RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 DNAAF4Q8WXU2 420 aa26.47■■□□□ 1.83
SDCBP-209ENST00000522243 KCNQ5Q9NR82 932 aa26.47■■□□□ 1.83
SDCBP-209ENST00000522243 ZBTB12Q9Y330 459 aaPredicted RBP26.47■■□□□ 1.83
SDCBP-209ENST00000522243 CNTNAP1P78357 1384 aa26.46■■□□□ 1.83
SDCBP-209ENST00000522243 H7C1W4 665 aa26.46■■□□□ 1.83
SDCBP-209ENST00000522243 PSMD14O00487 310 aa26.46■■□□□ 1.83
SDCBP-209ENST00000522243 HSPA1AP0DMV8 641 aaKnown RBP26.46■■□□□ 1.83
SDCBP-209ENST00000522243 HSPA1BP0DMV9 641 aaKnown RBP26.46■■□□□ 1.83
SDCBP-209ENST00000522243 GREM2Q9H772 168 aa26.46■■□□□ 1.83
SDCBP-209ENST00000522243 PODXL2Q9NZ53 605 aa26.46■■□□□ 1.83
SDCBP-209ENST00000522243 CNOT7Q9UIV1 285 aaKnown RBP26.46■■□□□ 1.83
SDCBP-209ENST00000522243 GCKRQ14397 625 aa26.45■■□□□ 1.82
SDCBP-209ENST00000522243 IFFO2Q5TF58 517 aa26.45■■□□□ 1.82
SDCBP-209ENST00000522243 ZC3H12CQ9C0D7 883 aaKnown RBP26.45■■□□□ 1.82
SDCBP-209ENST00000522243 MYH16Q9H6N6 1097 aa26.45■■□□□ 1.82
SDCBP-209ENST00000522243 GGA1Q9UJY5 639 aa26.45■■□□□ 1.82
SDCBP-209ENST00000522243 TRAF5O00463 557 aa26.44■■□□□ 1.82
SDCBP-209ENST00000522243 CDC5LQ99459 802 aaKnown RBP26.44■■□□□ 1.82
SDCBP-209ENST00000522243 HIRAP54198 1017 aaPredicted RBP26.43■■□□□ 1.82
SDCBP-209ENST00000522243 MICALL2Q8IY33 904 aa26.43■■□□□ 1.82
SDCBP-209ENST00000522243 TRPM4Q8TD43 1214 aa26.43■■□□□ 1.82
SDCBP-209ENST00000522243 F6X3S4 739 aa26.42■■□□□ 1.82
SDCBP-209ENST00000522243 G3V3G9 751 aa26.42■■□□□ 1.82
SDCBP-209ENST00000522243 DCAF8Q5TAQ9 597 aa26.42■■□□□ 1.82
SDCBP-209ENST00000522243 LINS1Q8NG48 757 aa26.42■■□□□ 1.82
SDCBP-209ENST00000522243 ABT1Q9ULW3 272 aaKnown RBP26.42■■□□□ 1.82
SDCBP-209ENST00000522243 RTL9Q8NET4 1388 aa26.42■■□□□ 1.82
SDCBP-209ENST00000522243 SCN9AQ15858 1988 aa26.42■■□□□ 1.82
SDCBP-209ENST00000522243 TRPM7Q96QT4 1865 aa26.41■■□□□ 1.82
SDCBP-209ENST00000522243 H7C1D1 291 aa26.41■■□□□ 1.82
SDCBP-209ENST00000522243 VEGFBP49765 207 aa26.41■■□□□ 1.82
SDCBP-209ENST00000522243 XDHP47989 1333 aa26.4■■□□□ 1.82
SDCBP-209ENST00000522243 CASP7P55210 303 aa26.4■■□□□ 1.82
SDCBP-209ENST00000522243 WTIPA6NIX2 430 aaPredicted RBP26.39■■□□□ 1.82
SDCBP-209ENST00000522243 DEFB115Q30KQ5 88 aa26.39■■□□□ 1.82
SDCBP-209ENST00000522243 COL13A1Q5TAT6 717 aaPredicted RBP26.39■■□□□ 1.82
SDCBP-209ENST00000522243 SAMD7Q7Z3H4 446 aa26.39■■□□□ 1.82
SDCBP-209ENST00000522243 GLIS2Q9BZE0 524 aaPredicted RBP26.39■■□□□ 1.82
SDCBP-209ENST00000522243 ATP2B4P23634 1241 aa26.38■■□□□ 1.81
SDCBP-209ENST00000522243 DPF2Q92785 391 aa26.38■■□□□ 1.81
SDCBP-209ENST00000522243 PLA2G12BQ9BX93 195 aa26.38■■□□□ 1.81
SDCBP-209ENST00000522243 BSDC1Q9NW68 430 aaPredicted RBP26.38■■□□□ 1.81
SDCBP-209ENST00000522243 MINPP1Q9UNW1 487 aa26.38■■□□□ 1.81
SDCBP-209ENST00000522243 RASSF10A6NK89 507 aa26.37■■□□□ 1.81
SDCBP-209ENST00000522243 FAM161AQ3B820 660 aa26.37■■□□□ 1.81
SDCBP-209ENST00000522243 RBM26Q5T8P6 1007 aaKnown RBP26.37■■□□□ 1.81
SDCBP-209ENST00000522243 CST9Q5W186 159 aa26.37■■□□□ 1.81
SDCBP-209ENST00000522243 PGAP2Q9UHJ9 254 aa26.37■■□□□ 1.81
SDCBP-209ENST00000522243 ZNF521Q96K83 1311 aa26.37■■□□□ 1.81
SDCBP-209ENST00000522243 ITGA6P23229 1130 aa26.36■■□□□ 1.81
SDCBP-209ENST00000522243 TBC1D10BQ4KMP7 808 aaPredicted RBP26.36■■□□□ 1.81
SDCBP-209ENST00000522243 EGFRP00533 1210 aa26.35■■□□□ 1.81
SDCBP-209ENST00000522243 IGHMBP2P38935 993 aaKnown RBP26.35■■□□□ 1.81
SDCBP-209ENST00000522243 BEND3Q5T5X7 828 aa26.35■■□□□ 1.81
SDCBP-209ENST00000522243 VIL1P09327 827 aaKnown RBP26.34■■□□□ 1.81
SDCBP-209ENST00000522243 RPS12P25398 132 aaKnown RBP26.34■■□□□ 1.81
SDCBP-209ENST00000522243 ZC3H15Q8WU90 426 aaKnown RBP26.34■■□□□ 1.81
SDCBP-209ENST00000522243 CSF1RP07333 972 aa26.33■■□□□ 1.81
SDCBP-209ENST00000522243 PAXIP1Q6ZW49 1069 aaPredicted RBP26.33■■□□□ 1.81
SDCBP-209ENST00000522243 PSME4Q14997 1843 aa26.32■■□□□ 1.8
SDCBP-209ENST00000522243 CELF2O95319 508 aaKnown RBP26.32■■□□□ 1.8
SDCBP-209ENST00000522243 CCT4P50991 539 aaKnown RBP26.32■■□□□ 1.8
SDCBP-209ENST00000522243 CDC37L1Q7L3B6 337 aa26.32■■□□□ 1.8
SDCBP-209ENST00000522243 ZNF408Q9H9D4 720 aa26.32■■□□□ 1.8
SDCBP-209ENST00000522243 WDR33Q9C0J8 1336 aaKnown RBP26.32■■□□□ 1.8
SDCBP-209ENST00000522243 POLR2AP24928 1970 aaKnown RBP26.31■■□□□ 1.8
SDCBP-209ENST00000522243 GRM1Q13255 1194 aa26.31■■□□□ 1.8
SDCBP-209ENST00000522243 SLC4A10Q6U841 1118 aa26.31■■□□□ 1.8
SDCBP-209ENST00000522243 DLK2Q6UY11 383 aa26.31■■□□□ 1.8
SDCBP-209ENST00000522243 USP48Q86UV5 1035 aa26.31■■□□□ 1.8
SDCBP-209ENST00000522243 MPHOSPH8Q99549 860 aa26.31■■□□□ 1.8
SDCBP-209ENST00000522243 CHMP3Q9Y3E7 222 aa26.3■■□□□ 1.8
SDCBP-209ENST00000522243 TLL2Q9Y6L7 1015 aa26.3■■□□□ 1.8
SDCBP-209ENST00000522243 MED23Q9ULK4 1368 aa26.3■■□□□ 1.8
SDCBP-209ENST00000522243 ANKRD18BA2A2Z9 1011 aa26.29■■□□□ 1.8
SDCBP-209ENST00000522243 FOXO4P98177 505 aa26.29■■□□□ 1.8
SDCBP-209ENST00000522243 KIF4BQ2VIQ3 1234 aa26.29■■□□□ 1.8
SDCBP-209ENST00000522243 RSBN1LQ6PCB5 846 aaPredicted RBP26.29■■□□□ 1.8
SDCBP-209ENST00000522243 FOXN1O15353 648 aa26.28■■□□□ 1.8
SDCBP-209ENST00000522243 CYP4F22Q6NT55 531 aa26.28■■□□□ 1.8
SDCBP-209ENST00000522243 PODNQ7Z5L7 613 aa26.28■■□□□ 1.8
SDCBP-209ENST00000522243 TXNRD3Q86VQ6 643 aa26.28■■□□□ 1.8
SDCBP-209ENST00000522243 CAPNS2Q96L46 248 aa26.28■■□□□ 1.8
SDCBP-209ENST00000522243 LEMD3Q9Y2U8 911 aa26.28■■□□□ 1.8
SDCBP-209ENST00000522243 USP17L3A6NCW0 530 aa26.27■■□□□ 1.8
SDCBP-209ENST00000522243 USP17L4A6NCW7 530 aa26.27■■□□□ 1.8
SDCBP-209ENST00000522243 EPHA10Q5JZY3 1008 aa26.27■■□□□ 1.8
SDCBP-209ENST00000522243 USP17L1Q7RTZ2 530 aa26.27■■□□□ 1.8
SDCBP-209ENST00000522243 AGBL3Q8NEM8 1001 aa26.27■■□□□ 1.8
SDCBP-209ENST00000522243 ZNF804BA4D1E1 1349 aa26.26■■□□□ 1.79
SDCBP-209ENST00000522243 GRM8O00222 908 aa26.26■■□□□ 1.79
SDCBP-209ENST00000522243 KLRK1P26718 216 aa26.26■■□□□ 1.79
SDCBP-209ENST00000522243 CHRNDQ07001 517 aa26.26■■□□□ 1.79
SDCBP-209ENST00000522243 FBXW7Q969H0 707 aa26.26■■□□□ 1.79
SDCBP-209ENST00000522243 DCPSQ96C86 337 aaKnown RBP26.26■■□□□ 1.79
SDCBP-209ENST00000522243 ANKRD2Q9GZV1 360 aa26.26■■□□□ 1.79
SDCBP-209ENST00000522243 C9orf78Q9NZ63 289 aaPredicted RBP26.26■■□□□ 1.79
SDCBP-209ENST00000522243 ASTN2O75129 1339 aaPredicted RBP26.25■■□□□ 1.79
SDCBP-209ENST00000522243 IFIT5Q13325 482 aaKnown RBP26.25■■□□□ 1.79
SDCBP-209ENST00000522243 LMBR1LQ6UX01 489 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms