RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 CENPBP07199 599 aaPredicted RBP23.3■■□□□ 1.32
TFF3-204ENST00000518498 CALD1Q05682 793 aaKnown RBP23.3■■□□□ 1.32
TFF3-204ENST00000518498 TSKSQ9UJT2 592 aa23.3■■□□□ 1.32
TFF3-204ENST00000518498 HSP90B1P14625 803 aaKnown RBP23.29■■□□□ 1.32
TFF3-204ENST00000518498 DOK7Q18PE1 504 aa23.29■■□□□ 1.32
TFF3-204ENST00000518498 WDR63Q8IWG1 891 aa23.29■■□□□ 1.32
TFF3-204ENST00000518498 WWC1Q8IX03 1113 aa23.29■■□□□ 1.32
TFF3-204ENST00000518498 ZNF521Q96K83 1311 aa23.29■■□□□ 1.32
TFF3-204ENST00000518498 LRRC37AA6NMS7 1700 aa23.28■■□□□ 1.32
TFF3-204ENST00000518498 ECE2O60344 883 aa23.28■■□□□ 1.32
TFF3-204ENST00000518498 ZNF853P0CG23 659 aa23.28■■□□□ 1.32
TFF3-204ENST00000518498 RPS12P25398 132 aaKnown RBP23.28■■□□□ 1.32
TFF3-204ENST00000518498 BRPF1P55201 1214 aaPredicted RBP23.28■■□□□ 1.32
TFF3-204ENST00000518498 GOLGA2Q08379 1002 aa23.28■■□□□ 1.32
TFF3-204ENST00000518498 TBC1D10BQ4KMP7 808 aaPredicted RBP23.28■■□□□ 1.32
TFF3-204ENST00000518498 ZBTB38Q8NAP3 1195 aaPredicted RBP23.28■■□□□ 1.32
TFF3-204ENST00000518498 TBC1D16Q8TBP0 767 aa23.28■■□□□ 1.32
TFF3-204ENST00000518498 ZC3H12CQ9C0D7 883 aaKnown RBP23.28■■□□□ 1.32
TFF3-204ENST00000518498 KCNQ5Q9NR82 932 aa23.28■■□□□ 1.32
TFF3-204ENST00000518498 RBM26Q5T8P6 1007 aaKnown RBP23.27■■□□□ 1.32
TFF3-204ENST00000518498 PHAXQ9H814 394 aaKnown RBP23.27■■□□□ 1.32
TFF3-204ENST00000518498 G3V3G9 751 aa23.26■■□□□ 1.31
TFF3-204ENST00000518498 ELL2O00472 640 aaPredicted RBP23.26■■□□□ 1.31
TFF3-204ENST00000518498 HUNKP57058 714 aa23.26■■□□□ 1.31
TFF3-204ENST00000518498 DCAF8Q5TAQ9 597 aa23.26■■□□□ 1.31
TFF3-204ENST00000518498 DCPSQ96C86 337 aaKnown RBP23.26■■□□□ 1.31
TFF3-204ENST00000518498 CCDC85CA6NKD9 419 aa23.25■■□□□ 1.31
TFF3-204ENST00000518498 GNAI1P63096 354 aa23.25■■□□□ 1.31
TFF3-204ENST00000518498 DLK2Q6UY11 383 aa23.25■■□□□ 1.31
TFF3-204ENST00000518498 KRT26Q7Z3Y9 468 aa23.25■■□□□ 1.31
TFF3-204ENST00000518498 MYD88Q99836 296 aa23.25■■□□□ 1.31
TFF3-204ENST00000518498 SEC31BQ9NQW1 1179 aa23.25■■□□□ 1.31
TFF3-204ENST00000518498 IFT57Q9NWB7 429 aa23.25■■□□□ 1.31
TFF3-204ENST00000518498 PODXL2Q9NZ53 605 aa23.25■■□□□ 1.31
TFF3-204ENST00000518498 EGFRP00533 1210 aa23.24■■□□□ 1.31
TFF3-204ENST00000518498 NOGQ13253 232 aa23.24■■□□□ 1.31
TFF3-204ENST00000518498 CCDC191Q8NCU4 936 aa23.24■■□□□ 1.31
TFF3-204ENST00000518498 ANKIB1Q9P2G1 1089 aa23.24■■□□□ 1.31
TFF3-204ENST00000518498 IL16Q14005 1332 aa23.24■■□□□ 1.31
TFF3-204ENST00000518498 VIL1P09327 827 aaKnown RBP23.23■■□□□ 1.31
TFF3-204ENST00000518498 C2orf69Q8N8R5 385 aa23.23■■□□□ 1.31
TFF3-204ENST00000518498 RTL9Q8NET4 1388 aa23.23■■□□□ 1.31
TFF3-204ENST00000518498 PDE8AO60658 829 aa23.22■■□□□ 1.31
TFF3-204ENST00000518498 PCCAP05165 728 aaPredicted RBP23.22■■□□□ 1.31
TFF3-204ENST00000518498 CCDC152Q4G0S7 254 aa23.22■■□□□ 1.31
TFF3-204ENST00000518498 CHMP4AQ9BY43 222 aa23.22■■□□□ 1.31
TFF3-204ENST00000518498 GGA1Q9UJY5 639 aa23.22■■□□□ 1.31
TFF3-204ENST00000518498 COL4A1P02462 1669 aa23.22■■□□□ 1.31
TFF3-204ENST00000518498 E9PSI1 815 aa23.21■■□□□ 1.31
TFF3-204ENST00000518498 UFL1O94874 794 aa23.21■■□□□ 1.31
TFF3-204ENST00000518498 RGMBQ6NW40 437 aa23.21■■□□□ 1.31
TFF3-204ENST00000518498 GBA2Q9HCG7 927 aaPredicted RBP23.21■■□□□ 1.31
TFF3-204ENST00000518498 CWC25Q9NXE8 425 aaPredicted RBP23.21■■□□□ 1.31
TFF3-204ENST00000518498 ADM5C9JUS6 153 aa23.2■■□□□ 1.3
TFF3-204ENST00000518498 DDX58O95786 925 aaKnown RBP23.2■■□□□ 1.3
TFF3-204ENST00000518498 KIF4BQ2VIQ3 1234 aa23.2■■□□□ 1.3
TFF3-204ENST00000518498 C8orf58Q8NAV2 365 aa23.2■■□□□ 1.3
TFF3-204ENST00000518498 JARID2Q92833 1246 aaPredicted RBP23.2■■□□□ 1.3
TFF3-204ENST00000518498 CCDC102AQ96A19 550 aa23.2■■□□□ 1.3
TFF3-204ENST00000518498 ZIC5Q96T25 663 aa23.2■■□□□ 1.3
TFF3-204ENST00000518498 CCDC30Q5VVM6 783 aa23.19■■□□□ 1.3
TFF3-204ENST00000518498 METTL22Q9BUU2 404 aaPredicted RBP23.19■■□□□ 1.3
TFF3-204ENST00000518498 FAM161AQ3B820 660 aa23.18■■□□□ 1.3
TFF3-204ENST00000518498 SULF1Q8IWU6 871 aa23.18■■□□□ 1.3
TFF3-204ENST00000518498 CCDC85AQ96PX6 553 aaPredicted RBP23.18■■□□□ 1.3
TFF3-204ENST00000518498 MYH16Q9H6N6 1097 aa23.18■■□□□ 1.3
TFF3-204ENST00000518498 FAM155AB1AL88 458 aaPredicted RBP23.17■■□□□ 1.3
TFF3-204ENST00000518498 ZNF157P51786 506 aaPredicted RBP23.17■■□□□ 1.3
TFF3-204ENST00000518498 SLFN5Q08AF3 891 aa23.17■■□□□ 1.3
TFF3-204ENST00000518498 ANKRD18AQ8IVF6 992 aa23.17■■□□□ 1.3
TFF3-204ENST00000518498 MCOLN1Q9GZU1 580 aa23.17■■□□□ 1.3
TFF3-204ENST00000518498 RSBN1LQ6PCB5 846 aaPredicted RBP23.16■■□□□ 1.3
TFF3-204ENST00000518498 AGBL3Q8NEM8 1001 aa23.16■■□□□ 1.3
TFF3-204ENST00000518498 ATP2B4P23634 1241 aa23.15■■□□□ 1.3
TFF3-204ENST00000518498 RGS19P49795 217 aa23.15■■□□□ 1.3
TFF3-204ENST00000518498 KIF23Q02241 960 aaPredicted RBP23.15■■□□□ 1.3
TFF3-204ENST00000518498 MLLT1Q03111 559 aaPredicted RBP23.15■■□□□ 1.3
TFF3-204ENST00000518498 DGKZQ13574 1117 aa23.15■■□□□ 1.3
TFF3-204ENST00000518498 GGA3Q9NZ52 723 aa23.15■■□□□ 1.3
TFF3-204ENST00000518498 MAP3K2Q9Y2U5 619 aa23.15■■□□□ 1.3
TFF3-204ENST00000518498 POLR2AP24928 1970 aaKnown RBP23.14■■□□□ 1.3
TFF3-204ENST00000518498 XDHP47989 1333 aa23.14■■□□□ 1.3
TFF3-204ENST00000518498 ZNF280AP59817 542 aaPredicted RBP23.14■■□□□ 1.29
TFF3-204ENST00000518498 SCARF1Q14162 830 aa23.14■■□□□ 1.29
TFF3-204ENST00000518498 ASTN2O75129 1339 aaPredicted RBP23.13■■□□□ 1.29
TFF3-204ENST00000518498 KSR2Q6VAB6 950 aa23.13■■□□□ 1.29
TFF3-204ENST00000518498 PODNQ7Z5L7 613 aa23.13■■□□□ 1.29
TFF3-204ENST00000518498 CDCA5Q96FF9 252 aa23.13■■□□□ 1.29
TFF3-204ENST00000518498 CDCA7LQ96GN5 454 aa23.13■■□□□ 1.29
TFF3-204ENST00000518498 CDC5LQ99459 802 aaKnown RBP23.13■■□□□ 1.29
TFF3-204ENST00000518498 USP17L3A6NCW0 530 aa23.12■■□□□ 1.29
TFF3-204ENST00000518498 USP17L4A6NCW7 530 aa23.12■■□□□ 1.29
TFF3-204ENST00000518498 USP17L8P0C7I0 530 aa23.12■■□□□ 1.29
TFF3-204ENST00000518498 ANGEL2Q5VTE6 544 aaKnown RBP23.12■■□□□ 1.29
TFF3-204ENST00000518498 USP17L1Q7RTZ2 530 aa23.12■■□□□ 1.29
TFF3-204ENST00000518498 TRMT2AQ8IZ69 625 aaKnown RBP23.12■■□□□ 1.29
TFF3-204ENST00000518498 CASP8AP2Q9UKL3 1982 aa23.11■■□□□ 1.29
TFF3-204ENST00000518498 PI4KAP2A4QPH2 592 aa23.11■■□□□ 1.29
TFF3-204ENST00000518498 TSPYL6Q8N831 410 aa23.11■■□□□ 1.29
TFF3-204ENST00000518498 PI4KAP1Q8N8J0 262 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms