RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 A0A0G2JLW4 131 aa7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 ANKRD18BA2A2Z9 1011 aa7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 KLRG2A4D1S0 409 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 HOXA10P31260 410 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 KCNJ4P48050 445 aa7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 CTSWP56202 376 aa7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 GRAPQ13588 217 aa7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 SF3B3Q15393 1217 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 ERFEQ4G0M1 354 aa7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 RTL5Q5HYW3 569 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 DPY19L2Q6NUT2 758 aa7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 PRPF40BQ6NWY9 871 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 ARHGAP27Q6ZUM4 889 aa7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 UBE3BQ7Z3V4 1068 aa7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 NUTM1Q86Y26 1132 aa7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 DZIP1LQ8IYY4 767 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 GRAPLQ8TC17 118 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 ANKRD2Q9GZV1 360 aa7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 ZBTB47Q9UFB7 747 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 NOB1Q9ULX3 412 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 DDX19BQ9UMR2 479 aa7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 CHMP3Q9Y3E7 222 aa7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 ADCY9O60503 1353 aa7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 RTL9Q8NET4 1388 aa7.02□□□□□ -1.29
CTNNA1-220ENST00000520260 KDM2BQ8NHM5 1336 aa7.01□□□□□ -1.29
CTNNA1-220ENST00000520260 TCERG1O14776 1098 aaKnown RBP7.01□□□□□ -1.29
CTNNA1-220ENST00000520260 HMMRO75330 724 aa7.01□□□□□ -1.29
CTNNA1-220ENST00000520260 BEND3Q5T5X7 828 aa7.01□□□□□ -1.29
CTNNA1-220ENST00000520260 DPP8Q6V1X1 898 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-220ENST00000520260 SMIM5Q71RC9 77 aa7.01□□□□□ -1.29
CTNNA1-220ENST00000520260 ITPRIPQ8IWB1 547 aa7.01□□□□□ -1.29
CTNNA1-220ENST00000520260 FAM89AQ96GI7 184 aa7.01□□□□□ -1.29
CTNNA1-220ENST00000520260 PLA2G12BQ9BX93 195 aa7.01□□□□□ -1.29
CTNNA1-220ENST00000520260 BCL2L13Q9BXK5 485 aa7.01□□□□□ -1.29
CTNNA1-220ENST00000520260 ANKIB1Q9P2G1 1089 aa7.01□□□□□ -1.29
CTNNA1-220ENST00000520260 FBXO3Q9UK99 471 aa7.01□□□□□ -1.29
CTNNA1-220ENST00000520260 LTBP3Q9NS15 1303 aa7.01□□□□□ -1.29
CTNNA1-220ENST00000520260 H7C1W4 665 aa7□□□□□ -1.29
CTNNA1-220ENST00000520260 GNAI2P04899 355 aa7□□□□□ -1.29
CTNNA1-220ENST00000520260 LMNB1P20700 586 aa7□□□□□ -1.29
CTNNA1-220ENST00000520260 RPS8P62241 208 aaKnown RBP7□□□□□ -1.29
CTNNA1-220ENST00000520260 FKBP4Q02790 459 aaKnown RBP eCLIP7□□□□□ -1.29
CTNNA1-220ENST00000520260 PDE3AQ14432 1141 aa7□□□□□ -1.29
CTNNA1-220ENST00000520260 HSP90AB4PQ58FF6 505 aa7□□□□□ -1.29
CTNNA1-220ENST00000520260 SP8Q8IXZ3 490 aa7□□□□□ -1.29
CTNNA1-220ENST00000520260 NLGN2Q8NFZ4 835 aa7□□□□□ -1.29
CTNNA1-220ENST00000520260 PSMD1Q99460 953 aa7□□□□□ -1.29
CTNNA1-220ENST00000520260 ATP6V0A2Q9Y487 856 aa7□□□□□ -1.29
CTNNA1-220ENST00000520260 ABCC4O15439 1325 aa7□□□□□ -1.29
CTNNA1-220ENST00000520260 AFDNP55196 1824 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-220ENST00000520260 ABCC12Q96J65 1359 aa6.99□□□□□ -1.29
CTNNA1-220ENST00000520260 HCLS1P14317 486 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-220ENST00000520260 CHRNA5P30532 468 aa6.99□□□□□ -1.29
CTNNA1-220ENST00000520260 MMP14P50281 582 aa6.99□□□□□ -1.29
CTNNA1-220ENST00000520260 EIF6P56537 245 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-220ENST00000520260 CWF19L2Q2TBE0 894 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-220ENST00000520260 INTS3Q68E01 1043 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-220ENST00000520260 C16orf71Q8IYS4 520 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-220ENST00000520260 MPNDQ8N594 471 aa6.99□□□□□ -1.29
CTNNA1-220ENST00000520260 CNNM1Q9NRU3 951 aa6.99□□□□□ -1.29
CTNNA1-220ENST00000520260 LAMB2P55268 1798 aa6.99□□□□□ -1.29
CTNNA1-220ENST00000520260 DLEC1Q9Y238 1755 aa6.99□□□□□ -1.29
CTNNA1-220ENST00000520260 XDHP47989 1333 aa6.99□□□□□ -1.29
CTNNA1-220ENST00000520260 MROH5Q6ZUA9 1318 aa6.99□□□□□ -1.29
CTNNA1-220ENST00000520260 IQCA1LA6NCM1 817 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 F6X3S4 739 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 C21orf2O43822 256 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 IGKV5-2P06315 115 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 ITGA6P23229 1130 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 ATP2B4P23634 1241 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 YY1P25490 414 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 LMOD1P29536 600 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 NBR1Q14596 966 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 TNIP1Q15025 636 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 G2E3Q7L622 706 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 VPS37DQ86XT2 251 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 ERC1Q8IUD2 1116 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 NIM1KQ8IY84 436 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 RASEFQ8IZ41 740 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 TMEM106CQ9BVX2 250 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 ZC3H12CQ9C0D7 883 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 OCEL1Q9H607 264 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 BSDC1Q9NW68 430 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 GGA1Q9UJY5 639 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 LEMD3Q9Y2U8 911 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 PCDHB13Q9Y5F0 798 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 UTYO14607 1347 aa6.98□□□□□ -1.29
CTNNA1-220ENST00000520260 ARFGEF1Q9Y6D6 1849 aa6.97□□□□□ -1.29
CTNNA1-220ENST00000520260 C6orf229H3BNL8 230 aa6.97□□□□□ -1.29
CTNNA1-220ENST00000520260 TRIM27P14373 513 aa6.97□□□□□ -1.29
CTNNA1-220ENST00000520260 OS9Q13438 667 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-220ENST00000520260 CAVIN4Q5BKX8 364 aa6.97□□□□□ -1.29
CTNNA1-220ENST00000520260 LDHAL6AQ6ZMR3 332 aa6.97□□□□□ -1.29
CTNNA1-220ENST00000520260 ZNF804AQ7Z570 1209 aa6.97□□□□□ -1.29
CTNNA1-220ENST00000520260 LARGE2Q8N3Y3 721 aa6.97□□□□□ -1.29
CTNNA1-220ENST00000520260 TTLL11Q8NHH1 800 aa6.97□□□□□ -1.29
CTNNA1-220ENST00000520260 CCDC136Q96JN2 1154 aa6.97□□□□□ -1.29
CTNNA1-220ENST00000520260 GNL3LQ9NVN8 582 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-220ENST00000520260 RNF181Q9P0P0 153 aa6.97□□□□□ -1.29
CTNNA1-220ENST00000520260 NSFL1CQ9UNZ2 370 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms