RNA–Protein interactions for RNA: ENST00000519634.5

CTNNA1-217, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-217ENST00000519634 SNRPA1P09661 255 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-217ENST00000519634 HOXA10P31260 410 aaPredicted RBP8.7□□□□□ -1.02
CTNNA1-217ENST00000519634 VARS2Q5ST30 1063 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-217ENST00000519634 RPGRQ92834 1020 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-217ENST00000519634 GLIS2Q9BZE0 524 aaPredicted RBP8.7□□□□□ -1.02
CTNNA1-217ENST00000519634 VPS33BQ9H267 617 aa8.7□□□□□ -1.02
CTNNA1-217ENST00000519634 ZNF408Q9H9D4 720 aa8.7□□□□□ -1.02
CTNNA1-217ENST00000519634 PGAP2Q9UHJ9 254 aa8.7□□□□□ -1.02
CTNNA1-217ENST00000519634 TIMELESSQ9UNS1 1208 aa8.7□□□□□ -1.02
CTNNA1-217ENST00000519634 USP16Q9Y5T5 823 aa8.7□□□□□ -1.02
CTNNA1-217ENST00000519634 SCN11AQ9UI33 1791 aa8.7□□□□□ -1.02
CTNNA1-217ENST00000519634 PPIP5K2O43314 1243 aa8.69□□□□□ -1.02
CTNNA1-217ENST00000519634 KCNQ3O43525 872 aa8.69□□□□□ -1.02
CTNNA1-217ENST00000519634 PIP4K2AP48426 406 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-217ENST00000519634 CDC37L1Q7L3B6 337 aa8.69□□□□□ -1.02
CTNNA1-217ENST00000519634 ADAM33Q9BZ11 813 aa8.69□□□□□ -1.02
CTNNA1-217ENST00000519634 TMX4Q9H1E5 349 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-217ENST00000519634 KIF7Q2M1P5 1343 aa8.69□□□□□ -1.02
CTNNA1-217ENST00000519634 CDHR2Q9BYE9 1310 aa8.69□□□□□ -1.02
CTNNA1-217ENST00000519634 LTBP1Q14766 1721 aa8.68□□□□□ -1.02
CTNNA1-217ENST00000519634 CCDC88AQ3V6T2 1871 aa8.68□□□□□ -1.02
CTNNA1-217ENST00000519634 FAM205CA6NFA0 338 aa8.68□□□□□ -1.02
CTNNA1-217ENST00000519634 PPEF1O14829 653 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-217ENST00000519634 GMPSP49915 693 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-217ENST00000519634 HUNKP57058 714 aa8.68□□□□□ -1.02
CTNNA1-217ENST00000519634 EIF4G2P78344 907 aaKnown RBP eCLIP8.68□□□□□ -1.02
CTNNA1-217ENST00000519634 CXCL9Q07325 125 aa8.68□□□□□ -1.02
CTNNA1-217ENST00000519634 C6orf132Q5T0Z8 1188 aa8.68□□□□□ -1.02
CTNNA1-217ENST00000519634 GPIHBP1Q8IV16 184 aa8.68□□□□□ -1.02
CTNNA1-217ENST00000519634 GCC1Q96CN9 775 aa8.68□□□□□ -1.02
CTNNA1-217ENST00000519634 RBM17Q96I25 401 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-217ENST00000519634 CRAMP1Q96RY5 1269 aa8.68□□□□□ -1.02
CTNNA1-217ENST00000519634 ZNRF3Q9ULT6 936 aa8.68□□□□□ -1.02
CTNNA1-217ENST00000519634 CEMIPQ8WUJ3 1361 aa8.68□□□□□ -1.02
CTNNA1-217ENST00000519634 NPC1L1Q9UHC9 1359 aa8.68□□□□□ -1.02
CTNNA1-217ENST00000519634 NBPF26B4DH59 902 aa8.67□□□□□ -1.02
CTNNA1-217ENST00000519634 HLFQ16534 295 aa8.67□□□□□ -1.02
CTNNA1-217ENST00000519634 AOC3Q16853 763 aa8.67□□□□□ -1.02
CTNNA1-217ENST00000519634 NBPF10Q6P3W6 841 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-217ENST00000519634 CTU1Q7Z7A3 348 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-217ENST00000519634 NUTM1Q86Y26 1132 aa8.67□□□□□ -1.02
CTNNA1-217ENST00000519634 NBPF15Q8N660 670 aa8.67□□□□□ -1.02
CTNNA1-217ENST00000519634 SUPT20HQ8NEM7 779 aa8.67□□□□□ -1.02
CTNNA1-217ENST00000519634 CCDC102AQ96A19 550 aa8.67□□□□□ -1.02
CTNNA1-217ENST00000519634 ABCC12Q96J65 1359 aa8.67□□□□□ -1.02
CTNNA1-217ENST00000519634 ZIC5Q96T25 663 aa8.67□□□□□ -1.02
CTNNA1-217ENST00000519634 BCL2L13Q9BXK5 485 aa8.67□□□□□ -1.02
CTNNA1-217ENST00000519634 COL4A5P29400 1685 aa8.66□□□□□ -1.02
CTNNA1-217ENST00000519634 PRAMEF22A3QJZ6 481 aa8.66□□□□□ -1.02
CTNNA1-217ENST00000519634 ERVV-1B6SEH8 477 aa8.66□□□□□ -1.02
CTNNA1-217ENST00000519634 H7C1D1 291 aa8.66□□□□□ -1.02
CTNNA1-217ENST00000519634 U2SURPO15042 1029 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-217ENST00000519634 TNIP1Q15025 636 aa8.66□□□□□ -1.02
CTNNA1-217ENST00000519634 RGMBQ6NW40 437 aa8.66□□□□□ -1.02
CTNNA1-217ENST00000519634 USP48Q86UV5 1035 aa8.66□□□□□ -1.02
CTNNA1-217ENST00000519634 ZNF687Q8N1G0 1237 aa8.66□□□□□ -1.02
CTNNA1-217ENST00000519634 HS3ST6Q96QI5 342 aa8.66□□□□□ -1.02
CTNNA1-217ENST00000519634 RNF186Q9NXI6 227 aa8.66□□□□□ -1.02
CTNNA1-217ENST00000519634 UBR2Q8IWV8 1755 aa8.66□□□□□ -1.02
CTNNA1-217ENST00000519634 ARFGEF2Q9Y6D5 1785 aa8.66□□□□□ -1.02
CTNNA1-217ENST00000519634 RIC1Q4ADV7 1423 aa8.65□□□□□ -1.02
CTNNA1-217ENST00000519634 IBTKQ9P2D0 1353 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-217ENST00000519634 FAM155AB1AL88 458 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-217ENST00000519634 TCERG1O14776 1098 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-217ENST00000519634 TRPA1O75762 1119 aa8.65□□□□□ -1.02
CTNNA1-217ENST00000519634 HSPA5P11021 654 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-217ENST00000519634 PTPREP23469 700 aa8.65□□□□□ -1.02
CTNNA1-217ENST00000519634 HIRAP54198 1017 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-217ENST00000519634 KIF23Q02241 960 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-217ENST00000519634 PTGDRQ13258 359 aa8.65□□□□□ -1.02
CTNNA1-217ENST00000519634 PKN2Q16513 984 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-217ENST00000519634 TSR1Q2NL82 804 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-217ENST00000519634 C2orf69Q8N8R5 385 aa8.65□□□□□ -1.02
CTNNA1-217ENST00000519634 TRPM4Q8TD43 1214 aa8.65□□□□□ -1.02
CTNNA1-217ENST00000519634 RTFDC1Q9BY42 306 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-217ENST00000519634 GBA2Q9HCG7 927 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-217ENST00000519634 ATP6V0A2Q9Y487 856 aa8.65□□□□□ -1.02
CTNNA1-217ENST00000519634 POTEB3A0JP26 581 aa8.64□□□□□ -1.03
CTNNA1-217ENST00000519634 GPR37O15354 613 aa8.64□□□□□ -1.03
CTNNA1-217ENST00000519634 RAD17O75943 681 aa8.64□□□□□ -1.03
CTNNA1-217ENST00000519634 PBX2P40425 430 aa8.64□□□□□ -1.03
CTNNA1-217ENST00000519634 ZNF157P51786 506 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-217ENST00000519634 KIAA2012Q0VF49 1180 aa8.64□□□□□ -1.03
CTNNA1-217ENST00000519634 POTEBQ6S5H4 581 aa8.64□□□□□ -1.03
CTNNA1-217ENST00000519634 DPP8Q6V1X1 898 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-217ENST00000519634 KIF6Q6ZMV9 814 aa8.64□□□□□ -1.03
CTNNA1-217ENST00000519634 RTF1Q92541 710 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-217ENST00000519634 NPDC1Q9NQX5 325 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-217ENST00000519634 CNOT7Q9UIV1 285 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-217ENST00000519634 HPS5Q9UPZ3 1129 aa8.64□□□□□ -1.03
CTNNA1-217ENST00000519634 MAP3K15Q6ZN16 1313 aa8.63□□□□□ -1.03
CTNNA1-217ENST00000519634 TNRC18O15417 2968 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-217ENST00000519634 KRT26Q7Z3Y9 468 aa8.63□□□□□ -1.03
CTNNA1-217ENST00000519634 DPF2Q92785 391 aa8.63□□□□□ -1.03
CTNNA1-217ENST00000519634 NLRP3Q96P20 1036 aa8.63□□□□□ -1.03
CTNNA1-217ENST00000519634 UBN2Q6ZU65 1347 aa8.62□□□□□ -1.03
CTNNA1-217ENST00000519634 ARHGAP33O14559 1287 aa8.62□□□□□ -1.03
CTNNA1-217ENST00000519634 ZMYND10O75800 440 aa8.62□□□□□ -1.03
CTNNA1-217ENST00000519634 BBOX1O75936 387 aa8.62□□□□□ -1.03
CTNNA1-217ENST00000519634 SLC10A3P09131 477 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms