RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, human

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-208	ENST00000519481	LRRC37A	A6NMS7	1700 aa		13.96	□□□□□ -0.17
PVT1-208	ENST00000519481	PSMD14	O00487	310 aa		13.96	□□□□□ -0.17
PVT1-208	ENST00000519481	ECE2	O60344	883 aa		13.96	□□□□□ -0.17
PVT1-208	ENST00000519481	UFL1	O94874	794 aa		13.96	□□□□□ -0.17
PVT1-208	ENST00000519481	ZEB1	P37275	1124 aa	Predicted RBP	13.96	□□□□□ -0.17
PVT1-208	ENST00000519481	DOK7	Q18PE1	504 aa		13.96	□□□□□ -0.17
PVT1-208	ENST00000519481	CCDC27	Q2M243	656 aa		13.96	□□□□□ -0.17
PVT1-208	ENST00000519481	CST9	Q5W186	159 aa		13.96	□□□□□ -0.17
PVT1-208	ENST00000519481	KSR2	Q6VAB6	950 aa		13.96	□□□□□ -0.17
PVT1-208	ENST00000519481	ANKRD18A	Q8IVF6	992 aa		13.96	□□□□□ -0.17
PVT1-208	ENST00000519481	TBC1D16	Q8TBP0	767 aa		13.96	□□□□□ -0.17
PVT1-208	ENST00000519481	GPR101	Q96P66	508 aa	Predicted RBP	13.96	□□□□□ -0.17
PVT1-208	ENST00000519481	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.96	□□□□□ -0.17
PVT1-208	ENST00000519481	SEC31B	Q9NQW1	1179 aa		13.96	□□□□□ -0.17
PVT1-208	ENST00000519481	PODXL2	Q9NZ53	605 aa		13.96	□□□□□ -0.17
PVT1-208	ENST00000519481	GGA1	Q9UJY5	639 aa		13.96	□□□□□ -0.17
PVT1-208	ENST00000519481	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.96	□□□□□ -0.17
PVT1-208	ENST00000519481	PI4KAP2	A4QPH2	592 aa		13.95	□□□□□ -0.18
PVT1-208	ENST00000519481	TWISTNB	Q3B726	338 aa	Predicted RBP	13.95	□□□□□ -0.18
PVT1-208	ENST00000519481	CYP4F22	Q6NT55	531 aa		13.95	□□□□□ -0.18
PVT1-208	ENST00000519481	TSPYL6	Q8N831	410 aa		13.95	□□□□□ -0.18
PVT1-208	ENST00000519481	PI4KAP1	Q8N8J0	262 aa		13.95	□□□□□ -0.18
PVT1-208	ENST00000519481	TRPM4	Q8TD43	1214 aa		13.95	□□□□□ -0.18
PVT1-208	ENST00000519481	TSR2	Q969E8	191 aa	Known RBP	13.95	□□□□□ -0.18
PVT1-208	ENST00000519481	CDC5L	Q99459	802 aa	Known RBP	13.95	□□□□□ -0.18
PVT1-208	ENST00000519481	ZNF408	Q9H9D4	720 aa		13.95	□□□□□ -0.18
PVT1-208	ENST00000519481	DUOX1	Q9NRD9	1551 aa		13.95	□□□□□ -0.18
PVT1-208	ENST00000519481	TRPM7	Q96QT4	1865 aa		13.95	□□□□□ -0.18
PVT1-208	ENST00000519481	IL16	Q14005	1332 aa		13.94	□□□□□ -0.18
PVT1-208	ENST00000519481	ANP32C	O43423	234 aa		13.94	□□□□□ -0.18
PVT1-208	ENST00000519481	LBX1	P52954	281 aa		13.94	□□□□□ -0.18
PVT1-208	ENST00000519481	HIRA	P54198	1017 aa	Predicted RBP	13.94	□□□□□ -0.18
PVT1-208	ENST00000519481	WWC1	Q8IX03	1113 aa		13.94	□□□□□ -0.18
PVT1-208	ENST00000519481	JARID2	Q92833	1246 aa	Predicted RBP	13.94	□□□□□ -0.18
PVT1-208	ENST00000519481	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.94	□□□□□ -0.18
PVT1-208	ENST00000519481	MRS2	Q9HD23	443 aa		13.94	□□□□□ -0.18
PVT1-208	ENST00000519481	XDH	P47989	1333 aa		13.93	□□□□□ -0.18
PVT1-208	ENST00000519481	ATP2B4	P23634	1241 aa		13.93	□□□□□ -0.18
PVT1-208	ENST00000519481	MAP2K2	P36507	400 aa		13.93	□□□□□ -0.18
PVT1-208	ENST00000519481	CTSW	P56202	376 aa		13.93	□□□□□ -0.18
PVT1-208	ENST00000519481	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.93	□□□□□ -0.18
PVT1-208	ENST00000519481	SAPCD2	Q86UD0	394 aa		13.93	□□□□□ -0.18
PVT1-208	ENST00000519481	USP48	Q86UV5	1035 aa		13.93	□□□□□ -0.18
PVT1-208	ENST00000519481	DCPS	Q96C86	337 aa	Known RBP	13.93	□□□□□ -0.18
PVT1-208	ENST00000519481	HHIPL1	Q96JK4	782 aa		13.93	□□□□□ -0.18
PVT1-208	ENST00000519481	SHTN1	A0MZ66	631 aa		13.92	□□□□□ -0.18
PVT1-208	ENST00000519481	SLC4A2	P04920	1241 aa		13.92	□□□□□ -0.18
PVT1-208	ENST00000519481	HSPA8	P11142	646 aa	Known RBP	13.92	□□□□□ -0.18
PVT1-208	ENST00000519481	CCDC184	Q52MB2	194 aa		13.92	□□□□□ -0.18
PVT1-208	ENST00000519481	RBM26	Q5T8P6	1007 aa	Known RBP	13.92	□□□□□ -0.18
PVT1-208	ENST00000519481	SAMD7	Q7Z3H4	446 aa		13.92	□□□□□ -0.18
PVT1-208	ENST00000519481	IGKV5-2	P06315	115 aa		13.91	□□□□□ -0.18
PVT1-208	ENST00000519481	VIL1	P09327	827 aa	Known RBP	13.91	□□□□□ -0.18
PVT1-208	ENST00000519481	KRT26	Q7Z3Y9	468 aa		13.91	□□□□□ -0.18
PVT1-208	ENST00000519481	MYH16	Q9H6N6	1097 aa		13.91	□□□□□ -0.18
PVT1-208	ENST00000519481	NEURL1B	A8MQ27	555 aa		13.9	□□□□□ -0.18
PVT1-208	ENST00000519481	KIF4B	Q2VIQ3	1234 aa		13.9	□□□□□ -0.18
PVT1-208	ENST00000519481	TTLL11	Q8NHH1	800 aa		13.9	□□□□□ -0.18
PVT1-208	ENST00000519481	KCNQ5	Q9NR82	932 aa		13.9	□□□□□ -0.18
PVT1-208	ENST00000519481	RTL9	Q8NET4	1388 aa		13.9	□□□□□ -0.18
PVT1-208	ENST00000519481	CA12	O43570	354 aa		13.89	□□□□□ -0.19
PVT1-208	ENST00000519481	AOC2	O75106	756 aa		13.89	□□□□□ -0.19
PVT1-208	ENST00000519481	IGHMBP2	P38935	993 aa	Known RBP	13.89	□□□□□ -0.19
PVT1-208	ENST00000519481	HUNK	P57058	714 aa		13.89	□□□□□ -0.19
PVT1-208	ENST00000519481	FLII	Q13045	1269 aa		13.89	□□□□□ -0.19
PVT1-208	ENST00000519481	FKBP5	Q13451	457 aa	Predicted RBP	13.89	□□□□□ -0.19
PVT1-208	ENST00000519481	CWF19L2	Q2TBE0	894 aa	Known RBP	13.89	□□□□□ -0.19
PVT1-208	ENST00000519481	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.89	□□□□□ -0.19
PVT1-208	ENST00000519481	UBE3B	Q7Z3V4	1068 aa		13.89	□□□□□ -0.19
PVT1-208	ENST00000519481	PODN	Q7Z5L7	613 aa		13.89	□□□□□ -0.19
PVT1-208	ENST00000519481	SULF1	Q8IWU6	871 aa		13.89	□□□□□ -0.19
PVT1-208	ENST00000519481	C2orf69	Q8N8R5	385 aa		13.89	□□□□□ -0.19
PVT1-208	ENST00000519481	AGBL3	Q8NEM8	1001 aa		13.89	□□□□□ -0.19
PVT1-208	ENST00000519481	BSDC1	Q9NW68	430 aa	Predicted RBP	13.89	□□□□□ -0.19
PVT1-208	ENST00000519481	NOG	Q13253	232 aa		13.88	□□□□□ -0.19
PVT1-208	ENST00000519481	G2E3	Q7L622	706 aa		13.88	□□□□□ -0.19
PVT1-208	ENST00000519481	WDR63	Q8IWG1	891 aa		13.88	□□□□□ -0.19
PVT1-208	ENST00000519481	GREM2	Q9H772	168 aa		13.88	□□□□□ -0.19
PVT1-208	ENST00000519481	SALL2	Q9Y467	1007 aa	Predicted RBP	13.88	□□□□□ -0.19
PVT1-208	ENST00000519481	COL4A1	P02462	1669 aa		13.88	□□□□□ -0.19
PVT1-208	ENST00000519481	USP17L3	A6NCW0	530 aa		13.87	□□□□□ -0.19
PVT1-208	ENST00000519481	USP17L4	A6NCW7	530 aa		13.87	□□□□□ -0.19
PVT1-208	ENST00000519481	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.87	□□□□□ -0.19
PVT1-208	ENST00000519481		H7C1W4	665 aa		13.87	□□□□□ -0.19
PVT1-208	ENST00000519481	BRPF1	P55201	1214 aa	Predicted RBP	13.87	□□□□□ -0.19
PVT1-208	ENST00000519481	GCKR	Q14397	625 aa		13.87	□□□□□ -0.19
PVT1-208	ENST00000519481	USP17L1	Q7RTZ2	530 aa		13.87	□□□□□ -0.19
PVT1-208	ENST00000519481	DNAAF4	Q8WXU2	420 aa		13.87	□□□□□ -0.19
PVT1-208	ENST00000519481	MPHOSPH8	Q99549	860 aa		13.87	□□□□□ -0.19
PVT1-208	ENST00000519481	GBA2	Q9HCG7	927 aa	Predicted RBP	13.87	□□□□□ -0.19
PVT1-208	ENST00000519481	GGA3	Q9NZ52	723 aa		13.87	□□□□□ -0.19
PVT1-208	ENST00000519481	MINPP1	Q9UNW1	487 aa		13.87	□□□□□ -0.19
PVT1-208	ENST00000519481	FANCI	Q9NVI1	1328 aa		13.87	□□□□□ -0.19
PVT1-208	ENST00000519481	EGFR	P00533	1210 aa		13.86	□□□□□ -0.19
PVT1-208	ENST00000519481	USP17L8	P0C7I0	530 aa		13.86	□□□□□ -0.19
PVT1-208	ENST00000519481	CCT4	P50991	539 aa	Known RBP	13.86	□□□□□ -0.19
PVT1-208	ENST00000519481	ZNF280A	P59817	542 aa	Predicted RBP	13.86	□□□□□ -0.19
PVT1-208	ENST00000519481	LINS1	Q8NG48	757 aa		13.86	□□□□□ -0.19
PVT1-208	ENST00000519481	ANKRD2	Q9GZV1	360 aa		13.86	□□□□□ -0.19
PVT1-208	ENST00000519481	LEMD3	Q9Y2U8	911 aa		13.86	□□□□□ -0.19

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