RNA–Protein interactions for RNA: ENST00000521005.1

VPS37A-208, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3 BASIC

Gene VPS37A, Length 479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-208ENST00000521005 NECTIN2Q92692 538 aa9.67□□□□□ -0.86
VPS37A-208ENST00000521005 TMX4Q9H1E5 349 aaPredicted RBP9.67□□□□□ -0.86
VPS37A-208ENST00000521005 SPEF2Q9C093 1822 aa9.66□□□□□ -0.86
VPS37A-208ENST00000521005 ZNF157P51786 506 aaPredicted RBP9.66□□□□□ -0.86
VPS37A-208ENST00000521005 AIMP1Q12904 312 aaKnown RBP9.66□□□□□ -0.86
VPS37A-208ENST00000521005 DOK7Q18PE1 504 aa9.66□□□□□ -0.86
VPS37A-208ENST00000521005 KRT24Q2M2I5 525 aa9.66□□□□□ -0.86
VPS37A-208ENST00000521005 WASHC4Q2M389 1173 aa9.66□□□□□ -0.86
VPS37A-208ENST00000521005 C2orf69Q8N8R5 385 aa9.66□□□□□ -0.86
VPS37A-208ENST00000521005 TRMT112Q9UI30 125 aaKnown RBP9.66□□□□□ -0.86
VPS37A-208ENST00000521005 TSPYL4Q9UJ04 414 aa9.66□□□□□ -0.86
VPS37A-208ENST00000521005 PAPPA2Q9BXP8 1791 aa9.65□□□□□ -0.86
VPS37A-208ENST00000521005 SH3TC1Q8TE82 1336 aa9.65□□□□□ -0.86
VPS37A-208ENST00000521005 ECE2O60344 883 aa9.65□□□□□ -0.86
VPS37A-208ENST00000521005 RASAL3Q86YV0 1011 aa9.65□□□□□ -0.86
VPS37A-208ENST00000521005 CCDC102AQ96A19 550 aa9.65□□□□□ -0.86
VPS37A-208ENST00000521005 NSFL1CQ9UNZ2 370 aaKnown RBP9.65□□□□□ -0.86
VPS37A-208ENST00000521005 VIL1P09327 827 aaKnown RBP9.64□□□□□ -0.87
VPS37A-208ENST00000521005 SF3B3Q15393 1217 aaKnown RBP9.64□□□□□ -0.87
VPS37A-208ENST00000521005 KIF4BQ2VIQ3 1234 aa9.64□□□□□ -0.87
VPS37A-208ENST00000521005 HSP90AB3PQ58FF7 597 aa9.64□□□□□ -0.87
VPS37A-208ENST00000521005 MOB2Q70IA6 237 aa9.64□□□□□ -0.87
VPS37A-208ENST00000521005 CTU1Q7Z7A3 348 aaKnown RBP9.64□□□□□ -0.87
VPS37A-208ENST00000521005 TBC1D16Q8TBP0 767 aa9.64□□□□□ -0.87
VPS37A-208ENST00000521005 DCPSQ96C86 337 aaKnown RBP9.64□□□□□ -0.87
VPS37A-208ENST00000521005 CDCA5Q96FF9 252 aa9.64□□□□□ -0.87
VPS37A-208ENST00000521005 FAM89AQ96GI7 184 aa9.64□□□□□ -0.87
VPS37A-208ENST00000521005 ISCA1Q9BUE6 129 aa9.64□□□□□ -0.87
VPS37A-208ENST00000521005 GGA3Q9NZ52 723 aa9.64□□□□□ -0.87
VPS37A-208ENST00000521005 SCAF8Q9UPN6 1271 aaKnown RBP9.64□□□□□ -0.87
VPS37A-208ENST00000521005 HPS5Q9UPZ3 1129 aa9.64□□□□□ -0.87
VPS37A-208ENST00000521005 LAMB1P07942 1786 aa9.64□□□□□ -0.87
VPS37A-208ENST00000521005 C6orf229H3BNL8 230 aa9.63□□□□□ -0.87
VPS37A-208ENST00000521005 RPS12P25398 132 aaKnown RBP9.63□□□□□ -0.87
VPS37A-208ENST00000521005 PRPF38BQ5VTL8 546 aaKnown RBP9.63□□□□□ -0.87
VPS37A-208ENST00000521005 TMC4Q7Z404 712 aa9.63□□□□□ -0.87
VPS37A-208ENST00000521005 ZNF609O15014 1411 aa9.63□□□□□ -0.87
VPS37A-208ENST00000521005 PDE4DIPQ5VU43 2346 aa9.62□□□□□ -0.87
VPS37A-208ENST00000521005 ATP5J2-PTCD1G3V325 749 aa9.62□□□□□ -0.87
VPS37A-208ENST00000521005 RIPK4P57078 832 aa9.62□□□□□ -0.87
VPS37A-208ENST00000521005 RTL5Q5HYW3 569 aaPredicted RBP9.62□□□□□ -0.87
VPS37A-208ENST00000521005 ANGEL2Q5VTE6 544 aaKnown RBP9.62□□□□□ -0.87
VPS37A-208ENST00000521005 SEC31BQ9NQW1 1179 aa9.62□□□□□ -0.87
VPS37A-208ENST00000521005 CHPF2Q9P2E5 772 aa9.62□□□□□ -0.87
VPS37A-208ENST00000521005 RBBP6Q7Z6E9 1792 aaKnown RBP9.61□□□□□ -0.87
VPS37A-208ENST00000521005 MYH3P11055 1940 aa9.61□□□□□ -0.87
VPS37A-208ENST00000521005 WTIPA6NIX2 430 aaPredicted RBP9.61□□□□□ -0.87
VPS37A-208ENST00000521005 TBC1D8O95759 1140 aa9.61□□□□□ -0.87
VPS37A-208ENST00000521005 NEFMP07197 916 aa9.61□□□□□ -0.87
VPS37A-208ENST00000521005 ZNF280AP59817 542 aaPredicted RBP9.61□□□□□ -0.87
VPS37A-208ENST00000521005 SCARF1Q14162 830 aa9.61□□□□□ -0.87
VPS37A-208ENST00000521005 PRAMEF18Q5VWM3 479 aa9.61□□□□□ -0.87
VPS37A-208ENST00000521005 SULF1Q8IWU6 871 aa9.61□□□□□ -0.87
VPS37A-208ENST00000521005 PLBD2Q8NHP8 589 aa9.61□□□□□ -0.87
VPS37A-208ENST00000521005 ZNF296Q8WUU4 475 aaPredicted RBP9.61□□□□□ -0.87
VPS37A-208ENST00000521005 GMLQ99445 158 aa9.61□□□□□ -0.87
VPS37A-208ENST00000521005 R3HDMLQ9H3Y0 253 aa9.61□□□□□ -0.87
VPS37A-208ENST00000521005 BABAM1Q9NWV8 329 aa9.61□□□□□ -0.87
VPS37A-208ENST00000521005 PODXL2Q9NZ53 605 aa9.61□□□□□ -0.87
VPS37A-208ENST00000521005 CHL1O00533 1208 aa9.6□□□□□ -0.87
VPS37A-208ENST00000521005 TMPOP42166 694 aaKnown RBP9.6□□□□□ -0.87
VPS37A-208ENST00000521005 RPS8P62241 208 aaKnown RBP9.6□□□□□ -0.87
VPS37A-208ENST00000521005 RSBN1LQ6PCB5 846 aaPredicted RBP9.6□□□□□ -0.87
VPS37A-208ENST00000521005 ANKRD13DQ6ZTN6 518 aa9.6□□□□□ -0.87
VPS37A-208ENST00000521005 EYA3Q99504 573 aa9.6□□□□□ -0.87
VPS37A-208ENST00000521005 MAPK8IP3Q9UPT6 1336 aa9.59□□□□□ -0.87
VPS37A-208ENST00000521005 ECM29Q5VYK3 1845 aa9.59□□□□□ -0.87
VPS37A-208ENST00000521005 SPDYE2BA6NHP3 402 aa9.59□□□□□ -0.87
VPS37A-208ENST00000521005 UBE2Q2LH0YL09 131 aa9.59□□□□□ -0.87
VPS37A-208ENST00000521005 IRS4O14654 1257 aaPredicted RBP9.59□□□□□ -0.87
VPS37A-208ENST00000521005 SPDYE6P0CI01 402 aa9.59□□□□□ -0.87
VPS37A-208ENST00000521005 TM4SF4P48230 202 aa9.59□□□□□ -0.87
VPS37A-208ENST00000521005 SPDYE2Q495Y8 402 aa9.59□□□□□ -0.87
VPS37A-208ENST00000521005 ZC3H12CQ9C0D7 883 aaKnown RBP9.59□□□□□ -0.87
VPS37A-208ENST00000521005 TRIM35Q9UPQ4 493 aa9.59□□□□□ -0.87
VPS37A-208ENST00000521005 GPR25O00155 361 aa9.58□□□□□ -0.88
VPS37A-208ENST00000521005 TRIM28Q13263 835 aaKnown RBP9.58□□□□□ -0.88
VPS37A-208ENST00000521005 NBPF9Q3BBW0 867 aa9.58□□□□□ -0.88
VPS37A-208ENST00000521005 REM2Q8IYK8 340 aaPredicted RBP9.58□□□□□ -0.88
VPS37A-208ENST00000521005 AGBL3Q8NEM8 1001 aa9.58□□□□□ -0.88
VPS37A-208ENST00000521005 JARID2Q92833 1246 aaPredicted RBP9.58□□□□□ -0.88
VPS37A-208ENST00000521005 MXD3Q9BW11 206 aa9.58□□□□□ -0.88
VPS37A-208ENST00000521005 MYOZ2Q9NPC6 264 aa9.58□□□□□ -0.88
VPS37A-208ENST00000521005 A0A1B0GUL6 1792 aa9.58□□□□□ -0.88
VPS37A-208ENST00000521005 PITPNM2Q9BZ72 1349 aa9.57□□□□□ -0.88
VPS37A-208ENST00000521005 SPDYE4A6NLX3 237 aa9.57□□□□□ -0.88
VPS37A-208ENST00000521005 UFL1O94874 794 aa9.57□□□□□ -0.88
VPS37A-208ENST00000521005 FKBP1BP68106 108 aa9.57□□□□□ -0.88
VPS37A-208ENST00000521005 MKRN3Q13064 507 aaKnown RBP9.57□□□□□ -0.88
VPS37A-208ENST00000521005 PKN2Q16513 984 aaKnown RBP9.57□□□□□ -0.88
VPS37A-208ENST00000521005 USP17L8P0C7I0 530 aa9.56□□□□□ -0.88
VPS37A-208ENST00000521005 NOM1Q5C9Z4 860 aaKnown RBP9.56□□□□□ -0.88
VPS37A-208ENST00000521005 HDGFL1Q5TGJ6 251 aa9.56□□□□□ -0.88
VPS37A-208ENST00000521005 FBXO46Q6PJ61 603 aaPredicted RBP9.56□□□□□ -0.88
VPS37A-208ENST00000521005 ZBTB38Q8NAP3 1195 aaPredicted RBP9.56□□□□□ -0.88
VPS37A-208ENST00000521005 CCDC85AQ96PX6 553 aaPredicted RBP9.56□□□□□ -0.88
VPS37A-208ENST00000521005 PNNQ9H307 717 aaKnown RBP9.56□□□□□ -0.88
VPS37A-208ENST00000521005 PHAXQ9H814 394 aaKnown RBP9.56□□□□□ -0.88
VPS37A-208ENST00000521005 GGA1Q9UJY5 639 aa9.56□□□□□ -0.88
VPS37A-208ENST00000521005 HDAC9Q9UKV0 1011 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms