RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 ZNF277Q9NRM2 450 aaPredicted RBP11.9□□□□□ -0.5
CLK4-209ENST00000521621 ARAP2Q8WZ64 1704 aa11.9□□□□□ -0.5
CLK4-209ENST00000521621 EPHA10Q5JZY3 1008 aa11.9□□□□□ -0.5
CLK4-209ENST00000521621 OLFM4Q6UX06 510 aa11.9□□□□□ -0.5
CLK4-209ENST00000521621 FAM161AQ3B820 660 aa11.9□□□□□ -0.51
CLK4-209ENST00000521621 LMBR1LQ6UX01 489 aa11.9□□□□□ -0.51
CLK4-209ENST00000521621 NIM1KQ8IY84 436 aa11.9□□□□□ -0.51
CLK4-209ENST00000521621 POLLQ9UGP5 575 aa11.9□□□□□ -0.51
CLK4-209ENST00000521621 GGA1Q9UJY5 639 aa11.9□□□□□ -0.51
CLK4-209ENST00000521621 SRCAPQ6ZRS2 3230 aa11.89□□□□□ -0.51
CLK4-209ENST00000521621 FSTL1Q12841 308 aa11.89□□□□□ -0.51
CLK4-209ENST00000521621 BCL2L13Q9BXK5 485 aa11.89□□□□□ -0.51
CLK4-209ENST00000521621 MROH5Q6ZUA9 1318 aa11.89□□□□□ -0.51
CLK4-209ENST00000521621 IQCA1LA6NCM1 817 aa11.89□□□□□ -0.51
CLK4-209ENST00000521621 BCAR3O75815 825 aa11.89□□□□□ -0.51
CLK4-209ENST00000521621 CIAO1O76071 339 aa11.89□□□□□ -0.51
CLK4-209ENST00000521621 EIF6P56537 245 aaKnown RBP11.89□□□□□ -0.51
CLK4-209ENST00000521621 CCDC57Q2TAC2 916 aa11.89□□□□□ -0.51
CLK4-209ENST00000521621 RTL5Q5HYW3 569 aaPredicted RBP11.89□□□□□ -0.51
CLK4-209ENST00000521621 LARGE2Q8N3Y3 721 aa11.89□□□□□ -0.51
CLK4-209ENST00000521621 ZNF219Q9P2Y4 722 aaPredicted RBP11.89□□□□□ -0.51
CLK4-209ENST00000521621 POTECB2RU33 542 aa11.88□□□□□ -0.51
CLK4-209ENST00000521621 PPIP5K2O43314 1243 aa11.88□□□□□ -0.51
CLK4-209ENST00000521621 VEGFAP15692 232 aaPredicted RBP11.88□□□□□ -0.51
CLK4-209ENST00000521621 RPS12P25398 132 aaKnown RBP11.88□□□□□ -0.51
CLK4-209ENST00000521621 TNIP1Q15025 636 aa11.88□□□□□ -0.51
CLK4-209ENST00000521621 JARID2Q92833 1246 aaPredicted RBP11.88□□□□□ -0.51
CLK4-209ENST00000521621 RFX5P48382 616 aaPredicted RBP11.88□□□□□ -0.51
CLK4-209ENST00000521621 WASHC4Q2M389 1173 aa11.88□□□□□ -0.51
CLK4-209ENST00000521621 BICC1Q9H694 974 aaKnown RBP11.88□□□□□ -0.51
CLK4-209ENST00000521621 TOMM70O94826 608 aa11.87□□□□□ -0.51
CLK4-209ENST00000521621 UBTFL1P0CB47 393 aaPredicted RBP11.87□□□□□ -0.51
CLK4-209ENST00000521621 MPHOSPH8Q99549 860 aa11.87□□□□□ -0.51
CLK4-209ENST00000521621 RIPOR2Q9Y4F9 1068 aa11.87□□□□□ -0.51
CLK4-209ENST00000521621 ZNF541Q9H0D2 1346 aa11.87□□□□□ -0.51
CLK4-209ENST00000521621 FKBP1AP62942 108 aaKnown RBP11.87□□□□□ -0.51
CLK4-209ENST00000521621 PODNQ7Z5L7 613 aa11.87□□□□□ -0.51
CLK4-209ENST00000521621 DPF2Q92785 391 aa11.87□□□□□ -0.51
CLK4-209ENST00000521621 NSFL1CQ9UNZ2 370 aaKnown RBP11.87□□□□□ -0.51
CLK4-209ENST00000521621 AOC3Q16853 763 aa11.86□□□□□ -0.51
CLK4-209ENST00000521621 DZIP1LQ8IYY4 767 aaKnown RBP11.86□□□□□ -0.51
CLK4-209ENST00000521621 COA1Q9GZY4 146 aa11.86□□□□□ -0.51
CLK4-209ENST00000521621 CHMP4BQ9H444 224 aaKnown RBP11.86□□□□□ -0.51
CLK4-209ENST00000521621 UBE4AQ14139 1066 aa11.86□□□□□ -0.51
CLK4-209ENST00000521621 COPRSQ9NQ92 184 aa11.86□□□□□ -0.51
CLK4-209ENST00000521621 CHRNDQ07001 517 aa11.85□□□□□ -0.51
CLK4-209ENST00000521621 PDE3AQ14432 1141 aa11.85□□□□□ -0.51
CLK4-209ENST00000521621 ZC3H12CQ9C0D7 883 aaKnown RBP11.85□□□□□ -0.51
CLK4-209ENST00000521621 RCAN3Q9UKA8 241 aa11.85□□□□□ -0.51
CLK4-209ENST00000521621 ZNF804BA4D1E1 1349 aa11.85□□□□□ -0.51
CLK4-209ENST00000521621 UFL1O94874 794 aa11.85□□□□□ -0.51
CLK4-209ENST00000521621 VIL1P09327 827 aaKnown RBP11.85□□□□□ -0.51
CLK4-209ENST00000521621 PNMA8AQ86V59 439 aaPredicted RBP11.85□□□□□ -0.51
CLK4-209ENST00000521621 VGLL2Q8N8G2 317 aa11.85□□□□□ -0.51
CLK4-209ENST00000521621 ANKIB1Q9P2G1 1089 aa11.85□□□□□ -0.51
CLK4-209ENST00000521621 CIAPIN1Q6FI81 312 aa11.84□□□□□ -0.51
CLK4-209ENST00000521621 PGAP2Q9UHJ9 254 aa11.84□□□□□ -0.51
CLK4-209ENST00000521621 MYO3BQ8WXR4 1341 aa11.84□□□□□ -0.51
CLK4-209ENST00000521621 YDJCA8MPS7 323 aa11.84□□□□□ -0.51
CLK4-209ENST00000521621 ZBTB7BO15156 539 aaPredicted RBP11.84□□□□□ -0.51
CLK4-209ENST00000521621 C1QTNF8P60827 252 aa11.84□□□□□ -0.51
CLK4-209ENST00000521621 USP50Q70EL3 339 aaPredicted RBP11.84□□□□□ -0.51
CLK4-209ENST00000521621 HACL1Q9UJ83 578 aa11.84□□□□□ -0.51
CLK4-209ENST00000521621 GNAI2P04899 355 aa11.84□□□□□ -0.51
CLK4-209ENST00000521621 IL1R1P14778 569 aa11.84□□□□□ -0.51
CLK4-209ENST00000521621 CXCL9Q07325 125 aa11.84□□□□□ -0.51
CLK4-209ENST00000521621 LDHAL6AQ6ZMR3 332 aa11.84□□□□□ -0.51
CLK4-209ENST00000521621 AGBL3Q8NEM8 1001 aa11.84□□□□□ -0.51
CLK4-209ENST00000521621 RRAGCQ9HB90 399 aa11.84□□□□□ -0.51
CLK4-209ENST00000521621 NMRK2Q9NPI5 230 aa11.84□□□□□ -0.51
CLK4-209ENST00000521621 SCN9AQ15858 1988 aa11.83□□□□□ -0.51
CLK4-209ENST00000521621 C6orf229H3BNL8 230 aa11.83□□□□□ -0.52
CLK4-209ENST00000521621 ECE2O60344 883 aa11.83□□□□□ -0.52
CLK4-209ENST00000521621 PTPN12Q05209 780 aaKnown RBP11.83□□□□□ -0.52
CLK4-209ENST00000521621 SLC51AQ86UW1 340 aa11.83□□□□□ -0.52
CLK4-209ENST00000521621 TMEM57Q8N5G2 664 aa11.83□□□□□ -0.52
CLK4-209ENST00000521621 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.83□□□□□ -0.52
CLK4-209ENST00000521621 SMC1BQ8NDV3 1235 aa11.83□□□□□ -0.52
CLK4-209ENST00000521621 MEIS3Q99687 375 aa11.83□□□□□ -0.52
CLK4-209ENST00000521621 TAF1DQ9H5J8 278 aaPredicted RBP11.83□□□□□ -0.52
CLK4-209ENST00000521621 EYA2O00167 538 aa11.83□□□□□ -0.52
CLK4-209ENST00000521621 DDNO94850 711 aaPredicted RBP11.83□□□□□ -0.52
CLK4-209ENST00000521621 FGFR2P21802 821 aa11.82□□□□□ -0.52
CLK4-209ENST00000521621 SCNN1DP51172 638 aa11.82□□□□□ -0.52
CLK4-209ENST00000521621 POLA2Q14181 598 aa11.82□□□□□ -0.52
CLK4-209ENST00000521621 LDHDQ86WU2 507 aa11.82□□□□□ -0.52
CLK4-209ENST00000521621 ZC3H15Q8WU90 426 aaKnown RBP11.82□□□□□ -0.52
CLK4-209ENST00000521621 GPRC5DQ9NZD1 345 aa11.82□□□□□ -0.52
CLK4-209ENST00000521621 ZNF280AP59817 542 aaPredicted RBP11.82□□□□□ -0.52
CLK4-209ENST00000521621 TAF7LQ5H9L4 462 aa11.82□□□□□ -0.52
CLK4-209ENST00000521621 STRIP1Q5VSL9 837 aa11.82□□□□□ -0.52
CLK4-209ENST00000521621 CCDC85AQ96PX6 553 aaPredicted RBP11.82□□□□□ -0.52
CLK4-209ENST00000521621 GMLQ99445 158 aa11.82□□□□□ -0.52
CLK4-209ENST00000521621 LRRFIP2Q9Y608 721 aaKnown RBP11.82□□□□□ -0.52
CLK4-209ENST00000521621 IL15P40933 162 aaPredicted RBP11.81□□□□□ -0.52
CLK4-209ENST00000521621 FRAT1Q92837 279 aaPredicted RBP11.81□□□□□ -0.52
CLK4-209ENST00000521621 CNNM1Q9NRU3 951 aa11.81□□□□□ -0.52
CLK4-209ENST00000521621 ADARB2Q9NS39 739 aaKnown RBP11.81□□□□□ -0.52
CLK4-209ENST00000521621 ECM29Q5VYK3 1845 aa11.81□□□□□ -0.52
CLK4-209ENST00000521621 FAM205AQ6ZU69 1335 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms