RNA–Protein interactions for RNA: ENST00000519632.5

SHPRH-207, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 5,245 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-207ENST00000519632 LMNTD2Q8IXW0 634 aa13.91□□□□□ -0.18
SHPRH-207ENST00000519632 IRX5P78411 483 aaPredicted RBP13.91□□□□□ -0.18
SHPRH-207ENST00000519632 CNGA4Q8IV77 575 aa13.91□□□□□ -0.18
SHPRH-207ENST00000519632 CEP85LQ5SZL2 805 aa13.9□□□□□ -0.18
SHPRH-207ENST00000519632 ATL3Q6DD88 541 aa13.9□□□□□ -0.18
SHPRH-207ENST00000519632 RUFY3Q7L099 469 aa13.9□□□□□ -0.18
SHPRH-207ENST00000519632 DDX41Q9UJV9 622 aaKnown RBP13.9□□□□□ -0.18
SHPRH-207ENST00000519632 PEG3Q9GZU2 1588 aa13.9□□□□□ -0.18
SHPRH-207ENST00000519632 MARCKSP29966 332 aaPredicted RBP13.9□□□□□ -0.18
SHPRH-207ENST00000519632 ABTB2Q8N961 1025 aa13.9□□□□□ -0.18
SHPRH-207ENST00000519632 GOLGA8AA7E2F4 631 aa13.9□□□□□ -0.18
SHPRH-207ENST00000519632 IFT81Q8WYA0 676 aa13.9□□□□□ -0.18
SHPRH-207ENST00000519632 SELENOSQ9BQE4 189 aa13.9□□□□□ -0.18
SHPRH-207ENST00000519632 ZBTB7BO15156 539 aaPredicted RBP13.9□□□□□ -0.18
SHPRH-207ENST00000519632 IARSP41252 1262 aaKnown RBP13.9□□□□□ -0.18
SHPRH-207ENST00000519632 PPFIA1Q13136 1202 aa13.9□□□□□ -0.18
SHPRH-207ENST00000519632 TAF7Q15545 349 aaPredicted RBP13.9□□□□□ -0.18
SHPRH-207ENST00000519632 Q6ZUG5 572 aa13.9□□□□□ -0.18
SHPRH-207ENST00000519632 PYM1Q9BRP8 204 aaKnown RBP13.9□□□□□ -0.18
SHPRH-207ENST00000519632 STMN4Q9H169 189 aaPredicted RBP13.9□□□□□ -0.18
SHPRH-207ENST00000519632 CEP126Q9P2H0 1117 aa13.9□□□□□ -0.18
SHPRH-207ENST00000519632 TTF2Q9UNY4 1162 aaKnown RBP13.9□□□□□ -0.18
SHPRH-207ENST00000519632 NOP2P46087 812 aaKnown RBP13.89□□□□□ -0.19
SHPRH-207ENST00000519632 CDK13Q14004 1512 aaKnown RBP13.89□□□□□ -0.19
SHPRH-207ENST00000519632 MYO1BO43795 1136 aa13.89□□□□□ -0.19
SHPRH-207ENST00000519632 ETF1P62495 437 aaKnown RBP13.89□□□□□ -0.19
SHPRH-207ENST00000519632 RRAGBQ5VZM2 374 aa13.89□□□□□ -0.19
SHPRH-207ENST00000519632 SLC12A7Q9Y666 1083 aa13.89□□□□□ -0.19
SHPRH-207ENST00000519632 MYO1CO00159 1063 aa13.89□□□□□ -0.19
SHPRH-207ENST00000519632 NUTM2GQ5VZR2 741 aa13.89□□□□□ -0.19
SHPRH-207ENST00000519632 VEZTQ9HBM0 779 aa13.89□□□□□ -0.19
SHPRH-207ENST00000519632 CC2D2AQ9P2K1 1620 aa13.88□□□□□ -0.19
SHPRH-207ENST00000519632 ZNF213O14771 459 aa13.88□□□□□ -0.19
SHPRH-207ENST00000519632 SETSIPP0DME0 302 aa13.88□□□□□ -0.19
SHPRH-207ENST00000519632 PCK1P35558 622 aa13.88□□□□□ -0.19
SHPRH-207ENST00000519632 LRRC2Q9BYS8 371 aa13.88□□□□□ -0.19
SHPRH-207ENST00000519632 BRD2P25440 801 aaKnown RBP13.88□□□□□ -0.19
SHPRH-207ENST00000519632 ATP11AP98196 1134 aa13.88□□□□□ -0.19
SHPRH-207ENST00000519632 NCBP1Q09161 790 aaKnown RBP13.88□□□□□ -0.19
SHPRH-207ENST00000519632 PRPF4BQ13523 1007 aaKnown RBP13.88□□□□□ -0.19
SHPRH-207ENST00000519632 IFI16Q16666 785 aaKnown RBP13.88□□□□□ -0.19
SHPRH-207ENST00000519632 SOGA3Q5TF21 947 aa13.88□□□□□ -0.19
SHPRH-207ENST00000519632 FAM71BQ8TC56 605 aa13.88□□□□□ -0.19
SHPRH-207ENST00000519632 LEO1Q8WVC0 666 aaPredicted RBP13.88□□□□□ -0.19
SHPRH-207ENST00000519632 TRIM47Q96LD4 638 aa13.88□□□□□ -0.19
SHPRH-207ENST00000519632 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.88□□□□□ -0.193e-9■■■■■ 73.7
SHPRH-207ENST00000519632 E2F4Q16254 413 aa13.88□□□□□ -0.19
SHPRH-207ENST00000519632 CABS1Q96KC9 395 aa13.88□□□□□ -0.19
SHPRH-207ENST00000519632 CEP63Q96MT8 703 aa13.88□□□□□ -0.19
SHPRH-207ENST00000519632 CNNM1Q9NRU3 951 aa13.88□□□□□ -0.19
SHPRH-207ENST00000519632 RMND1Q9NWS8 449 aa13.88□□□□□ -0.19
SHPRH-207ENST00000519632 SPATS2Q86XZ4 545 aaKnown RBP13.88□□□□□ -0.19
SHPRH-207ENST00000519632 ANKRD24Q8TF21 1146 aa13.88□□□□□ -0.19
SHPRH-207ENST00000519632 A0A1B0GVL5 298 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 GNAT3A8MTJ3 354 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 HPDP32754 393 aaPredicted RBP13.87□□□□□ -0.19
SHPRH-207ENST00000519632 LARP1Q6PKG0 1096 aaKnown RBP13.87□□□□□ -0.19
SHPRH-207ENST00000519632 NUTM2AQ8IVF1 878 aaPredicted RBP13.87□□□□□ -0.19
SHPRH-207ENST00000519632 EXOC4Q96A65 974 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 MRFAP1L1Q96HT8 127 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 IFT74Q96LB3 600 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 TTC14Q96N46 770 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 MED4Q9NPJ6 270 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 A0A087WUV0 522 aaPredicted RBP13.87□□□□□ -0.19
SHPRH-207ENST00000519632 AFMP43652 599 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 ATP8B2P98198 1209 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 CCDC122Q5T0U0 273 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 FAM173BQ6P4H8 233 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 SPATS2LQ9NUQ6 558 aaKnown RBP13.87□□□□□ -0.19
SHPRH-207ENST00000519632 CCDC160A6NGH7 325 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 CREB3L3Q68CJ9 461 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 MICAL1Q8TDZ2 1067 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 SELENOOQ9BVL4 669 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 PDE11AQ9HCR9 933 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 IFIT1P09914 478 aaKnown RBP13.87□□□□□ -0.19
SHPRH-207ENST00000519632 KIAA0753Q2KHM9 967 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 MCTP2Q6DN12 878 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 CCDC82Q8N4S0 544 aa13.87□□□□□ -0.19
SHPRH-207ENST00000519632 SEC31AO94979 1220 aaKnown RBP13.86□□□□□ -0.19
SHPRH-207ENST00000519632 PPP2R5AQ15172 486 aa13.86□□□□□ -0.19
SHPRH-207ENST00000519632 AIDAQ96BJ3 306 aa13.86□□□□□ -0.19
SHPRH-207ENST00000519632 METAP2P50579 478 aaKnown RBP eCLIP13.86□□□□□ -0.19
SHPRH-207ENST00000519632 GNGT1P63211 74 aa13.86□□□□□ -0.19
SHPRH-207ENST00000519632 PNMA8AQ86V59 439 aaPredicted RBP13.86□□□□□ -0.19
SHPRH-207ENST00000519632 THEMISQ8N1K5 641 aaPredicted RBP13.86□□□□□ -0.19
SHPRH-207ENST00000519632 OTUD7AQ8TE49 926 aaPredicted RBP13.86□□□□□ -0.19
SHPRH-207ENST00000519632 CPA1P15085 419 aa13.86□□□□□ -0.19
SHPRH-207ENST00000519632 ARID4AP29374 1257 aaPredicted RBP13.86□□□□□ -0.19
SHPRH-207ENST00000519632 FBXO38Q6PIJ6 1188 aa13.86□□□□□ -0.19
SHPRH-207ENST00000519632 RTEL1-TNFRSF6BF6WH68 1400 aa13.86□□□□□ -0.19
SHPRH-207ENST00000519632 MYL6BP14649 208 aa13.86□□□□□ -0.19
SHPRH-207ENST00000519632 CCDC42Q96M95 316 aa13.86□□□□□ -0.19
SHPRH-207ENST00000519632 SWAP70Q9UH65 585 aa13.86□□□□□ -0.19
SHPRH-207ENST00000519632 BAIAP2L1Q9UHR4 511 aa13.86□□□□□ -0.19
SHPRH-207ENST00000519632 KLF18A0A0U1RQI7 1052 aa13.85□□□□□ -0.19
SHPRH-207ENST00000519632 RAD51AP2Q09MP3 1159 aa13.85□□□□□ -0.19
SHPRH-207ENST00000519632 RAB11FIP4Q86YS3 637 aa13.85□□□□□ -0.19
SHPRH-207ENST00000519632 BCAS4Q8TDM0 211 aa13.85□□□□□ -0.19
SHPRH-207ENST00000519632 XPO4Q9C0E2 1151 aaKnown RBP13.85□□□□□ -0.19
SHPRH-207ENST00000519632 PSDA5PKW4 1024 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 313.9 ms