KG7 1140 aa8.04□□□□□ -1.12
CLK4-213ENST00000523013 SPACA7Q96KW9 195 aa8.04□□□□□ -1.12
CLK4-213ENST00000523013 PPME1Q9Y570 386 aa8.04□□□□□ -1.12
CLK4-213ENST00000523013 A6NHS1 94 aa8.03□□□□□ -1.12
CLK4-213ENST00000523013 TM4SF5O14894 197 aa8.03□□□□□ -1.12
CLK4-213ENST00000523013 RPLP1P05386 114 aaKnown RBP8.03□□□□□ -1.12
CLK4-213ENST00000523013 NPR3P17342 541 aa8.03□□□□□ -1.12
CLK4-213ENST00000523013 MZF1P28698 734 aaPredicted RBP8.03□□□□□ -1.12
CLK4-213ENST00000523013 MAP4K3Q8IVH8 894 aa8.03□□□□□ -1.12
CLK4-213ENST00000523013 PBX4Q9BYU1 374 aa8.03□□□□□ -1.12
CLK4-213ENST00000523013 LACRTQ9GZZ8 138 aa8.03□□□□□ -1.12
CLK4-213ENST00000523013 MUC3BQ9H195 1237 aa8.03□□□□□ -1.12
CLK4-213ENST00000523013 KANSL3Q9P2N6 904 aa8.03□□□□□ -1.12
CLK4-213ENST00000523013 SMNDC1O75940 238 aaKnown RBP eCLIP8.02□□□□□ -1.13
CLK4-213ENST00000523013 NCAPG2Q86XI2 1143 aa8.02□□□□□ -1.13
CLK4-213ENST00000523013 TMEM130Q8N3G9 435 aa8.02□□□□□ -1.13
CLK4-213ENST00000523013 C1orf127Q8N9H9 656 aa8.02□□□□□ -1.13
CLK4-213ENST00000523013 GALNT11Q8NCW6 608 aa8.02□□□□□ -1.13
CLK4-213ENST00000523013 MRPL18Q9H0U6 180 aaKnown RBP8.02□□□□□ -1.13
CLK4-213ENST00000523013 AKTIPQ9H8T0 292 aa8.02□□□□□ -1.13
CLK4-213ENST00000523013 SALL4Q9UJQ4 1053 aa8.02□□□□□ -1.13
CLK4-213ENST00000523013 F8W735 103 aaPredicted RBP8.01□□□□□ -1.13
CLK4-213ENST00000523013 LINC01387J3KSC0 135 aa8.01□□□□□ -1.13
CLK4-213ENST00000523013 ALX3O95076 343 aa8.01□□□□□ -1.13
CLK4-213ENST00000523013 CDC27P30260 824 aa8.01□□□□□ -1.13
CLK4-213ENST00000523013 TXNDC11Q6PKC3 985 aa8.01□□□□□ -1.13
CLK4-213ENST00000523013 DZIP1LQ8IYY4 767 aaKnown RBP8.01□□□□□ -1.13
CLK4-213ENST00000523013 POP1Q99575 1024 aaKnown RBP8.01□□□□□ -1.13
CLK4-213ENST00000523013 CHRDQ9H2X0 955 aa8.01□□□□□ -1.13
CLK4-213ENST00000523013 ACPPP15309 386 aa8□□□□□ -1.13
CLK4-213ENST00000523013 C8orf34Q49A92 452 aa8□□□□□ -1.13
CLK4-213ENST00000523013 POLIQ9UNA4 740 aa8□□□□□ -1.13
CLK4-213ENST00000523013 NFKBIEO00221 500 aa7.99□□□□□ -1.13
CLK4-213ENST00000523013 PCSK2P16519 638 aa7.99□□□□□ -1.13
CLK4-213ENST00000523013 EPHA1P21709 976 aa7.99□□□□□ -1.13
CLK4-213ENST00000523013 ALKBH2Q6NS38 261 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms