RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 DGKZQ13574 1117 aa24.25■■□□□ 1.47
SNHG6-204ENST00000521127 TBC1D16Q8TBP0 767 aa24.25■■□□□ 1.47
SNHG6-204ENST00000521127 RUNDC1Q96C34 613 aa24.25■■□□□ 1.47
SNHG6-204ENST00000521127 GBA2Q9HCG7 927 aaPredicted RBP24.25■■□□□ 1.47
SNHG6-204ENST00000521127 RGMBQ6NW40 437 aa24.24■■□□□ 1.47
SNHG6-204ENST00000521127 DUSP27Q5VZP5 1158 aa24.23■■□□□ 1.47
SNHG6-204ENST00000521127 DCPSQ96C86 337 aaKnown RBP24.23■■□□□ 1.47
SNHG6-204ENST00000521127 EYA3Q99504 573 aa24.23■■□□□ 1.47
SNHG6-204ENST00000521127 HYPKQ9NX55 129 aa24.23■■□□□ 1.47
SNHG6-204ENST00000521127 ASTN2O75129 1339 aaPredicted RBP24.22■■□□□ 1.47
SNHG6-204ENST00000521127 VIL1P09327 827 aaKnown RBP24.22■■□□□ 1.47
SNHG6-204ENST00000521127 C2orf69Q8N8R5 385 aa24.22■■□□□ 1.47
SNHG6-204ENST00000521127 CFAP44Q96MT7 982 aa24.22■■□□□ 1.47
SNHG6-204ENST00000521127 SEC31BQ9NQW1 1179 aa24.22■■□□□ 1.47
SNHG6-204ENST00000521127 KIF23Q02241 960 aaPredicted RBP24.21■■□□□ 1.47
SNHG6-204ENST00000521127 KIF4BQ2VIQ3 1234 aa24.21■■□□□ 1.47
SNHG6-204ENST00000521127 MYBBP1AQ9BQG0 1328 aaKnown RBP24.2■■□□□ 1.46
SNHG6-204ENST00000521127 ZC3H12CQ9C0D7 883 aaKnown RBP24.2■■□□□ 1.46
SNHG6-204ENST00000521127 PODXL2Q9NZ53 605 aa24.2■■□□□ 1.46
SNHG6-204ENST00000521127 ZBTB38Q8NAP3 1195 aaPredicted RBP24.19■■□□□ 1.46
SNHG6-204ENST00000521127 CCDC102AQ96A19 550 aa24.19■■□□□ 1.46
SNHG6-204ENST00000521127 MBIPQ9NS73 344 aa24.19■■□□□ 1.46
SNHG6-204ENST00000521127 GGA3Q9NZ52 723 aa24.19■■□□□ 1.46
SNHG6-204ENST00000521127 ADAMTS8Q9UP79 889 aa24.19■■□□□ 1.46
SNHG6-204ENST00000521127 ZNF157P51786 506 aaPredicted RBP24.18■■□□□ 1.46
SNHG6-204ENST00000521127 PHAXQ9H814 394 aaKnown RBP24.18■■□□□ 1.46
SNHG6-204ENST00000521127 UFL1O94874 794 aa24.17■■□□□ 1.46
SNHG6-204ENST00000521127 RIC3Q7Z5B4 369 aa24.17■■□□□ 1.46
SNHG6-204ENST00000521127 PDE4DIPQ5VU43 2346 aa24.16■■□□□ 1.46
SNHG6-204ENST00000521127 ZNF853P0CG23 659 aa24.16■■□□□ 1.46
SNHG6-204ENST00000521127 WDR43Q15061 677 aaKnown RBP eCLIP24.16■■□□□ 1.46
SNHG6-204ENST00000521127 SULF1Q8IWU6 871 aa24.16■■□□□ 1.46
SNHG6-204ENST00000521127 JARID2Q92833 1246 aaPredicted RBP24.16■■□□□ 1.46
SNHG6-204ENST00000521127 RNF186Q9NXI6 227 aa24.16■■□□□ 1.46
SNHG6-204ENST00000521127 SAGE1Q9NXZ1 904 aa24.16■■□□□ 1.46
SNHG6-204ENST00000521127 SLC10A3P09131 477 aa24.15■■□□□ 1.46
SNHG6-204ENST00000521127 ZNF280AP59817 542 aaPredicted RBP24.15■■□□□ 1.46
SNHG6-204ENST00000521127 CDCA5Q96FF9 252 aa24.15■■□□□ 1.46
SNHG6-204ENST00000521127 ANKIB1Q9P2G1 1089 aa24.15■■□□□ 1.46
SNHG6-204ENST00000521127 GGA1Q9UJY5 639 aa24.15■■□□□ 1.46
SNHG6-204ENST00000521127 TRPA1O75762 1119 aa24.14■■□□□ 1.45
SNHG6-204ENST00000521127 GOLGA2Q08379 1002 aa24.14■■□□□ 1.45
SNHG6-204ENST00000521127 DDX10Q13206 875 aaKnown RBP24.14■■□□□ 1.45
SNHG6-204ENST00000521127 RSBN1LQ6PCB5 846 aaPredicted RBP24.14■■□□□ 1.45
SNHG6-204ENST00000521127 CSRNP1Q96S65 589 aa24.14■■□□□ 1.45
SNHG6-204ENST00000521127 MYD88Q99836 296 aa24.14■■□□□ 1.45
SNHG6-204ENST00000521127 AKAP11Q9UKA4 1901 aa24.14■■□□□ 1.45
SNHG6-204ENST00000521127 G3V3G9 751 aa24.13■■□□□ 1.45
SNHG6-204ENST00000521127 PCCAP05165 728 aaPredicted RBP24.13■■□□□ 1.45
SNHG6-204ENST00000521127 SCARF1Q14162 830 aa24.13■■□□□ 1.45
SNHG6-204ENST00000521127 DCAF8Q5TAQ9 597 aa24.13■■□□□ 1.45
SNHG6-204ENST00000521127 ANGEL2Q5VTE6 544 aaKnown RBP24.13■■□□□ 1.45
SNHG6-204ENST00000521127 CCDC85AQ96PX6 553 aaPredicted RBP24.13■■□□□ 1.45
SNHG6-204ENST00000521127 GMLQ99445 158 aa24.13■■□□□ 1.45
SNHG6-204ENST00000521127 TNRC18O15417 2968 aaPredicted RBP24.12■■□□□ 1.45
SNHG6-204ENST00000521127 ZNF609O15014 1411 aa24.12■■□□□ 1.45
SNHG6-204ENST00000521127 ELL2O00472 640 aaPredicted RBP24.12■■□□□ 1.45
SNHG6-204ENST00000521127 CCDC152Q4G0S7 254 aa24.12■■□□□ 1.45
SNHG6-204ENST00000521127 CCDC191Q8NCU4 936 aa24.12■■□□□ 1.45
SNHG6-204ENST00000521127 AGBL3Q8NEM8 1001 aa24.12■■□□□ 1.45
SNHG6-204ENST00000521127 PSME4Q14997 1843 aa24.12■■□□□ 1.45
SNHG6-204ENST00000521127 PDE8AO60658 829 aa24.11■■□□□ 1.45
SNHG6-204ENST00000521127 HSP90B1P14625 803 aaKnown RBP24.1■■□□□ 1.45
SNHG6-204ENST00000521127 RASAL3Q86YV0 1011 aa24.1■■□□□ 1.45
SNHG6-204ENST00000521127 WTIPA6NIX2 430 aaPredicted RBP24.09■■□□□ 1.45
SNHG6-204ENST00000521127 CWC25Q9NXE8 425 aaPredicted RBP24.09■■□□□ 1.45
SNHG6-204ENST00000521127 XDHP47989 1333 aa24.09■■□□□ 1.45
SNHG6-204ENST00000521127 C8orf58Q8NAV2 365 aa24.08■■□□□ 1.45
SNHG6-204ENST00000521127 METTL22Q9BUU2 404 aaPredicted RBP24.08■■□□□ 1.45
SNHG6-204ENST00000521127 MYOZ2Q9NPC6 264 aa24.08■■□□□ 1.45
SNHG6-204ENST00000521127 IFT57Q9NWB7 429 aa24.08■■□□□ 1.45
SNHG6-204ENST00000521127 USP17L8P0C7I0 530 aa24.07■■□□□ 1.44
SNHG6-204ENST00000521127 MOB2Q70IA6 237 aa24.07■■□□□ 1.44
SNHG6-204ENST00000521127 ANKRD18AQ8IVF6 992 aa24.07■■□□□ 1.44
SNHG6-204ENST00000521127 SCAF8Q9UPN6 1271 aaKnown RBP24.07■■□□□ 1.44
SNHG6-204ENST00000521127 USP17L3A6NCW0 530 aa24.06■■□□□ 1.44
SNHG6-204ENST00000521127 USP17L4A6NCW7 530 aa24.06■■□□□ 1.44
SNHG6-204ENST00000521127 APAF1O14727 1248 aa24.06■■□□□ 1.44
SNHG6-204ENST00000521127 ATP2B4P23634 1241 aa24.06■■□□□ 1.44
SNHG6-204ENST00000521127 ZEB1P37275 1124 aaPredicted RBP24.06■■□□□ 1.44
SNHG6-204ENST00000521127 SOX10P56693 466 aa24.06■■□□□ 1.44
SNHG6-204ENST00000521127 USP17L1Q7RTZ2 530 aa24.06■■□□□ 1.44
SNHG6-204ENST00000521127 GNAI1P63096 354 aa24.05■■□□□ 1.44
SNHG6-204ENST00000521127 FKBP1BP68106 108 aa24.05■■□□□ 1.44
SNHG6-204ENST00000521127 PODNQ7Z5L7 613 aa24.05■■□□□ 1.44
SNHG6-204ENST00000521127 PITPNM2Q9BZ72 1349 aa24.05■■□□□ 1.44
SNHG6-204ENST00000521127 PAPPA2Q9BXP8 1791 aa24.04■■□□□ 1.44
SNHG6-204ENST00000521127 PRAMEF18Q5VWM3 479 aa24.03■■□□□ 1.44
SNHG6-204ENST00000521127 CTU1Q7Z7A3 348 aaKnown RBP24.03■■□□□ 1.44
SNHG6-204ENST00000521127 REM2Q8IYK8 340 aaPredicted RBP24.03■■□□□ 1.44
SNHG6-204ENST00000521127 MXD3Q9BW11 206 aa24.03■■□□□ 1.44
SNHG6-204ENST00000521127 MAP3K2Q9Y2U5 619 aa24.03■■□□□ 1.44
SNHG6-204ENST00000521127 UBE2Q2LH0YL09 131 aa24.02■■□□□ 1.44
SNHG6-204ENST00000521127 IGKV5-2P06315 115 aa24.02■■□□□ 1.44
SNHG6-204ENST00000521127 CTSWP56202 376 aa24.02■■□□□ 1.44
SNHG6-204ENST00000521127 NBPF9Q3BBW0 867 aa24.02■■□□□ 1.44
SNHG6-204ENST00000521127 TTLL11Q8NHH1 800 aa24.02■■□□□ 1.44
SNHG6-204ENST00000521127 MINPP1Q9UNW1 487 aa24.02■■□□□ 1.44
SNHG6-204ENST00000521127 DDX58O95786 925 aaKnown RBP24.01■■□□□ 1.43
SNHG6-204ENST00000521127 TSPYL6Q8N831 410 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms