RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 ANKRD18BA2A2Z9 1011 aa10.51□□□□□ -0.73
VAPB-206ENST00000520497 EYA2O00167 538 aa10.51□□□□□ -0.73
VAPB-206ENST00000520497 SERPINB2P05120 415 aa10.51□□□□□ -0.73
VAPB-206ENST00000520497 GTF2E1P29083 439 aaPredicted RBP10.51□□□□□ -0.73
VAPB-206ENST00000520497 IL15P40933 162 aaPredicted RBP10.51□□□□□ -0.73
VAPB-206ENST00000520497 OS9Q13438 667 aaPredicted RBP10.51□□□□□ -0.73
VAPB-206ENST00000520497 C16orf71Q8IYS4 520 aaPredicted RBP10.51□□□□□ -0.73
VAPB-206ENST00000520497 ZNF784Q8NCA9 323 aaPredicted RBP10.51□□□□□ -0.73
VAPB-206ENST00000520497 SP7Q8TDD2 431 aaPredicted RBP10.51□□□□□ -0.73
VAPB-206ENST00000520497 OTUD7AQ8TE49 926 aaPredicted RBP10.51□□□□□ -0.73
VAPB-206ENST00000520497 CCDC85AQ96PX6 553 aaPredicted RBP10.51□□□□□ -0.73
VAPB-206ENST00000520497 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.51□□□□□ -0.73
VAPB-206ENST00000520497 ZNF609O15014 1411 aa10.5□□□□□ -0.73
VAPB-206ENST00000520497 YBX3P16989 372 aaKnown RBP eCLIP10.5□□□□□ -0.73
VAPB-206ENST00000520497 LRRC24Q50LG9 513 aa10.5□□□□□ -0.73
VAPB-206ENST00000520497 NLRP3Q96P20 1036 aa10.5□□□□□ -0.73
VAPB-206ENST00000520497 PUS3Q9BZE2 481 aaKnown RBP10.5□□□□□ -0.73
VAPB-206ENST00000520497 OSBPL3Q9H4L5 887 aa10.5□□□□□ -0.73
VAPB-206ENST00000520497 IL1RAPL2Q9NP60 686 aa10.5□□□□□ -0.73
VAPB-206ENST00000520497 SEC31BQ9NQW1 1179 aa10.5□□□□□ -0.73
VAPB-206ENST00000520497 TSHZ2Q9NRE2 1034 aa10.5□□□□□ -0.73
VAPB-206ENST00000520497 DOCK2Q92608 1830 aa10.49□□□□□ -0.73
VAPB-206ENST00000520497 MMP10P09238 476 aa10.49□□□□□ -0.73
VAPB-206ENST00000520497 ST5P78524 1137 aa10.49□□□□□ -0.73
VAPB-206ENST00000520497 TFCP2Q12800 502 aa10.49□□□□□ -0.73
VAPB-206ENST00000520497 GPR162Q16538 588 aa10.49□□□□□ -0.73
VAPB-206ENST00000520497 CRY2Q49AN0 593 aa10.49□□□□□ -0.73
VAPB-206ENST00000520497 CLASRPQ8N2M8 674 aaKnown RBP10.49□□□□□ -0.73
VAPB-206ENST00000520497 GPR108Q9NPR9 543 aa10.49□□□□□ -0.73
VAPB-206ENST00000520497 STAP2Q9UGK3 403 aa10.49□□□□□ -0.73
VAPB-206ENST00000520497 RIPOR2Q9Y4F9 1068 aa10.49□□□□□ -0.73
VAPB-206ENST00000520497 AOX1Q06278 1338 aa10.49□□□□□ -0.73
VAPB-206ENST00000520497 SLX4Q8IY92 1834 aa10.49□□□□□ -0.73
VAPB-206ENST00000520497 KLRG2A4D1S0 409 aaPredicted RBP10.48□□□□□ -0.73
VAPB-206ENST00000520497 ATXN8OSP0DMR3 200 aa10.48□□□□□ -0.73
VAPB-206ENST00000520497 MX1P20591 662 aa10.48□□□□□ -0.73
VAPB-206ENST00000520497 PDE1AP54750 535 aa10.48□□□□□ -0.73
VAPB-206ENST00000520497 TAF7LQ5H9L4 462 aa10.48□□□□□ -0.73
VAPB-206ENST00000520497 LDHAL6AQ6ZMR3 332 aa10.48□□□□□ -0.73
VAPB-206ENST00000520497 CCDC24Q8N4L8 307 aa10.48□□□□□ -0.73
VAPB-206ENST00000520497 VGLL2Q8N8G2 317 aa10.48□□□□□ -0.73
VAPB-206ENST00000520497 SLC16A10Q8TF71 515 aa10.48□□□□□ -0.73
VAPB-206ENST00000520497 EAF2Q96CJ1 260 aaPredicted RBP10.48□□□□□ -0.73
VAPB-206ENST00000520497 CDC5LQ99459 802 aaKnown RBP10.48□□□□□ -0.73
VAPB-206ENST00000520497 WWC3Q9ULE0 1092 aa10.48□□□□□ -0.73
VAPB-206ENST00000520497 NPHP1O15259 732 aa10.47□□□□□ -0.73
VAPB-206ENST00000520497 POLD1P28340 1107 aa10.47□□□□□ -0.73
VAPB-206ENST00000520497 TNNI3KQ59H18 835 aa10.47□□□□□ -0.73
VAPB-206ENST00000520497 BMP2KLQ5H9B9 411 aa10.47□□□□□ -0.73
VAPB-206ENST00000520497 TTC22Q5TAA0 569 aa10.47□□□□□ -0.73
VAPB-206ENST00000520497 PARP3Q9Y6F1 533 aa10.47□□□□□ -0.73
VAPB-206ENST00000520497 FPGT-TNNI3KV9GXZ4 949 aa10.47□□□□□ -0.73
VAPB-206ENST00000520497 TTC41PQ6P2S7 1318 aa10.47□□□□□ -0.73
VAPB-206ENST00000520497 EIF5BO60841 1220 aaKnown RBP10.46□□□□□ -0.73
VAPB-206ENST00000520497 GSPT1P15170 499 aaKnown RBP10.46□□□□□ -0.73
VAPB-206ENST00000520497 IGHMBP2P38935 993 aaKnown RBP10.46□□□□□ -0.73
VAPB-206ENST00000520497 AACSQ86V21 672 aa10.46□□□□□ -0.73
VAPB-206ENST00000520497 ANKRD18AQ8IVF6 992 aa10.46□□□□□ -0.73
VAPB-206ENST00000520497 PI4K2BQ8TCG2 481 aa10.46□□□□□ -0.73
VAPB-206ENST00000520497 CELF1Q92879 486 aaKnown RBP10.46□□□□□ -0.73
VAPB-206ENST00000520497 BRIP1Q9BX63 1249 aa10.46□□□□□ -0.73
VAPB-206ENST00000520497 CNNM1Q9NRU3 951 aa10.46□□□□□ -0.73
VAPB-206ENST00000520497 BSDC1Q9NW68 430 aaPredicted RBP10.46□□□□□ -0.73
VAPB-206ENST00000520497 CEP126Q9P2H0 1117 aa10.46□□□□□ -0.73
VAPB-206ENST00000520497 MROH5Q6ZUA9 1318 aa10.46□□□□□ -0.73
VAPB-206ENST00000520497 C10orf71Q711Q0 1435 aa10.46□□□□□ -0.74
VAPB-206ENST00000520497 CCDC88AQ3V6T2 1871 aa10.46□□□□□ -0.74
VAPB-206ENST00000520497 CHD4Q14839 1912 aa10.46□□□□□ -0.74
VAPB-206ENST00000520497 IFIT2P09913 472 aaKnown RBP10.45□□□□□ -0.74
VAPB-206ENST00000520497 HOXA10P31260 410 aaPredicted RBP10.45□□□□□ -0.74
VAPB-206ENST00000520497 C8orf34Q49A92 452 aa10.45□□□□□ -0.74
VAPB-206ENST00000520497 DDX46Q7L014 1031 aaKnown RBP10.45□□□□□ -0.74
VAPB-206ENST00000520497 MPHOSPH8Q99549 860 aa10.45□□□□□ -0.74
VAPB-206ENST00000520497 CCDC8Q9H0W5 538 aaPredicted RBP10.45□□□□□ -0.74
VAPB-206ENST00000520497 TLR7Q9NYK1 1049 aaKnown RBP10.45□□□□□ -0.74
VAPB-206ENST00000520497 DBNLQ9UJU6 430 aaKnown RBP10.45□□□□□ -0.74
VAPB-206ENST00000520497 ZBTB12Q9Y330 459 aaPredicted RBP10.45□□□□□ -0.74
VAPB-206ENST00000520497 PDE8BO95263 885 aa10.44□□□□□ -0.74
VAPB-206ENST00000520497 FGFR2P21802 821 aa10.44□□□□□ -0.74
VAPB-206ENST00000520497 RPS8P62241 208 aaKnown RBP10.44□□□□□ -0.74
VAPB-206ENST00000520497 GRAPQ13588 217 aa10.44□□□□□ -0.74
VAPB-206ENST00000520497 METTL24Q5JXM2 366 aa10.44□□□□□ -0.74
VAPB-206ENST00000520497 TSHZ3Q63HK5 1081 aa10.44□□□□□ -0.74
VAPB-206ENST00000520497 GRAPLQ8TC17 118 aaPredicted RBP10.44□□□□□ -0.74
VAPB-206ENST00000520497 CRAMP1Q96RY5 1269 aa10.44□□□□□ -0.74
VAPB-206ENST00000520497 BCL11AQ9H165 835 aa10.44□□□□□ -0.74
VAPB-206ENST00000520497 AKAP2Q9Y2D5 859 aa10.44□□□□□ -0.74
VAPB-206ENST00000520497 ARFGEF1Q9Y6D6 1849 aa10.44□□□□□ -0.74
VAPB-206ENST00000520497 UTRNP46939 3433 aa10.43□□□□□ -0.74
VAPB-206ENST00000520497 PSME4Q14997 1843 aa10.43□□□□□ -0.74
VAPB-206ENST00000520497 A0A1B0GUL7 405 aa10.43□□□□□ -0.74
VAPB-206ENST00000520497 PDE6BP35913 854 aa10.43□□□□□ -0.74
VAPB-206ENST00000520497 CHRNDQ07001 517 aa10.43□□□□□ -0.74
VAPB-206ENST00000520497 ATP2B3Q16720 1220 aa10.43□□□□□ -0.74
VAPB-206ENST00000520497 GPATCH3Q96I76 525 aa10.43□□□□□ -0.74
VAPB-206ENST00000520497 DBNDD2Q9BQY9 259 aa10.43□□□□□ -0.74
VAPB-206ENST00000520497 BACH2Q9BYV9 841 aa10.43□□□□□ -0.74
VAPB-206ENST00000520497 ECHDC1Q9NTX5 307 aa10.43□□□□□ -0.74
VAPB-206ENST00000520497 MINPP1Q9UNW1 487 aa10.43□□□□□ -0.74
VAPB-206ENST00000520497 DUOX1Q9NRD9 1551 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms