RNA–Protein interactions for RNA: ENST00000518872.1

SYNPO-203, Transcript of synaptopodin, humanhuman

TSL 5

Gene SYNPO, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-203ENST00000518872 XDHP47989 1333 aa37.76■■■■□ 3.64
SYNPO-203ENST00000518872 GGA1Q9UJY5 639 aa37.75■■■■□ 3.63
SYNPO-203ENST00000518872 RAD17O75943 681 aa37.74■■■■□ 3.63
SYNPO-203ENST00000518872 CLEC11AQ9Y240 323 aa37.74■■■■□ 3.63
SYNPO-203ENST00000518872 UFL1O94874 794 aa37.73■■■■□ 3.63
SYNPO-203ENST00000518872 ZC3H12CQ9C0D7 883 aaKnown RBP37.73■■■■□ 3.63
SYNPO-203ENST00000518872 CREBZFQ9NS37 354 aa37.73■■■■□ 3.63
SYNPO-203ENST00000518872 ADARB2Q9NS39 739 aaKnown RBP37.73■■■■□ 3.63
SYNPO-203ENST00000518872 RIMBP2O15034 1052 aa37.72■■■■□ 3.63
SYNPO-203ENST00000518872 GMPSP49915 693 aaPredicted RBP37.72■■■■□ 3.63
SYNPO-203ENST00000518872 DBNDD1Q9H9R9 158 aa37.72■■■■□ 3.63
SYNPO-203ENST00000518872 SCN9AQ15858 1988 aa37.71■■■■□ 3.63
SYNPO-203ENST00000518872 ALDH1L1O75891 902 aa37.71■■■■□ 3.63
SYNPO-203ENST00000518872 TRMT2AQ8IZ69 625 aaKnown RBP37.71■■■■□ 3.63
SYNPO-203ENST00000518872 JMYQ8N9B5 988 aa37.71■■■■□ 3.63
SYNPO-203ENST00000518872 PSME4Q14997 1843 aa37.71■■■■□ 3.63
SYNPO-203ENST00000518872 ECE2O60344 883 aa37.7■■■■□ 3.63
SYNPO-203ENST00000518872 ATP2B4P23634 1241 aa37.7■■■■□ 3.63
SYNPO-203ENST00000518872 CNTROBQ8N137 903 aa37.7■■■■□ 3.63
SYNPO-203ENST00000518872 MRPL50Q8N5N7 158 aaKnown RBP37.69■■■■□ 3.62
SYNPO-203ENST00000518872 MINPP1Q9UNW1 487 aa37.69■■■■□ 3.62
SYNPO-203ENST00000518872 ITGA6P23229 1130 aa37.68■■■■□ 3.62
SYNPO-203ENST00000518872 DPF2Q92785 391 aa37.68■■■■□ 3.62
SYNPO-203ENST00000518872 GPR101Q96P66 508 aaPredicted RBP37.68■■■■□ 3.62
SYNPO-203ENST00000518872 BCL2L13Q9BXK5 485 aa37.68■■■■□ 3.62
SYNPO-203ENST00000518872 GRM8O00222 908 aa37.67■■■■□ 3.62
SYNPO-203ENST00000518872 IGHMBP2P38935 993 aaKnown RBP37.67■■■■□ 3.62
SYNPO-203ENST00000518872 FAM161AQ3B820 660 aa37.67■■■■□ 3.62
SYNPO-203ENST00000518872 MAP1SQ66K74 1059 aaPredicted RBP37.67■■■■□ 3.62
SYNPO-203ENST00000518872 PTPRCP08575 1304 aa37.66■■■■□ 3.62
SYNPO-203ENST00000518872 CDCA7LQ96GN5 454 aa37.66■■■■□ 3.62
SYNPO-203ENST00000518872 PSMD14O00487 310 aa37.65■■■■□ 3.62
SYNPO-203ENST00000518872 FOXO4P98177 505 aa37.65■■■■□ 3.62
SYNPO-203ENST00000518872 DOK7Q18PE1 504 aa37.65■■■■□ 3.62
SYNPO-203ENST00000518872 SRCIN1Q9C0H9 1055 aa37.65■■■■□ 3.62
SYNPO-203ENST00000518872 ZNF609O15014 1411 aa37.64■■■■□ 3.62
SYNPO-203ENST00000518872 RPS12P25398 132 aaKnown RBP37.64■■■■□ 3.62
SYNPO-203ENST00000518872 MED23Q9ULK4 1368 aa37.64■■■■□ 3.62
SYNPO-203ENST00000518872 CT47B1P0C2W7 299 aaPredicted RBP37.63■■■■□ 3.61
SYNPO-203ENST00000518872 ALDH1L2Q3SY69 923 aa37.63■■■■□ 3.61
SYNPO-203ENST00000518872 SSH1Q8WYL5 1049 aa37.63■■■■□ 3.61
SYNPO-203ENST00000518872 PGAP2Q9UHJ9 254 aa37.62■■■■□ 3.61
SYNPO-203ENST00000518872 CNOT7Q9UIV1 285 aaKnown RBP37.62■■■■□ 3.61
SYNPO-203ENST00000518872 TRPM7Q96QT4 1865 aa37.61■■■■□ 3.61
SYNPO-203ENST00000518872 SLC4A10Q6U841 1118 aa37.61■■■■□ 3.61
SYNPO-203ENST00000518872 ANKRD18BA2A2Z9 1011 aa37.6■■■■□ 3.61
SYNPO-203ENST00000518872 TMEM88BA6NKF7 163 aa37.6■■■■□ 3.61
SYNPO-203ENST00000518872 VIL1P09327 827 aaKnown RBP37.6■■■■□ 3.61
SYNPO-203ENST00000518872 CCT4P50991 539 aaKnown RBP37.6■■■■□ 3.61
SYNPO-203ENST00000518872 ZC3H15Q8WU90 426 aaKnown RBP37.6■■■■□ 3.61
SYNPO-203ENST00000518872 MPHOSPH8Q99549 860 aa37.6■■■■□ 3.61
SYNPO-203ENST00000518872 KCNQ5Q9NR82 932 aa37.6■■■■□ 3.61
SYNPO-203ENST00000518872 C9orf78Q9NZ63 289 aaPredicted RBP37.6■■■■□ 3.61
SYNPO-203ENST00000518872 LEMD3Q9Y2U8 911 aa37.6■■■■□ 3.61
SYNPO-203ENST00000518872 H7C1D1 291 aa37.59■■■■□ 3.61
SYNPO-203ENST00000518872 ANKRD2Q9GZV1 360 aa37.59■■■■□ 3.61
SYNPO-203ENST00000518872 ZBTB12Q9Y330 459 aaPredicted RBP37.59■■■■□ 3.61
SYNPO-203ENST00000518872 UTYO14607 1347 aa37.59■■■■□ 3.61
SYNPO-203ENST00000518872 G3V3G9 751 aa37.58■■■■□ 3.61
SYNPO-203ENST00000518872 DCAF8Q5TAQ9 597 aa37.58■■■■□ 3.61
SYNPO-203ENST00000518872 PODNQ7Z5L7 613 aa37.58■■■■□ 3.61
SYNPO-203ENST00000518872 MICALL2Q8IY33 904 aa37.58■■■■□ 3.61
SYNPO-203ENST00000518872 A0A1B0GUL6 1792 aa37.57■■■■□ 3.61
SYNPO-203ENST00000518872 IFIT5Q13325 482 aaKnown RBP37.57■■■■□ 3.6
SYNPO-203ENST00000518872 EPHA10Q5JZY3 1008 aa37.56■■■■□ 3.6
SYNPO-203ENST00000518872 HIRAP54198 1017 aaPredicted RBP37.55■■■■□ 3.6
SYNPO-203ENST00000518872 LMBR1LQ6UX01 489 aa37.55■■■■□ 3.6
SYNPO-203ENST00000518872 TRPM4Q8TD43 1214 aa37.54■■■■□ 3.6
SYNPO-203ENST00000518872 CNTNAP1P78357 1384 aa37.54■■■■□ 3.6
SYNPO-203ENST00000518872 SHTN1A0MZ66 631 aa37.53■■■■□ 3.6
SYNPO-203ENST00000518872 WTIPA6NIX2 430 aaPredicted RBP37.53■■■■□ 3.6
SYNPO-203ENST00000518872 PCNTO95613 3336 aa37.53■■■■□ 3.6
SYNPO-203ENST00000518872 ZNF646O15015 1829 aaPredicted RBP37.52■■■■□ 3.6
SYNPO-203ENST00000518872 DIEXFQ68CQ4 756 aaKnown RBP37.52■■■■□ 3.6
SYNPO-203ENST00000518872 AGBL3Q8NEM8 1001 aa37.52■■■■□ 3.6
SYNPO-203ENST00000518872 ZNF804BA4D1E1 1349 aa37.52■■■■□ 3.6
SYNPO-203ENST00000518872 BRPF1P55201 1214 aaPredicted RBP37.51■■■■□ 3.6
SYNPO-203ENST00000518872 CHRNDQ07001 517 aa37.51■■■■□ 3.6
SYNPO-203ENST00000518872 RSBN1LQ6PCB5 846 aaPredicted RBP37.5■■■■□ 3.59
SYNPO-203ENST00000518872 COA1Q9GZY4 146 aa37.5■■■■□ 3.59
SYNPO-203ENST00000518872 CHMP3Q9Y3E7 222 aa37.5■■■■□ 3.59
SYNPO-203ENST00000518872 NBPF7P0C2Y1 421 aaPredicted RBP37.49■■■■□ 3.59
SYNPO-203ENST00000518872 CCDC57Q2TAC2 916 aa37.49■■■■□ 3.59
SYNPO-203ENST00000518872 KAZALD1Q96I82 304 aa37.49■■■■□ 3.59
SYNPO-203ENST00000518872 SMC4Q9NTJ3 1288 aa37.49■■■■□ 3.59
SYNPO-203ENST00000518872 SUCLG2Q96I99 432 aa37.48■■■■□ 3.59
SYNPO-203ENST00000518872 USP17L3A6NCW0 530 aa37.47■■■■□ 3.59
SYNPO-203ENST00000518872 USP17L4A6NCW7 530 aa37.47■■■■□ 3.59
SYNPO-203ENST00000518872 USP17L1Q7RTZ2 530 aa37.47■■■■□ 3.59
SYNPO-203ENST00000518872 SAMD7Q7Z3H4 446 aa37.47■■■■□ 3.59
SYNPO-203ENST00000518872 GMLQ99445 158 aa37.47■■■■□ 3.59
SYNPO-203ENST00000518872 MKRN1Q9UHC7 482 aaKnown RBP37.47■■■■□ 3.59
SYNPO-203ENST00000518872 POLR2AP24928 1970 aaKnown RBP37.47■■■■□ 3.59
SYNPO-203ENST00000518872 RASSF10A6NK89 507 aa37.46■■■■□ 3.59
SYNPO-203ENST00000518872 C15orf52Q6ZUT6 534 aaKnown RBP37.46■■■■□ 3.59
SYNPO-203ENST00000518872 TXNRD3Q86VQ6 643 aa37.46■■■■□ 3.59
SYNPO-203ENST00000518872 MIER1Q8N108 512 aa37.46■■■■□ 3.59
SYNPO-203ENST00000518872 ZNF280AP59817 542 aaPredicted RBP37.45■■■■□ 3.59
SYNPO-203ENST00000518872 RABL6Q3YEC7 729 aaPredicted RBP37.45■■■■□ 3.59
SYNPO-203ENST00000518872 CDC37L1Q7L3B6 337 aa37.45■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms