RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 HOXA10P31260 410 aaPredicted RBP10.04□□□□□ -0.8
CTNNA1-227ENST00000521387 TPTE2Q6XPS3 522 aa10.04□□□□□ -0.8
CTNNA1-227ENST00000521387 ANKRD13DQ6ZTN6 518 aa10.04□□□□□ -0.8
CTNNA1-227ENST00000521387 DCPSQ96C86 337 aaKnown RBP10.04□□□□□ -0.8
CTNNA1-227ENST00000521387 VPS33BQ9H267 617 aa10.04□□□□□ -0.8
CTNNA1-227ENST00000521387 STAP2Q9UGK3 403 aa10.04□□□□□ -0.8
CTNNA1-227ENST00000521387 ZNF609O15014 1411 aa10.04□□□□□ -0.8
CTNNA1-227ENST00000521387 CACNA1AO00555 2505 aa10.03□□□□□ -0.8
CTNNA1-227ENST00000521387 ABCC12Q96J65 1359 aa10.03□□□□□ -0.8
CTNNA1-227ENST00000521387 FAM177BA6PVY3 158 aa10.03□□□□□ -0.8
CTNNA1-227ENST00000521387 MYCP01106 439 aaPredicted RBP10.03□□□□□ -0.8
CTNNA1-227ENST00000521387 TNIP1Q15025 636 aa10.03□□□□□ -0.8
CTNNA1-227ENST00000521387 GRIPAP1Q4V328 841 aa10.03□□□□□ -0.8
CTNNA1-227ENST00000521387 RBM26Q5T8P6 1007 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-227ENST00000521387 DZIP3Q86Y13 1208 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-227ENST00000521387 DPF2Q92785 391 aa10.03□□□□□ -0.8
CTNNA1-227ENST00000521387 CARD14Q9BXL6 1004 aa10.03□□□□□ -0.8
CTNNA1-227ENST00000521387 RTFDC1Q9BY42 306 aaPredicted RBP10.03□□□□□ -0.8
CTNNA1-227ENST00000521387 RNMTO43148 476 aaKnown RBP10.02□□□□□ -0.81
CTNNA1-227ENST00000521387 FKBP1BP68106 108 aa10.02□□□□□ -0.81
CTNNA1-227ENST00000521387 SLC4A8Q2Y0W8 1093 aa10.02□□□□□ -0.81
CTNNA1-227ENST00000521387 CLEC4GQ6UXB4 293 aa10.02□□□□□ -0.81
CTNNA1-227ENST00000521387 SNX27Q96L92 541 aa10.02□□□□□ -0.81
CTNNA1-227ENST00000521387 EFCC1Q9HA90 598 aa10.02□□□□□ -0.81
CTNNA1-227ENST00000521387 GGA3Q9NZ52 723 aa10.02□□□□□ -0.81
CTNNA1-227ENST00000521387 PIEZO1Q92508 2521 aa10.01□□□□□ -0.81
CTNNA1-227ENST00000521387 PPEF1O14829 653 aaPredicted RBP10.01□□□□□ -0.81
CTNNA1-227ENST00000521387 IRX5P78411 483 aaPredicted RBP10.01□□□□□ -0.81
CTNNA1-227ENST00000521387 KIAA2012Q0VF49 1180 aa10.01□□□□□ -0.81
CTNNA1-227ENST00000521387 SULF1Q8IWU6 871 aa10.01□□□□□ -0.81
CTNNA1-227ENST00000521387 ZNF496Q96IT1 587 aaPredicted RBP10.01□□□□□ -0.81
CTNNA1-227ENST00000521387 PTCH2Q9Y6C5 1203 aa10.01□□□□□ -0.81
CTNNA1-227ENST00000521387 KIF7Q2M1P5 1343 aa10.01□□□□□ -0.81
CTNNA1-227ENST00000521387 RIC1Q4ADV7 1423 aa10□□□□□ -0.81
CTNNA1-227ENST00000521387 PSMD14O00487 310 aa10□□□□□ -0.81
CTNNA1-227ENST00000521387 PIP4K2AP48426 406 aaPredicted RBP10□□□□□ -0.81
CTNNA1-227ENST00000521387 SREBF2Q12772 1141 aa10□□□□□ -0.81
CTNNA1-227ENST00000521387 C3orf67Q6ZVT6 689 aa10□□□□□ -0.81
CTNNA1-227ENST00000521387 ERO1AQ96HE7 468 aa10□□□□□ -0.81
CTNNA1-227ENST00000521387 GUCD1Q96NT3 240 aa10□□□□□ -0.81
CTNNA1-227ENST00000521387 CRAMP1Q96RY5 1269 aa10□□□□□ -0.81
CTNNA1-227ENST00000521387 SCAF8Q9UPN6 1271 aaKnown RBP10□□□□□ -0.81
CTNNA1-227ENST00000521387 NIP7Q9Y221 180 aaKnown RBP eCLIP10□□□□□ -0.81
CTNNA1-227ENST00000521387 UBR2Q8IWV8 1755 aa10□□□□□ -0.81
CTNNA1-227ENST00000521387 KIF20BQ96Q89 1820 aa10□□□□□ -0.81
CTNNA1-227ENST00000521387 IGF2BP3O00425 579 aaKnown RBP eCLIP9.99□□□□□ -0.81
CTNNA1-227ENST00000521387 PRAMEF18Q5VWM3 479 aa9.99□□□□□ -0.81
CTNNA1-227ENST00000521387 NUTM1Q86Y26 1132 aa9.99□□□□□ -0.81
CTNNA1-227ENST00000521387 SIN3AQ96ST3 1273 aa9.99□□□□□ -0.81
CTNNA1-227ENST00000521387 CARD11Q9BXL7 1154 aa9.99□□□□□ -0.81
CTNNA1-227ENST00000521387 KCNQ5Q9NR82 932 aa9.99□□□□□ -0.81
CTNNA1-227ENST00000521387 HEG1Q9ULI3 1381 aa9.99□□□□□ -0.81
CTNNA1-227ENST00000521387 HLFQ16534 295 aa9.98□□□□□ -0.81
CTNNA1-227ENST00000521387 KIF4BQ2VIQ3 1234 aa9.98□□□□□ -0.81
CTNNA1-227ENST00000521387 LRIT3Q3SXY7 679 aa9.98□□□□□ -0.81
CTNNA1-227ENST00000521387 SLC9C1Q4G0N8 1177 aa9.98□□□□□ -0.81
CTNNA1-227ENST00000521387 GDF15Q99988 308 aa9.98□□□□□ -0.81
CTNNA1-227ENST00000521387 ATP6V0A2Q9Y487 856 aa9.98□□□□□ -0.81
CTNNA1-227ENST00000521387 NR2E3Q9Y5X4 410 aa9.98□□□□□ -0.81
CTNNA1-227ENST00000521387 RPTORQ8N122 1335 aa9.98□□□□□ -0.81
CTNNA1-227ENST00000521387 KDM3BQ7LBC6 1761 aa9.98□□□□□ -0.81
CTNNA1-227ENST00000521387 ALDH1A1P00352 501 aa9.97□□□□□ -0.81
CTNNA1-227ENST00000521387 TNNT2P45379 298 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-227ENST00000521387 BCAMP50895 628 aa9.97□□□□□ -0.81
CTNNA1-227ENST00000521387 NUBP1P53384 320 aa9.97□□□□□ -0.81
CTNNA1-227ENST00000521387 PTPN12Q05209 780 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-227ENST00000521387 ANGEL2Q5VTE6 544 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-227ENST00000521387 SPRYD7Q5W111 196 aa9.97□□□□□ -0.81
CTNNA1-227ENST00000521387 SH3TC2Q8TF17 1288 aa9.97□□□□□ -0.81
CTNNA1-227ENST00000521387 TMEM121BQ9BXQ6 578 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-227ENST00000521387 BMP8BP34820 402 aa9.96□□□□□ -0.82
CTNNA1-227ENST00000521387 CRHR2Q13324 411 aa9.96□□□□□ -0.82
CTNNA1-227ENST00000521387 MTFR1Q15390 333 aa9.96□□□□□ -0.82
CTNNA1-227ENST00000521387 NBPF11Q86T75 865 aa9.96□□□□□ -0.82
CTNNA1-227ENST00000521387 PLCD3Q8N3E9 789 aa9.96□□□□□ -0.82
CTNNA1-227ENST00000521387 RPGRQ92834 1020 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-227ENST00000521387 SYNGAP1Q96PV0 1343 aa9.96□□□□□ -0.82
CTNNA1-227ENST00000521387 RTL9Q8NET4 1388 aa9.96□□□□□ -0.82
CTNNA1-227ENST00000521387 SP3Q02447 781 aa9.95□□□□□ -0.82
CTNNA1-227ENST00000521387 MAP3K12Q12852 859 aa9.95□□□□□ -0.82
CTNNA1-227ENST00000521387 NEUROD1Q13562 356 aa9.95□□□□□ -0.82
CTNNA1-227ENST00000521387 SCARF1Q14162 830 aa9.95□□□□□ -0.82
CTNNA1-227ENST00000521387 SULT6B1Q6IMI4 303 aa9.95□□□□□ -0.82
CTNNA1-227ENST00000521387 SUPT20HQ8NEM7 779 aa9.95□□□□□ -0.82
CTNNA1-227ENST00000521387 TEX13AQ9BXU3 409 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-227ENST00000521387 USP16Q9Y5T5 823 aa9.95□□□□□ -0.82
CTNNA1-227ENST00000521387 GTF2E1P29083 439 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-227ENST00000521387 LDLRAD1Q5T700 205 aa9.94□□□□□ -0.82
CTNNA1-227ENST00000521387 DPP8Q6V1X1 898 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-227ENST00000521387 RBM17Q96I25 401 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-227ENST00000521387 HTATIP2Q9BUP3 242 aa9.94□□□□□ -0.82
CTNNA1-227ENST00000521387 ZNF652Q9Y2D9 606 aa9.94□□□□□ -0.82
CTNNA1-227ENST00000521387 POTEB3A0JP26 581 aa9.93□□□□□ -0.82
CTNNA1-227ENST00000521387 NBPF26B4DH59 902 aa9.93□□□□□ -0.82
CTNNA1-227ENST00000521387 TNFRSF10AO00220 468 aa9.93□□□□□ -0.82
CTNNA1-227ENST00000521387 RGL2O15211 777 aa9.93□□□□□ -0.82
CTNNA1-227ENST00000521387 KCNQ3O43525 872 aa9.93□□□□□ -0.82
CTNNA1-227ENST00000521387 RPS12P25398 132 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-227ENST00000521387 NBPF10Q6P3W6 841 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-227ENST00000521387 ZNF790Q6PG37 636 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms