RNA–Protein interactions for RNA: ENST00000518224.1

IGHV3-25-201, Transcript of immunoglobulin heavy variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGHV3-25, Length 351 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-25-201ENST00000518224 PNMA8AQ86V59 439 aaPredicted RBP14.38□□□□□ -0.11
IGHV3-25-201ENST00000518224 CCDC85AQ96PX6 553 aaPredicted RBP14.38□□□□□ -0.11
IGHV3-25-201ENST00000518224 EYA3Q99504 573 aa14.38□□□□□ -0.11
IGHV3-25-201ENST00000518224 SRCIN1Q9C0H9 1055 aa14.38□□□□□ -0.11
IGHV3-25-201ENST00000518224 MINPP1Q9UNW1 487 aa14.38□□□□□ -0.11
IGHV3-25-201ENST00000518224 ITGA6P23229 1130 aa14.37□□□□□ -0.11
IGHV3-25-201ENST00000518224 KAZALD1Q96I82 304 aa14.37□□□□□ -0.11
IGHV3-25-201ENST00000518224 GPRC5DQ9NZD1 345 aa14.37□□□□□ -0.11
IGHV3-25-201ENST00000518224 GGA1Q9UJY5 639 aa14.37□□□□□ -0.11
IGHV3-25-201ENST00000518224 PASKQ96RG2 1323 aa14.37□□□□□ -0.11
IGHV3-25-201ENST00000518224 SCN9AQ15858 1988 aa14.36□□□□□ -0.11
IGHV3-25-201ENST00000518224 C6orf229H3BNL8 230 aa14.36□□□□□ -0.11
IGHV3-25-201ENST00000518224 ITGBL1O95965 494 aaPredicted RBP14.36□□□□□ -0.11
IGHV3-25-201ENST00000518224 ATP2B4P23634 1241 aa14.36□□□□□ -0.11
IGHV3-25-201ENST00000518224 EPS15P42566 896 aa14.36□□□□□ -0.11
IGHV3-25-201ENST00000518224 TNIP1Q15025 636 aa14.36□□□□□ -0.11
IGHV3-25-201ENST00000518224 EPHA10Q5JZY3 1008 aa14.36□□□□□ -0.11
IGHV3-25-201ENST00000518224 CIAPIN1Q6FI81 312 aa14.36□□□□□ -0.11
IGHV3-25-201ENST00000518224 GJA3Q9Y6H8 435 aa14.36□□□□□ -0.11
IGHV3-25-201ENST00000518224 MED23Q9ULK4 1368 aa14.35□□□□□ -0.11
IGHV3-25-201ENST00000518224 UFL1O94874 794 aa14.35□□□□□ -0.11
IGHV3-25-201ENST00000518224 RABL6Q3YEC7 729 aaPredicted RBP14.35□□□□□ -0.11
IGHV3-25-201ENST00000518224 USP50Q70EL3 339 aaPredicted RBP14.35□□□□□ -0.11
IGHV3-25-201ENST00000518224 DPF2Q92785 391 aa14.35□□□□□ -0.11
IGHV3-25-201ENST00000518224 ANKIB1Q9P2G1 1089 aa14.35□□□□□ -0.11
IGHV3-25-201ENST00000518224 PGAP2Q9UHJ9 254 aa14.35□□□□□ -0.11
IGHV3-25-201ENST00000518224 PSME4Q14997 1843 aa14.35□□□□□ -0.11
IGHV3-25-201ENST00000518224 SPEF2Q9C093 1822 aa14.34□□□□□ -0.11
IGHV3-25-201ENST00000518224 ECE2O60344 883 aa14.34□□□□□ -0.11
IGHV3-25-201ENST00000518224 RAD17O75943 681 aa14.34□□□□□ -0.11
IGHV3-25-201ENST00000518224 NBPF7P0C2Y1 421 aaPredicted RBP14.34□□□□□ -0.11
IGHV3-25-201ENST00000518224 IGHMBP2P38935 993 aaKnown RBP14.34□□□□□ -0.11
IGHV3-25-201ENST00000518224 GMPSP49915 693 aaPredicted RBP14.34□□□□□ -0.11
IGHV3-25-201ENST00000518224 RARSP54136 660 aaKnown RBP14.34□□□□□ -0.11
IGHV3-25-201ENST00000518224 SLC4A10Q6U841 1118 aa14.34□□□□□ -0.11
IGHV3-25-201ENST00000518224 ZC3H12CQ9C0D7 883 aaKnown RBP14.34□□□□□ -0.11
IGHV3-25-201ENST00000518224 DBNDD1Q9H9R9 158 aa14.34□□□□□ -0.11
IGHV3-25-201ENST00000518224 ADARB2Q9NS39 739 aaKnown RBP14.34□□□□□ -0.11
IGHV3-25-201ENST00000518224 IRS2Q9Y4H2 1338 aa14.34□□□□□ -0.11
IGHV3-25-201ENST00000518224 A0A1B0GUL6 1792 aa14.33□□□□□ -0.12
IGHV3-25-201ENST00000518224 ANKRD18BA2A2Z9 1011 aa14.33□□□□□ -0.12
IGHV3-25-201ENST00000518224 WTIPA6NIX2 430 aaPredicted RBP14.33□□□□□ -0.12
IGHV3-25-201ENST00000518224 VIL1P09327 827 aaKnown RBP14.33□□□□□ -0.12
IGHV3-25-201ENST00000518224 RPS12P25398 132 aaKnown RBP14.33□□□□□ -0.12
IGHV3-25-201ENST00000518224 LMOD1P29536 600 aaPredicted RBP14.33□□□□□ -0.12
IGHV3-25-201ENST00000518224 CCT4P50991 539 aaKnown RBP14.33□□□□□ -0.12
IGHV3-25-201ENST00000518224 LMBR1LQ6UX01 489 aa14.33□□□□□ -0.12
IGHV3-25-201ENST00000518224 C15orf52Q6ZUT6 534 aaKnown RBP14.33□□□□□ -0.12
IGHV3-25-201ENST00000518224 GPR101Q96P66 508 aaPredicted RBP14.33□□□□□ -0.12
IGHV3-25-201ENST00000518224 BCL2L13Q9BXK5 485 aa14.33□□□□□ -0.12
IGHV3-25-201ENST00000518224 ANKRD2Q9GZV1 360 aa14.33□□□□□ -0.12
IGHV3-25-201ENST00000518224 USP44Q9H0E7 712 aa14.33□□□□□ -0.12
IGHV3-25-201ENST00000518224 SMC4Q9NTJ3 1288 aa14.33□□□□□ -0.12
IGHV3-25-201ENST00000518224 C9orf78Q9NZ63 289 aaPredicted RBP14.33□□□□□ -0.12
IGHV3-25-201ENST00000518224 LEMD3Q9Y2U8 911 aa14.33□□□□□ -0.12
IGHV3-25-201ENST00000518224 ZNF646O15015 1829 aaPredicted RBP14.33□□□□□ -0.12
IGHV3-25-201ENST00000518224 PSMD14O00487 310 aa14.32□□□□□ -0.12
IGHV3-25-201ENST00000518224 RIMBP2O15034 1052 aa14.32□□□□□ -0.12
IGHV3-25-201ENST00000518224 IFIT5Q13325 482 aaKnown RBP14.32□□□□□ -0.12
IGHV3-25-201ENST00000518224 PODNQ7Z5L7 613 aa14.32□□□□□ -0.12
IGHV3-25-201ENST00000518224 ARHGAP45Q92619 1136 aa14.32□□□□□ -0.12
IGHV3-25-201ENST00000518224 SUCLG2Q96I99 432 aa14.32□□□□□ -0.12
IGHV3-25-201ENST00000518224 KCNQ5Q9NR82 932 aa14.32□□□□□ -0.12
IGHV3-25-201ENST00000518224 CHRNDQ07001 517 aa14.31□□□□□ -0.12
IGHV3-25-201ENST00000518224 DOK7Q18PE1 504 aa14.31□□□□□ -0.12
IGHV3-25-201ENST00000518224 ANKRD44Q8N8A2 993 aa14.31□□□□□ -0.12
IGHV3-25-201ENST00000518224 ZC3H15Q8WU90 426 aaKnown RBP14.31□□□□□ -0.12
IGHV3-25-201ENST00000518224 GMLQ99445 158 aa14.31□□□□□ -0.12
IGHV3-25-201ENST00000518224 MPHOSPH8Q99549 860 aa14.31□□□□□ -0.12
IGHV3-25-201ENST00000518224 EAPPQ56P03 285 aaPredicted RBP14.3□□□□□ -0.12
IGHV3-25-201ENST00000518224 TXNRD3Q86VQ6 643 aa14.3□□□□□ -0.12
IGHV3-25-201ENST00000518224 CNTROBQ8N137 903 aa14.3□□□□□ -0.12
IGHV3-25-201ENST00000518224 JMYQ8N9B5 988 aa14.3□□□□□ -0.12
IGHV3-25-201ENST00000518224 KLRG1Q96E93 195 aa14.3□□□□□ -0.12
IGHV3-25-201ENST00000518224 CREBZFQ9NS37 354 aa14.3□□□□□ -0.12
IGHV3-25-201ENST00000518224 CNOT7Q9UIV1 285 aaKnown RBP14.3□□□□□ -0.12
IGHV3-25-201ENST00000518224 ZNF804BA4D1E1 1349 aa14.3□□□□□ -0.12
IGHV3-25-201ENST00000518224 HIRAP54198 1017 aaPredicted RBP14.29□□□□□ -0.12
IGHV3-25-201ENST00000518224 HTRA3P83110 453 aa14.29□□□□□ -0.12
IGHV3-25-201ENST00000518224 CCDC57Q2TAC2 916 aa14.29□□□□□ -0.12
IGHV3-25-201ENST00000518224 AGBL3Q8NEM8 1001 aa14.29□□□□□ -0.12
IGHV3-25-201ENST00000518224 API5Q9BZZ5 524 aaKnown RBP14.29□□□□□ -0.12
IGHV3-25-201ENST00000518224 COA1Q9GZY4 146 aa14.29□□□□□ -0.12
IGHV3-25-201ENST00000518224 NOB1Q9ULX3 412 aaKnown RBP14.29□□□□□ -0.12
IGHV3-25-201ENST00000518224 ZBTB12Q9Y330 459 aaPredicted RBP14.29□□□□□ -0.12
IGHV3-25-201ENST00000518224 ZBED9Q6R2W3 1325 aa14.29□□□□□ -0.12
IGHV3-25-201ENST00000518224 KIF16BQ96L93 1317 aa14.29□□□□□ -0.12
IGHV3-25-201ENST00000518224 SHTN1A0MZ66 631 aa14.28□□□□□ -0.12
IGHV3-25-201ENST00000518224 ZNF280AP59817 542 aaPredicted RBP14.28□□□□□ -0.12
IGHV3-25-201ENST00000518224 HNRNPUQ00839 825 aaKnown RBP eCLIP14.28□□□□□ -0.12
IGHV3-25-201ENST00000518224 MAP1SQ66K74 1059 aaPredicted RBP14.28□□□□□ -0.12
IGHV3-25-201ENST00000518224 INTS3Q68E01 1043 aaKnown RBP14.28□□□□□ -0.12
IGHV3-25-201ENST00000518224 MICALL2Q8IY33 904 aa14.28□□□□□ -0.12
IGHV3-25-201ENST00000518224 BICC1Q9H694 974 aaKnown RBP14.28□□□□□ -0.12
IGHV3-25-201ENST00000518224 RIPOR2Q9Y4F9 1068 aa14.28□□□□□ -0.12
IGHV3-25-201ENST00000518224 H7C1D1 291 aa14.27□□□□□ -0.13
IGHV3-25-201ENST00000518224 RSBN1LQ6PCB5 846 aaPredicted RBP14.27□□□□□ -0.13
IGHV3-25-201ENST00000518224 LDHAL6AQ6ZMR3 332 aa14.27□□□□□ -0.13
IGHV3-25-201ENST00000518224 TRPM4Q8TD43 1214 aa14.27□□□□□ -0.13
IGHV3-25-201ENST00000518224 USP17L3A6NCW0 530 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms