RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 LRRC37AA6NMS7 1700 aa13.25□□□□□ -0.29
TRAPPC9-209ENST00000521167 DDNO94850 711 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC9-209ENST00000521167 ATN1P54259 1190 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC9-209ENST00000521167 FSTL1Q12841 308 aa13.25□□□□□ -0.29
TRAPPC9-209ENST00000521167 GCKRQ14397 625 aa13.25□□□□□ -0.29
TRAPPC9-209ENST00000521167 GSE1Q14687 1217 aa13.25□□□□□ -0.29
TRAPPC9-209ENST00000521167 CWF19L2Q2TBE0 894 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-209ENST00000521167 TRMT2AQ8IZ69 625 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-209ENST00000521167 LARGE2Q8N3Y3 721 aa13.25□□□□□ -0.29
TRAPPC9-209ENST00000521167 JARID2Q92833 1246 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC9-209ENST00000521167 CELF1Q92879 486 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-209ENST00000521167 L3MBTL3Q96JM7 780 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC9-209ENST00000521167 HSPA6P17066 643 aa13.24□□□□□ -0.29
TRAPPC9-209ENST00000521167 EIF6P56537 245 aaKnown RBP13.24□□□□□ -0.29
TRAPPC9-209ENST00000521167 IFNL1Q8IU54 200 aa13.24□□□□□ -0.29
TRAPPC9-209ENST00000521167 PLA2G12BQ9BX93 195 aa13.24□□□□□ -0.29
TRAPPC9-209ENST00000521167 IQCA1LA6NCM1 817 aa13.23□□□□□ -0.29
TRAPPC9-209ENST00000521167 PPIP5K2O43314 1243 aa13.23□□□□□ -0.29
TRAPPC9-209ENST00000521167 C7P10643 843 aa13.23□□□□□ -0.29
TRAPPC9-209ENST00000521167 CTSWP56202 376 aa13.23□□□□□ -0.29
TRAPPC9-209ENST00000521167 NIM1KQ8IY84 436 aa13.23□□□□□ -0.29
TRAPPC9-209ENST00000521167 GPC2Q8N158 579 aa13.23□□□□□ -0.29
TRAPPC9-209ENST00000521167 SMC1BQ8NDV3 1235 aa13.23□□□□□ -0.29
TRAPPC9-209ENST00000521167 TTLL11Q8NHH1 800 aa13.23□□□□□ -0.29
TRAPPC9-209ENST00000521167 SLC39A7Q92504 469 aa13.23□□□□□ -0.29
TRAPPC9-209ENST00000521167 SPOCK2Q92563 424 aa13.23□□□□□ -0.29
TRAPPC9-209ENST00000521167 SEC31BQ9NQW1 1179 aa13.23□□□□□ -0.29
TRAPPC9-209ENST00000521167 ZNF541Q9H0D2 1346 aa13.22□□□□□ -0.29
TRAPPC9-209ENST00000521167 CT47B1P0C2W7 299 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC9-209ENST00000521167 KIAA2012Q0VF49 1180 aa13.22□□□□□ -0.29
TRAPPC9-209ENST00000521167 BEND3Q5T5X7 828 aa13.22□□□□□ -0.29
TRAPPC9-209ENST00000521167 UBE3BQ7Z3V4 1068 aa13.22□□□□□ -0.29
TRAPPC9-209ENST00000521167 SLC51AQ86UW1 340 aa13.22□□□□□ -0.29
TRAPPC9-209ENST00000521167 MRPL50Q8N5N7 158 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-209ENST00000521167 CDCA7LQ96GN5 454 aa13.22□□□□□ -0.29
TRAPPC9-209ENST00000521167 RTL9Q8NET4 1388 aa13.21□□□□□ -0.29
TRAPPC9-209ENST00000521167 TTLL13PA6NNM8 815 aa13.21□□□□□ -0.29
TRAPPC9-209ENST00000521167 F6X3S4 739 aa13.21□□□□□ -0.29
TRAPPC9-209ENST00000521167 ALDH1L1O75891 902 aa13.21□□□□□ -0.29
TRAPPC9-209ENST00000521167 CASP7P55210 303 aa13.21□□□□□ -0.29
TRAPPC9-209ENST00000521167 AOC3Q16853 763 aa13.21□□□□□ -0.29
TRAPPC9-209ENST00000521167 ALDH1L2Q3SY69 923 aa13.21□□□□□ -0.29
TRAPPC9-209ENST00000521167 ANKRD18AQ8IVF6 992 aa13.21□□□□□ -0.29
TRAPPC9-209ENST00000521167 CDC5LQ99459 802 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-209ENST00000521167 PODXL2Q9NZ53 605 aa13.21□□□□□ -0.29
TRAPPC9-209ENST00000521167 ZNRF3Q9ULT6 936 aa13.21□□□□□ -0.29
TRAPPC9-209ENST00000521167 NSFL1CQ9UNZ2 370 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-209ENST00000521167 COL4A5P29400 1685 aa13.21□□□□□ -0.3
TRAPPC9-209ENST00000521167 CSF1RP07333 972 aa13.2□□□□□ -0.3
TRAPPC9-209ENST00000521167 PYGBP11216 843 aa13.2□□□□□ -0.3
TRAPPC9-209ENST00000521167 APLP1P51693 650 aa13.2□□□□□ -0.3
TRAPPC9-209ENST00000521167 GPSM2P81274 684 aa13.2□□□□□ -0.3
TRAPPC9-209ENST00000521167 WASHC4Q2M389 1173 aa13.2□□□□□ -0.3
TRAPPC9-209ENST00000521167 EYA3Q99504 573 aa13.2□□□□□ -0.3
TRAPPC9-209ENST00000521167 HACL1Q9UJ83 578 aa13.2□□□□□ -0.3
TRAPPC9-209ENST00000521167 METRNQ9UJH8 293 aa13.2□□□□□ -0.3
TRAPPC9-209ENST00000521167 COL4A1P02462 1669 aa13.2□□□□□ -0.3
TRAPPC9-209ENST00000521167 LTBP1Q14766 1721 aa13.19□□□□□ -0.3
TRAPPC9-209ENST00000521167 PTPRCP08575 1304 aa13.19□□□□□ -0.3
TRAPPC9-209ENST00000521167 C6orf229H3BNL8 230 aa13.19□□□□□ -0.3
TRAPPC9-209ENST00000521167 CHRM1P11229 460 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-209ENST00000521167 TBC1D16Q8TBP0 767 aa13.19□□□□□ -0.3
TRAPPC9-209ENST00000521167 SSH1Q8WYL5 1049 aa13.19□□□□□ -0.3
TRAPPC9-209ENST00000521167 CCDC85AQ96PX6 553 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-209ENST00000521167 SRCIN1Q9C0H9 1055 aa13.19□□□□□ -0.3
TRAPPC9-209ENST00000521167 TAF1DQ9H5J8 278 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-209ENST00000521167 BSDC1Q9NW68 430 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-209ENST00000521167 POLLQ9UGP5 575 aa13.19□□□□□ -0.3
TRAPPC9-209ENST00000521167 DUOX1Q9NRD9 1551 aa13.19□□□□□ -0.3
TRAPPC9-209ENST00000521167 SPEF2Q9C093 1822 aa13.18□□□□□ -0.3
TRAPPC9-209ENST00000521167 POTEB2H3BUK9 544 aa13.18□□□□□ -0.3
TRAPPC9-209ENST00000521167 TNIP1Q15025 636 aa13.18□□□□□ -0.3
TRAPPC9-209ENST00000521167 PNMA8AQ86V59 439 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC9-209ENST00000521167 GREM2Q9H772 168 aa13.18□□□□□ -0.3
TRAPPC9-209ENST00000521167 ANKIB1Q9P2G1 1089 aa13.18□□□□□ -0.3
TRAPPC9-209ENST00000521167 GJA3Q9Y6H8 435 aa13.18□□□□□ -0.3
TRAPPC9-209ENST00000521167 GRM8O00222 908 aa13.17□□□□□ -0.3
TRAPPC9-209ENST00000521167 LMOD1P29536 600 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC9-209ENST00000521167 EPHX2P34913 555 aa13.17□□□□□ -0.3
TRAPPC9-209ENST00000521167 IGHMBP2P38935 993 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-209ENST00000521167 CXCL9Q07325 125 aa13.17□□□□□ -0.3
TRAPPC9-209ENST00000521167 CIAPIN1Q6FI81 312 aa13.17□□□□□ -0.3
TRAPPC9-209ENST00000521167 SLC4A10Q6U841 1118 aa13.17□□□□□ -0.3
TRAPPC9-209ENST00000521167 ZC3H12CQ9C0D7 883 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-209ENST00000521167 C9orf78Q9NZ63 289 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC9-209ENST00000521167 GGA1Q9UJY5 639 aa13.17□□□□□ -0.3
TRAPPC9-209ENST00000521167 XDHP47989 1333 aa13.16□□□□□ -0.3
TRAPPC9-209ENST00000521167 ITGA6P23229 1130 aa13.16□□□□□ -0.3
TRAPPC9-209ENST00000521167 ATP2B4P23634 1241 aa13.16□□□□□ -0.3
TRAPPC9-209ENST00000521167 BRPF1P55201 1214 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC9-209ENST00000521167 FOXO4P98177 505 aa13.16□□□□□ -0.3
TRAPPC9-209ENST00000521167 LDHDQ86WU2 507 aa13.16□□□□□ -0.3
TRAPPC9-209ENST00000521167 ANKRD18BA2A2Z9 1011 aa13.15□□□□□ -0.3
TRAPPC9-209ENST00000521167 RIMBP2O15034 1052 aa13.15□□□□□ -0.3
TRAPPC9-209ENST00000521167 UFL1O94874 794 aa13.15□□□□□ -0.3
TRAPPC9-209ENST00000521167 MPHOSPH8Q99549 860 aa13.15□□□□□ -0.3
TRAPPC9-209ENST00000521167 SMC4Q9NTJ3 1288 aa13.15□□□□□ -0.3
TRAPPC9-209ENST00000521167 MINPP1Q9UNW1 487 aa13.15□□□□□ -0.3
TRAPPC9-209ENST00000521167 UTYO14607 1347 aa13.14□□□□□ -0.31
TRAPPC9-209ENST00000521167 PSME4Q14997 1843 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms