RNA–Protein interactions for RNA: ENST00000522033.1

GLI4-208, Transcript of GLI family zinc finger 4, human

TSL 2

Gene GLI4, Length 615 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GLI4-208	ENST00000522033	XDH	P47989	1333 aa		29.17	■■■□□ 2.26
GLI4-208	ENST00000522033	RIMBP2	O15034	1052 aa		29.16	■■■□□ 2.26
GLI4-208	ENST00000522033	UFL1	O94874	794 aa		29.15	■■■□□ 2.26
GLI4-208	ENST00000522033	ITGA6	P23229	1130 aa		29.15	■■■□□ 2.26
GLI4-208	ENST00000522033	EAPP	Q56P03	285 aa	Predicted RBP	29.15	■■■□□ 2.26
GLI4-208	ENST00000522033	ATP2B4	P23634	1241 aa		29.14	■■■□□ 2.26
GLI4-208	ENST00000522033	CEP350	Q5VT06	3117 aa		29.14	■■■□□ 2.26
GLI4-208	ENST00000522033		G3V3G9	751 aa		29.13	■■■□□ 2.25
GLI4-208	ENST00000522033	SCNN1D	P51172	638 aa		29.13	■■■□□ 2.25
GLI4-208	ENST00000522033	DCAF8	Q5TAQ9	597 aa		29.13	■■■□□ 2.25
GLI4-208	ENST00000522033	MPHOSPH8	Q99549	860 aa		29.13	■■■□□ 2.25
GLI4-208	ENST00000522033	SMC4	Q9NTJ3	1288 aa		29.13	■■■□□ 2.25
GLI4-208	ENST00000522033	MINPP1	Q9UNW1	487 aa		29.13	■■■□□ 2.25
GLI4-208	ENST00000522033	CLEC11A	Q9Y240	323 aa		29.13	■■■□□ 2.25
GLI4-208	ENST00000522033	LTBP1	Q14766	1721 aa		29.13	■■■□□ 2.25
GLI4-208	ENST00000522033	ANKRD18B	A2A2Z9	1011 aa		29.12	■■■□□ 2.25
GLI4-208	ENST00000522033	RAD17	O75943	681 aa		29.12	■■■□□ 2.25
GLI4-208	ENST00000522033	POTEI	P0CG38	1075 aa		29.12	■■■□□ 2.25
GLI4-208	ENST00000522033	POTEJ	P0CG39	1038 aa		29.12	■■■□□ 2.25
GLI4-208	ENST00000522033	FOXO4	P98177	505 aa		29.11	■■■□□ 2.25
GLI4-208	ENST00000522033	IFIT5	Q13325	482 aa	Known RBP	29.11	■■■□□ 2.25
GLI4-208	ENST00000522033	FAM161A	Q3B820	660 aa		29.11	■■■□□ 2.25
GLI4-208	ENST00000522033	BCL2L13	Q9BXK5	485 aa		29.11	■■■□□ 2.25
GLI4-208	ENST00000522033	DBNDD1	Q9H9R9	158 aa		29.11	■■■□□ 2.25
GLI4-208	ENST00000522033	YDJC	A8MPS7	323 aa		29.1	■■■□□ 2.25
GLI4-208	ENST00000522033	EPS15	P42566	896 aa		29.1	■■■□□ 2.25
GLI4-208	ENST00000522033	USP50	Q70EL3	339 aa	Predicted RBP	29.1	■■■□□ 2.25
GLI4-208	ENST00000522033	GPRC5D	Q9NZD1	345 aa		29.1	■■■□□ 2.25
GLI4-208	ENST00000522033	ECE2	O60344	883 aa		29.09	■■■□□ 2.25
GLI4-208	ENST00000522033	ANKRD2	Q9GZV1	360 aa		29.09	■■■□□ 2.25
GLI4-208	ENST00000522033	CHMP3	Q9Y3E7	222 aa		29.09	■■■□□ 2.25
GLI4-208	ENST00000522033	GMPS	P49915	693 aa	Predicted RBP	29.08	■■■□□ 2.25
GLI4-208	ENST00000522033	DOK7	Q18PE1	504 aa		29.08	■■■□□ 2.25
GLI4-208	ENST00000522033	LMBR1L	Q6UX01	489 aa		29.08	■■■□□ 2.25
GLI4-208	ENST00000522033	ADARB2	Q9NS39	739 aa	Known RBP	29.08	■■■□□ 2.25
GLI4-208	ENST00000522033	BRPF1	P55201	1214 aa	Predicted RBP	29.07	■■■□□ 2.24
GLI4-208	ENST00000522033	GPR101	Q96P66	508 aa	Predicted RBP	29.07	■■■□□ 2.24
GLI4-208	ENST00000522033	LEMD3	Q9Y2U8	911 aa		29.07	■■■□□ 2.24
GLI4-208	ENST00000522033	UTY	O14607	1347 aa		29.06	■■■□□ 2.24
GLI4-208	ENST00000522033	CCT4	P50991	539 aa	Known RBP	29.06	■■■□□ 2.24
GLI4-208	ENST00000522033	CCDC57	Q2TAC2	916 aa		29.06	■■■□□ 2.24
GLI4-208	ENST00000522033	HNRNPU	Q00839	825 aa	Known RBP eCLIP	29.05	■■■□□ 2.24
GLI4-208	ENST00000522033	DPF2	Q92785	391 aa		29.05	■■■□□ 2.24
GLI4-208	ENST00000522033	SPEF2	Q9C093	1822 aa		29.04	■■■□□ 2.24
GLI4-208	ENST00000522033	PSMD14	O00487	310 aa		29.04	■■■□□ 2.24
GLI4-208	ENST00000522033	RPS12	P25398	132 aa	Known RBP	29.04	■■■□□ 2.24
GLI4-208	ENST00000522033	DNAJC5G	Q8N7S2	189 aa		29.04	■■■□□ 2.24
GLI4-208	ENST00000522033		H7C1D1	291 aa		29.03	■■■□□ 2.24
GLI4-208	ENST00000522033	TAF7L	Q5H9L4	462 aa		29.03	■■■□□ 2.24
GLI4-208	ENST00000522033	EPHA10	Q5JZY3	1008 aa		29.03	■■■□□ 2.24
GLI4-208	ENST00000522033	PODN	Q7Z5L7	613 aa		29.03	■■■□□ 2.24
GLI4-208	ENST00000522033	CNTROB	Q8N137	903 aa		29.03	■■■□□ 2.24
GLI4-208	ENST00000522033	CNOT7	Q9UIV1	285 aa	Known RBP	29.03	■■■□□ 2.24
GLI4-208	ENST00000522033	ADAMTSL1	Q8N6G6	1762 aa		29.03	■■■□□ 2.24
GLI4-208	ENST00000522033	MED23	Q9ULK4	1368 aa		29.02	■■■□□ 2.24
GLI4-208	ENST00000522033	NBPF7	P0C2Y1	421 aa	Predicted RBP	29.02	■■■□□ 2.24
GLI4-208	ENST00000522033	RARS	P54136	660 aa	Known RBP	29.02	■■■□□ 2.24
GLI4-208	ENST00000522033	API5	Q9BZZ5	524 aa	Known RBP	29.02	■■■□□ 2.24
GLI4-208	ENST00000522033	ITGBL1	O95965	494 aa	Predicted RBP	29.01	■■■□□ 2.23
GLI4-208	ENST00000522033	SUCLG2	Q96I99	432 aa		29.01	■■■□□ 2.23
GLI4-208	ENST00000522033	NOB1	Q9ULX3	412 aa	Known RBP	29.01	■■■□□ 2.23
GLI4-208	ENST00000522033	ZNF804B	A4D1E1	1349 aa		29	■■■□□ 2.23
GLI4-208	ENST00000522033	VIL1	P09327	827 aa	Known RBP	29	■■■□□ 2.23
GLI4-208	ENST00000522033	HTRA3	P83110	453 aa		29	■■■□□ 2.23
GLI4-208	ENST00000522033	CHRND	Q07001	517 aa		29	■■■□□ 2.23
GLI4-208	ENST00000522033	PASK	Q96RG2	1323 aa		28.99	■■■□□ 2.23
GLI4-208	ENST00000522033	KCNJ4	P48050	445 aa		28.99	■■■□□ 2.23
GLI4-208	ENST00000522033	MAP1S	Q66K74	1059 aa	Predicted RBP	28.99	■■■□□ 2.23
GLI4-208	ENST00000522033	LDHAL6A	Q6ZMR3	332 aa		28.99	■■■□□ 2.23
GLI4-208	ENST00000522033	KCNQ5	Q9NR82	932 aa		28.99	■■■□□ 2.23
GLI4-208	ENST00000522033	ZBTB12	Q9Y330	459 aa	Predicted RBP	28.99	■■■□□ 2.23
GLI4-208	ENST00000522033	KLRG1	Q96E93	195 aa		28.98	■■■□□ 2.23
GLI4-208	ENST00000522033	USP44	Q9H0E7	712 aa		28.98	■■■□□ 2.23
GLI4-208	ENST00000522033	CREBZF	Q9NS37	354 aa		28.98	■■■□□ 2.23
GLI4-208	ENST00000522033	KIF16B	Q96L93	1317 aa		28.97	■■■□□ 2.23
GLI4-208	ENST00000522033	MICALL2	Q8IY33	904 aa		28.97	■■■□□ 2.23
GLI4-208	ENST00000522033	ZC3H15	Q8WU90	426 aa	Known RBP	28.97	■■■□□ 2.23
GLI4-208	ENST00000522033	ARHGAP45	Q92619	1136 aa		28.97	■■■□□ 2.23
GLI4-208	ENST00000522033	KAZALD1	Q96I82	304 aa		28.97	■■■□□ 2.23
GLI4-208	ENST00000522033	COA1	Q9GZY4	146 aa		28.97	■■■□□ 2.23
GLI4-208	ENST00000522033	CNNM1	Q9NRU3	951 aa		28.97	■■■□□ 2.23
GLI4-208	ENST00000522033	USP17L3	A6NCW0	530 aa		28.95	■■■□□ 2.22
GLI4-208	ENST00000522033	USP17L4	A6NCW7	530 aa		28.95	■■■□□ 2.22
GLI4-208	ENST00000522033	WTIP	A6NIX2	430 aa	Predicted RBP	28.95	■■■□□ 2.22
GLI4-208	ENST00000522033	RABL6	Q3YEC7	729 aa	Predicted RBP	28.95	■■■□□ 2.22
GLI4-208	ENST00000522033	USP17L1	Q7RTZ2	530 aa		28.95	■■■□□ 2.22
GLI4-208	ENST00000522033	AGBL3	Q8NEM8	1001 aa		28.95	■■■□□ 2.22
GLI4-208	ENST00000522033	BICC1	Q9H694	974 aa	Known RBP	28.95	■■■□□ 2.22
GLI4-208	ENST00000522033	HDAC5	Q9UQL6	1122 aa		28.95	■■■□□ 2.22
GLI4-208	ENST00000522033	IPO8	O15397	1037 aa	Known RBP	28.94	■■■□□ 2.22
GLI4-208	ENST00000522033	RSBN1L	Q6PCB5	846 aa	Predicted RBP	28.94	■■■□□ 2.22
GLI4-208	ENST00000522033	ZNF594	Q96JF6	807 aa	Predicted RBP	28.94	■■■□□ 2.22
GLI4-208	ENST00000522033	PGAP2	Q9UHJ9	254 aa		28.94	■■■□□ 2.22
GLI4-208	ENST00000522033	TMEM88B	A6NKF7	163 aa		28.93	■■■□□ 2.22
GLI4-208	ENST00000522033	SCN9A	Q15858	1988 aa		28.93	■■■□□ 2.22
GLI4-208	ENST00000522033	TAF5L	O75529	589 aa		28.91	■■■□□ 2.22
GLI4-208	ENST00000522033	C15orf52	Q6ZUT6	534 aa	Known RBP	28.91	■■■□□ 2.22
GLI4-208	ENST00000522033	HELB	Q8NG08	1087 aa	Predicted RBP	28.91	■■■□□ 2.22
GLI4-208	ENST00000522033	ZNF609	O15014	1411 aa		28.91	■■■□□ 2.22
GLI4-208	ENST00000522033	HIRA	P54198	1017 aa	Predicted RBP	28.9	■■■□□ 2.22

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms