RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 ZBTB38Q8NAP3 1195 aaPredicted RBP19.94■□□□□ 0.78
MRPS28-209ENST00000522987 TBC1D16Q8TBP0 767 aa19.94■□□□□ 0.78
MRPS28-209ENST00000522987 TSR2Q969E8 191 aaKnown RBP19.94■□□□□ 0.78
MRPS28-209ENST00000522987 PSME4Q14997 1843 aa19.93■□□□□ 0.78
MRPS28-209ENST00000522987 TRIM28Q13263 835 aaKnown RBP19.93■□□□□ 0.78
MRPS28-209ENST00000522987 CDHR2Q9BYE9 1310 aa19.93■□□□□ 0.78
MRPS28-209ENST00000522987 RTL9Q8NET4 1388 aa19.93■□□□□ 0.78
MRPS28-209ENST00000522987 UFL1O94874 794 aa19.92■□□□□ 0.78
MRPS28-209ENST00000522987 CALD1Q05682 793 aaKnown RBP19.92■□□□□ 0.78
MRPS28-209ENST00000522987 SAPCD2Q86UD0 394 aa19.92■□□□□ 0.78
MRPS28-209ENST00000522987 EYA3Q99504 573 aa19.92■□□□□ 0.78
MRPS28-209ENST00000522987 ANKIB1Q9P2G1 1089 aa19.92■□□□□ 0.78
MRPS28-209ENST00000522987 G3V3G9 751 aa19.91■□□□□ 0.78
MRPS28-209ENST00000522987 DCAF8Q5TAQ9 597 aa19.91■□□□□ 0.78
MRPS28-209ENST00000522987 CDC37L1Q7L3B6 337 aa19.91■□□□□ 0.78
MRPS28-209ENST00000522987 BEGAINQ9BUH8 593 aa19.91■□□□□ 0.78
MRPS28-209ENST00000522987 CWC25Q9NXE8 425 aaPredicted RBP19.91■□□□□ 0.78
MRPS28-209ENST00000522987 PGAP2Q9UHJ9 254 aa19.91■□□□□ 0.78
MRPS28-209ENST00000522987 MAP3K2Q9Y2U5 619 aa19.91■□□□□ 0.78
MRPS28-209ENST00000522987 ADM5C9JUS6 153 aa19.9■□□□□ 0.78
MRPS28-209ENST00000522987 PCCAP05165 728 aaPredicted RBP19.9■□□□□ 0.78
MRPS28-209ENST00000522987 CCDC30Q5VVM6 783 aa19.9■□□□□ 0.78
MRPS28-209ENST00000522987 METTL22Q9BUU2 404 aaPredicted RBP19.9■□□□□ 0.78
MRPS28-209ENST00000522987 ZC3H12CQ9C0D7 883 aaKnown RBP19.9■□□□□ 0.78
MRPS28-209ENST00000522987 PDE8AO60658 829 aa19.89■□□□□ 0.77
MRPS28-209ENST00000522987 ASTN2O75129 1339 aaPredicted RBP19.89■□□□□ 0.77
MRPS28-209ENST00000522987 CCDC152Q4G0S7 254 aa19.89■□□□□ 0.77
MRPS28-209ENST00000522987 CCDC191Q8NCU4 936 aa19.89■□□□□ 0.77
MRPS28-209ENST00000522987 ZC3H15Q8WU90 426 aaKnown RBP19.89■□□□□ 0.77
MRPS28-209ENST00000522987 WTIPA6NIX2 430 aaPredicted RBP19.88■□□□□ 0.77
MRPS28-209ENST00000522987 DDX58O95786 925 aaKnown RBP19.88■□□□□ 0.77
MRPS28-209ENST00000522987 DPF2Q92785 391 aa19.88■□□□□ 0.77
MRPS28-209ENST00000522987 ZIC5Q96T25 663 aa19.88■□□□□ 0.77
MRPS28-209ENST00000522987 GGA1Q9UJY5 639 aa19.88■□□□□ 0.77
MRPS28-209ENST00000522987 PI4KAP2A4QPH2 592 aa19.87■□□□□ 0.77
MRPS28-209ENST00000522987 G2E3Q7L622 706 aa19.87■□□□□ 0.77
MRPS28-209ENST00000522987 KRT26Q7Z3Y9 468 aa19.87■□□□□ 0.77
MRPS28-209ENST00000522987 PI4KAP1Q8N8J0 262 aa19.87■□□□□ 0.77
MRPS28-209ENST00000522987 IGKV5-2P06315 115 aa19.86■□□□□ 0.77
MRPS28-209ENST00000522987 HUNKP57058 714 aa19.86■□□□□ 0.77
MRPS28-209ENST00000522987 CWF19L2Q2TBE0 894 aaKnown RBP19.86■□□□□ 0.77
MRPS28-209ENST00000522987 KIF4BQ2VIQ3 1234 aa19.86■□□□□ 0.77
MRPS28-209ENST00000522987 ANKRD18AQ8IVF6 992 aa19.86■□□□□ 0.77
MRPS28-209ENST00000522987 SALL2Q9Y467 1007 aaPredicted RBP19.86■□□□□ 0.77
MRPS28-209ENST00000522987 AKAP11Q9UKA4 1901 aa19.85■□□□□ 0.77
MRPS28-209ENST00000522987 DCPSQ96C86 337 aaKnown RBP19.85■□□□□ 0.77
MRPS28-209ENST00000522987 ABHD8Q96I13 439 aa19.85■□□□□ 0.77
MRPS28-209ENST00000522987 GGA3Q9NZ52 723 aa19.85■□□□□ 0.77
MRPS28-209ENST00000522987 PODXL2Q9NZ53 605 aa19.85■□□□□ 0.77
MRPS28-209ENST00000522987 SCAF8Q9UPN6 1271 aaKnown RBP19.85■□□□□ 0.77
MRPS28-209ENST00000522987 ZNF646O15015 1829 aaPredicted RBP19.84■□□□□ 0.77
MRPS28-209ENST00000522987 RPS12P25398 132 aaKnown RBP19.84■□□□□ 0.77
MRPS28-209ENST00000522987 MAP2K2P36507 400 aa19.84■□□□□ 0.77
MRPS28-209ENST00000522987 CTSWP56202 376 aa19.84■□□□□ 0.77
MRPS28-209ENST00000522987 KSR2Q6VAB6 950 aa19.84■□□□□ 0.77
MRPS28-209ENST00000522987 STK31Q9BXU1 1019 aa19.84■□□□□ 0.77
MRPS28-209ENST00000522987 VIL1P09327 827 aaKnown RBP19.83■□□□□ 0.77
MRPS28-209ENST00000522987 HSP90B1P14625 803 aaKnown RBP19.83■□□□□ 0.77
MRPS28-209ENST00000522987 GREM2Q9H772 168 aa19.83■□□□□ 0.77
MRPS28-209ENST00000522987 CACNA1FO60840 1977 aa19.83■□□□□ 0.76
MRPS28-209ENST00000522987 XDHP47989 1333 aa19.82■□□□□ 0.76
MRPS28-209ENST00000522987 TWISTNBQ3B726 338 aaPredicted RBP19.82■□□□□ 0.76
MRPS28-209ENST00000522987 UBE3BQ7Z3V4 1068 aa19.82■□□□□ 0.76
MRPS28-209ENST00000522987 FBXW7Q969H0 707 aa19.82■□□□□ 0.76
MRPS28-209ENST00000522987 GBA2Q9HCG7 927 aaPredicted RBP19.82■□□□□ 0.76
MRPS28-209ENST00000522987 NEXNQ0ZGT2 675 aa19.81■□□□□ 0.76
MRPS28-209ENST00000522987 RSBN1LQ6PCB5 846 aaPredicted RBP19.81■□□□□ 0.76
MRPS28-209ENST00000522987 WWC1Q8IX03 1113 aa19.81■□□□□ 0.76
MRPS28-209ENST00000522987 TTLL11Q8NHH1 800 aa19.81■□□□□ 0.76
MRPS28-209ENST00000522987 MXD3Q9BW11 206 aa19.81■□□□□ 0.76
MRPS28-209ENST00000522987 CCDC85CA6NKD9 419 aa19.8■□□□□ 0.76
MRPS28-209ENST00000522987 NEURL1BA8MQ27 555 aa19.8■□□□□ 0.76
MRPS28-209ENST00000522987 SLC4A2P04920 1241 aa19.8■□□□□ 0.76
MRPS28-209ENST00000522987 ANGEL2Q5VTE6 544 aaKnown RBP19.8■□□□□ 0.76
MRPS28-209ENST00000522987 C2orf69Q8N8R5 385 aa19.8■□□□□ 0.76
MRPS28-209ENST00000522987 HHIPL1Q96JK4 782 aa19.8■□□□□ 0.76
MRPS28-209ENST00000522987 CDC5LQ99459 802 aaKnown RBP19.8■□□□□ 0.76
MRPS28-209ENST00000522987 ATP2B4P23634 1241 aa19.79■□□□□ 0.76
MRPS28-209ENST00000522987 SCARF1Q14162 830 aa19.79■□□□□ 0.76
MRPS28-209ENST00000522987 SULF1Q8IWU6 871 aa19.79■□□□□ 0.76
MRPS28-209ENST00000522987 MINPP1Q9UNW1 487 aa19.79■□□□□ 0.76
MRPS28-209ENST00000522987 BRPF1P55201 1214 aaPredicted RBP19.78■□□□□ 0.76
MRPS28-209ENST00000522987 RGMBQ6NW40 437 aa19.78■□□□□ 0.76
MRPS28-209ENST00000522987 CDCA5Q96FF9 252 aa19.78■□□□□ 0.76
MRPS28-209ENST00000522987 A0A1B0GUL6 1792 aa19.78■□□□□ 0.76
MRPS28-209ENST00000522987 ZNF157P51786 506 aaPredicted RBP19.77■□□□□ 0.76
MRPS28-209ENST00000522987 NOGQ13253 232 aa19.77■□□□□ 0.76
MRPS28-209ENST00000522987 MRS2Q9HD23 443 aa19.77■□□□□ 0.76
MRPS28-209ENST00000522987 USP17L3A6NCW0 530 aa19.76■□□□□ 0.75
MRPS28-209ENST00000522987 USP17L4A6NCW7 530 aa19.76■□□□□ 0.75
MRPS28-209ENST00000522987 FAM155AB1AL88 458 aaPredicted RBP19.76■□□□□ 0.75
MRPS28-209ENST00000522987 USP17L8P0C7I0 530 aa19.76■□□□□ 0.75
MRPS28-209ENST00000522987 FKBP5Q13451 457 aaPredicted RBP19.76■□□□□ 0.75
MRPS28-209ENST00000522987 PRAMEF18Q5VWM3 479 aa19.76■□□□□ 0.75
MRPS28-209ENST00000522987 USP17L1Q7RTZ2 530 aa19.76■□□□□ 0.75
MRPS28-209ENST00000522987 TXNRD3Q86VQ6 643 aa19.76■□□□□ 0.75
MRPS28-209ENST00000522987 AGBL3Q8NEM8 1001 aa19.76■□□□□ 0.75
MRPS28-209ENST00000522987 CHMP4AQ9BY43 222 aa19.76■□□□□ 0.75
MRPS28-209ENST00000522987 MYOZ2Q9NPC6 264 aa19.76■□□□□ 0.75
MRPS28-209ENST00000522987 FANCIQ9NVI1 1328 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms