RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 ANAPC4Q9UJX5 808 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 SDSP20132 328 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 DDX46Q7L014 1031 aaKnown RBP13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 ARHGEF12Q9NZN5 1544 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 TRAPPC8Q9Y2L5 1435 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 LDHCP07864 332 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 CCDC152Q4G0S7 254 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 MEIS3Q99687 375 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 KAT14Q9H8E8 782 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 ALDH1L1O75891 902 aa13.8□□□□□ -0.2
ERGIC1-208ENST00000520399 BAG4O95429 457 aaKnown RBP13.8□□□□□ -0.2
ERGIC1-208ENST00000520399 CAPN2P17655 700 aa13.8□□□□□ -0.2
ERGIC1-208ENST00000520399 CLNS1AP54105 237 aaKnown RBP13.8□□□□□ -0.2
ERGIC1-208ENST00000520399 PYM1Q9BRP8 204 aaKnown RBP13.8□□□□□ -0.2
ERGIC1-208ENST00000520399 SNRKQ9NRH2 765 aa13.8□□□□□ -0.2
ERGIC1-208ENST00000520399 EIF4A2Q14240 407 aaKnown RBP13.8□□□□□ -0.2
ERGIC1-208ENST00000520399 CACNA2D4Q7Z3S7 1137 aa13.8□□□□□ -0.2
ERGIC1-208ENST00000520399 CCDC144CPQ8IYA2 1237 aa13.8□□□□□ -0.2
ERGIC1-208ENST00000520399 ANKRD44Q8N8A2 993 aa13.8□□□□□ -0.2
ERGIC1-208ENST00000520399 BAG3O95817 575 aa13.8□□□□□ -0.2
ERGIC1-208ENST00000520399 GSTO1P78417 241 aa13.8□□□□□ -0.2
ERGIC1-208ENST00000520399 ATP8B2P98198 1209 aa13.8□□□□□ -0.2
ERGIC1-208ENST00000520399 CHRNA2Q15822 529 aa13.8□□□□□ -0.2
ERGIC1-208ENST00000520399 NGLY1Q96IV0 654 aa13.8□□□□□ -0.2
ERGIC1-208ENST00000520399 ZCRB1Q8TBF4 217 aaKnown RBP13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 PIK3C2GO75747 1445 aa13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 EBAG9O00559 213 aa13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 HAND2P61296 217 aa13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 UBE2HP62256 183 aa13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 MYRIPQ8NFW9 859 aa13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 JARID2Q92833 1246 aaPredicted RBP13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 TMX1Q9H3N1 280 aa13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 DMRT2Q9Y5R5 561 aa13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 ABCC10Q5T3U5 1492 aa13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 DNMT1P26358 1616 aaKnown RBP13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 CHMP4BP1P59074 171 aa13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 CEP57Q86XR8 500 aa13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 C16orf45Q96MC5 204 aaPredicted RBP13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 NUP88Q99567 741 aaPredicted RBP13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 ZSCAN16Q9H4T2 348 aaPredicted RBP13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 SERPINA10Q9UK55 444 aa13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 C8orf58Q8NAV2 365 aa13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 NAA15Q9BXJ9 866 aaKnown RBP13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 UBA5Q9GZZ9 404 aa13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 KIF1CO43896 1103 aaKnown RBP13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 ANXA1P04083 346 aa13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 XAGE3Q8WTP9 111 aa13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 CALML4Q96GE6 196 aa13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 ORC3Q9UBD5 711 aaPredicted RBP13.79□□□□□ -0.2
ERGIC1-208ENST00000520399 MAST1Q9Y2H9 1570 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 MACROD2A1Z1Q3 448 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 YEATS4O95619 227 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 PDE1AP54750 535 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 GSDMDP57764 484 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 AMPD3Q01432 767 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 USP25Q9UHP3 1055 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 IKBKGQ9Y6K9 419 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 FBF1Q8TES7 1133 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 ESYT1Q9BSJ8 1104 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 SLC26A6Q9BXS9 759 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 CRNKL1Q9BZJ0 848 aaKnown RBP13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 GDPD2Q9HCC8 539 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 USO1O60763 962 aaKnown RBP13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 ZFYP08048 801 aaPredicted RBP13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 ZSCAN22P10073 491 aaPredicted RBP13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 PAFAH1B1P43034 410 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 ST5P78524 1137 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 KANK3Q6NY19 840 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 POTEDQ86YR6 584 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 SECISBP2LQ93073 1101 aaKnown RBP13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 TMX3Q96JJ7 454 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 KRT23Q9C075 422 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 CCDC171Q6TFL3 1326 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 TSPY2A6NKD2 308 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 KSR2Q6VAB6 950 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 TFIP11Q9UBB9 837 aaKnown RBP13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 NPATQ14207 1427 aa13.78□□□□□ -0.2
ERGIC1-208ENST00000520399 FLT4P35916 1363 aa13.77□□□□□ -0.2
ERGIC1-208ENST00000520399 C6orf229H3BNL8 230 aa13.77□□□□□ -0.2
ERGIC1-208ENST00000520399 CCDC172P0C7W6 258 aa13.77□□□□□ -0.2
ERGIC1-208ENST00000520399 RGS22Q8NE09 1264 aa13.77□□□□□ -0.2
ERGIC1-208ENST00000520399 NDC80O14777 642 aa13.77□□□□□ -0.2
ERGIC1-208ENST00000520399 TPD52P55327 224 aaPredicted RBP13.77□□□□□ -0.2
ERGIC1-208ENST00000520399 DBN1Q16643 649 aa13.77□□□□□ -0.2
ERGIC1-208ENST00000520399 CEP135Q66GS9 1140 aa13.77□□□□□ -0.2
ERGIC1-208ENST00000520399 PCDHB15Q9Y5E8 787 aa13.77□□□□□ -0.2
ERGIC1-208ENST00000520399 MICU3Q86XE3 530 aa13.77□□□□□ -0.21
ERGIC1-208ENST00000520399 GRM8O00222 908 aa13.77□□□□□ -0.21
ERGIC1-208ENST00000520399 KLHL40Q2TBA0 621 aa13.77□□□□□ -0.21
ERGIC1-208ENST00000520399 MAP3K5Q99683 1374 aa13.77□□□□□ -0.21
ERGIC1-208ENST00000520399 CCDC50Q8IVM0 306 aa13.77□□□□□ -0.21
ERGIC1-208ENST00000520399 RBM27Q9P2N5 1060 aaKnown RBP13.77□□□□□ -0.21
ERGIC1-208ENST00000520399 RFC4P35249 363 aa13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 MTHFSDQ2M296 383 aaKnown RBP13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 SPECC1Q5M775 1068 aa13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 ARFGAP3Q9NP61 516 aa13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 TCP11L1Q9NUJ3 509 aa13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 TRPM2O94759 1503 aa13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 APBB1IPQ7Z5R6 666 aaPredicted RBP13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 RPUSD2Q8IZ73 545 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms