RNA–Protein interactions for RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-206ENST00000518074 ERFEQ4G0M1 354 aa13.41□□□□□ -0.26
SPIDR-206ENST00000518074 CCDC93Q567U6 631 aa13.41□□□□□ -0.26
SPIDR-206ENST00000518074 PHAXQ9H814 394 aaKnown RBP13.41□□□□□ -0.26
SPIDR-206ENST00000518074 ABCC12Q96J65 1359 aa13.4□□□□□ -0.26
SPIDR-206ENST00000518074 TAOK3Q9H2K8 898 aa13.4□□□□□ -0.26
SPIDR-206ENST00000518074 CACNA1SQ13698 1873 aa13.4□□□□□ -0.26
SPIDR-206ENST00000518074 CDC45O75419 566 aa13.4□□□□□ -0.26
SPIDR-206ENST00000518074 PRELPP51888 382 aa13.4□□□□□ -0.26
SPIDR-206ENST00000518074 GZF1Q9H116 711 aaPredicted RBP13.4□□□□□ -0.26
SPIDR-206ENST00000518074 CHPF2Q9P2E5 772 aa13.4□□□□□ -0.26
SPIDR-206ENST00000518074 TOMM70O94826 608 aa13.4□□□□□ -0.27
SPIDR-206ENST00000518074 TRIM28Q13263 835 aaKnown RBP13.4□□□□□ -0.27
SPIDR-206ENST00000518074 RBM46Q8TBY0 533 aaKnown RBP13.4□□□□□ -0.27
SPIDR-206ENST00000518074 RBM17Q96I25 401 aaKnown RBP13.4□□□□□ -0.27
SPIDR-206ENST00000518074 GLTPD2A6NH11 291 aa13.39□□□□□ -0.27
SPIDR-206ENST00000518074 CCT4P50991 539 aaKnown RBP13.39□□□□□ -0.27
SPIDR-206ENST00000518074 ZNF526Q8TF50 670 aaPredicted RBP13.39□□□□□ -0.27
SPIDR-206ENST00000518074 BRPF3Q9ULD4 1205 aa13.39□□□□□ -0.27
SPIDR-206ENST00000518074 WDR90Q96KV7 1748 aa13.39□□□□□ -0.27
SPIDR-206ENST00000518074 GNAI2P04899 355 aa13.39□□□□□ -0.27
SPIDR-206ENST00000518074 HMGB1P09429 215 aaKnown RBP13.39□□□□□ -0.27
SPIDR-206ENST00000518074 GPTP24298 496 aa13.39□□□□□ -0.27
SPIDR-206ENST00000518074 FKBP4Q02790 459 aaKnown RBP eCLIP13.39□□□□□ -0.27
SPIDR-206ENST00000518074 ANKRD13DQ6ZTN6 518 aa13.39□□□□□ -0.27
SPIDR-206ENST00000518074 NLRP10Q86W26 655 aa13.39□□□□□ -0.27
SPIDR-206ENST00000518074 HMMRO75330 724 aa13.38□□□□□ -0.27
SPIDR-206ENST00000518074 CD2BP2O95400 341 aaKnown RBP13.38□□□□□ -0.27
SPIDR-206ENST00000518074 TTC22Q5TAA0 569 aa13.38□□□□□ -0.27
SPIDR-206ENST00000518074 RPGRQ92834 1020 aaKnown RBP13.38□□□□□ -0.27
SPIDR-206ENST00000518074 ISCA1Q9BUE6 129 aa13.38□□□□□ -0.27
SPIDR-206ENST00000518074 SNED1Q8TER0 1413 aa13.38□□□□□ -0.27
SPIDR-206ENST00000518074 NLRP3Q96P20 1036 aa13.38□□□□□ -0.27
SPIDR-206ENST00000518074 FAM177BA6PVY3 158 aa13.37□□□□□ -0.27
SPIDR-206ENST00000518074 SDSP20132 328 aa13.37□□□□□ -0.27
SPIDR-206ENST00000518074 FSTL1Q12841 308 aa13.37□□□□□ -0.27
SPIDR-206ENST00000518074 NUTM1Q86Y26 1132 aa13.37□□□□□ -0.27
SPIDR-206ENST00000518074 PSMD1Q99460 953 aa13.37□□□□□ -0.27
SPIDR-206ENST00000518074 LRRFIP2Q9Y608 721 aaKnown RBP13.37□□□□□ -0.27
SPIDR-206ENST00000518074 PNMA6EA0A0J9YXQ4 647 aa13.37□□□□□ -0.27
SPIDR-206ENST00000518074 RBM25P49756 843 aaKnown RBP13.37□□□□□ -0.27
SPIDR-206ENST00000518074 VPS33BQ9H267 617 aa13.37□□□□□ -0.27
SPIDR-206ENST00000518074 AIMP1Q12904 312 aaKnown RBP13.36□□□□□ -0.27
SPIDR-206ENST00000518074 DPY19L2Q6NUT2 758 aa13.36□□□□□ -0.27
SPIDR-206ENST00000518074 TICAM2Q86XR7 235 aa13.36□□□□□ -0.27
SPIDR-206ENST00000518074 NMRK2Q9NPI5 230 aa13.36□□□□□ -0.27
SPIDR-206ENST00000518074 HSPA6P17066 643 aa13.36□□□□□ -0.27
SPIDR-206ENST00000518074 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.36□□□□□ -0.27
SPIDR-206ENST00000518074 SH3TC1Q8TE82 1336 aa13.36□□□□□ -0.27
SPIDR-206ENST00000518074 LAMB2P55268 1798 aa13.36□□□□□ -0.27
SPIDR-206ENST00000518074 KIF2CQ99661 725 aa13.35□□□□□ -0.27
SPIDR-206ENST00000518074 CHMP5Q9NZZ3 219 aa13.35□□□□□ -0.27
SPIDR-206ENST00000518074 TMC4Q7Z404 712 aa13.35□□□□□ -0.27
SPIDR-206ENST00000518074 IL1RAPL2Q9NP60 686 aa13.35□□□□□ -0.27
SPIDR-206ENST00000518074 RNF216Q9NWF9 866 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-206ENST00000518074 BBOX1O75936 387 aa13.35□□□□□ -0.27
SPIDR-206ENST00000518074 VEGFAP15692 232 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-206ENST00000518074 PRDM10Q9NQV6 1147 aa13.35□□□□□ -0.27
SPIDR-206ENST00000518074 RRAGCQ9HB90 399 aa13.34□□□□□ -0.27
SPIDR-206ENST00000518074 ZNF219Q9P2Y4 722 aaPredicted RBP13.34□□□□□ -0.27
SPIDR-206ENST00000518074 CACNA1FO60840 1977 aa13.34□□□□□ -0.27
SPIDR-206ENST00000518074 TRIM6-TRIM34B2RNG4 842 aa13.34□□□□□ -0.27
SPIDR-206ENST00000518074 DDX58O95786 925 aaKnown RBP13.34□□□□□ -0.27
SPIDR-206ENST00000518074 UBTFL1P0CB47 393 aaPredicted RBP13.34□□□□□ -0.27
SPIDR-206ENST00000518074 RILPL2Q969X0 211 aa13.34□□□□□ -0.27
SPIDR-206ENST00000518074 TRMT112Q9UI30 125 aaKnown RBP13.34□□□□□ -0.27
SPIDR-206ENST00000518074 DDX60Q8IY21 1712 aaKnown RBP13.33□□□□□ -0.27
SPIDR-206ENST00000518074 PPEF1O14829 653 aaPredicted RBP13.33□□□□□ -0.28
SPIDR-206ENST00000518074 GNAI3P08754 354 aa13.33□□□□□ -0.28
SPIDR-206ENST00000518074 SYNE4Q8N205 404 aa13.33□□□□□ -0.28
SPIDR-206ENST00000518074 ATP6V0A2Q9Y487 856 aa13.33□□□□□ -0.28
SPIDR-206ENST00000518074 PI4KAP2A4QPH2 592 aa13.32□□□□□ -0.28
SPIDR-206ENST00000518074 SF3B3Q15393 1217 aaKnown RBP13.32□□□□□ -0.28
SPIDR-206ENST00000518074 CASC1Q6TDU7 716 aa13.32□□□□□ -0.28
SPIDR-206ENST00000518074 PI4KAP1Q8N8J0 262 aa13.32□□□□□ -0.28
SPIDR-206ENST00000518074 L3MBTL3Q96JM7 780 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-206ENST00000518074 USP44Q9H0E7 712 aa13.32□□□□□ -0.28
SPIDR-206ENST00000518074 SCN4AP35499 1836 aa13.32□□□□□ -0.28
SPIDR-206ENST00000518074 MCM4P33991 863 aa13.32□□□□□ -0.28
SPIDR-206ENST00000518074 IARSP41252 1262 aaKnown RBP13.32□□□□□ -0.28
SPIDR-206ENST00000518074 APLP1P51693 650 aa13.32□□□□□ -0.28
SPIDR-206ENST00000518074 PDE1AP54750 535 aa13.32□□□□□ -0.28
SPIDR-206ENST00000518074 C3orf67Q6ZVT6 689 aa13.32□□□□□ -0.28
SPIDR-206ENST00000518074 SP8Q8IXZ3 490 aa13.32□□□□□ -0.28
SPIDR-206ENST00000518074 TMX4Q9H1E5 349 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-206ENST00000518074 MAP4K4O95819 1239 aaPredicted RBP13.31□□□□□ -0.28
SPIDR-206ENST00000518074 RIC3Q7Z5B4 369 aa13.31□□□□□ -0.28
SPIDR-206ENST00000518074 CCDC191Q8NCU4 936 aa13.31□□□□□ -0.28
SPIDR-206ENST00000518074 SMC1BQ8NDV3 1235 aa13.31□□□□□ -0.28
SPIDR-206ENST00000518074 SUPT20HQ8NEM7 779 aa13.31□□□□□ -0.28
SPIDR-206ENST00000518074 RTFDC1Q9BY42 306 aaPredicted RBP13.31□□□□□ -0.28
SPIDR-206ENST00000518074 LRRCC1Q9C099 1032 aa13.31□□□□□ -0.28
SPIDR-206ENST00000518074 FZD9O00144 591 aa13.31□□□□□ -0.28
SPIDR-206ENST00000518074 RRP9O43818 475 aaKnown RBP13.31□□□□□ -0.28
SPIDR-206ENST00000518074 SURF6O75683 361 aaKnown RBP13.31□□□□□ -0.28
SPIDR-206ENST00000518074 DDX46Q7L014 1031 aaKnown RBP13.31□□□□□ -0.28
SPIDR-206ENST00000518074 ZBTB38Q8NAP3 1195 aaPredicted RBP13.31□□□□□ -0.28
SPIDR-206ENST00000518074 METTL22Q9BUU2 404 aaPredicted RBP13.31□□□□□ -0.28
SPIDR-206ENST00000518074 SRCIN1Q9C0H9 1055 aa13.31□□□□□ -0.28
SPIDR-206ENST00000518074 NBPF7P0C2Y1 421 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-206ENST00000518074 ATP8B2P98198 1209 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms