RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 ECE2O60344 883 aa11.86□□□□□ -0.51
LINCR-0001-201ENST00000517732 SLC10A3P09131 477 aa11.86□□□□□ -0.51
LINCR-0001-201ENST00000517732 PROSER3Q2NL68 480 aa11.86□□□□□ -0.51
LINCR-0001-201ENST00000517732 GGA3Q9NZ52 723 aa11.86□□□□□ -0.51
LINCR-0001-201ENST00000517732 PRPF38BQ5VTL8 546 aaKnown RBP11.85□□□□□ -0.51
LINCR-0001-201ENST00000517732 NECTIN2Q92692 538 aa11.85□□□□□ -0.51
LINCR-0001-201ENST00000517732 SLC4A2P04920 1241 aa11.84□□□□□ -0.51
LINCR-0001-201ENST00000517732 RIPK4P57078 832 aa11.84□□□□□ -0.51
LINCR-0001-201ENST00000517732 DOK7Q18PE1 504 aa11.84□□□□□ -0.51
LINCR-0001-201ENST00000517732 DLK2Q6UY11 383 aa11.84□□□□□ -0.51
LINCR-0001-201ENST00000517732 CELF1Q92879 486 aaKnown RBP11.84□□□□□ -0.51
LINCR-0001-201ENST00000517732 CDCA5Q96FF9 252 aa11.84□□□□□ -0.51
LINCR-0001-201ENST00000517732 ZC3H12CQ9C0D7 883 aaKnown RBP11.84□□□□□ -0.51
LINCR-0001-201ENST00000517732 HDAC9Q9UKV0 1011 aa11.84□□□□□ -0.51
LINCR-0001-201ENST00000517732 EGFRP00533 1210 aa11.83□□□□□ -0.52
LINCR-0001-201ENST00000517732 HSP90B1P14625 803 aaKnown RBP11.83□□□□□ -0.52
LINCR-0001-201ENST00000517732 FKBP1BP68106 108 aa11.83□□□□□ -0.52
LINCR-0001-201ENST00000517732 GPSM2P81274 684 aa11.83□□□□□ -0.52
LINCR-0001-201ENST00000517732 SF3B3Q15393 1217 aaKnown RBP11.83□□□□□ -0.52
LINCR-0001-201ENST00000517732 PKN2Q16513 984 aaKnown RBP11.83□□□□□ -0.52
LINCR-0001-201ENST00000517732 PLBD2Q8NHP8 589 aa11.83□□□□□ -0.52
LINCR-0001-201ENST00000517732 CSRNP1Q96S65 589 aa11.83□□□□□ -0.52
LINCR-0001-201ENST00000517732 POLLQ9UGP5 575 aa11.83□□□□□ -0.52
LINCR-0001-201ENST00000517732 RTL9Q8NET4 1388 aa11.82□□□□□ -0.52
LINCR-0001-201ENST00000517732 RASAL3Q86YV0 1011 aa11.82□□□□□ -0.52
LINCR-0001-201ENST00000517732 TBC1D16Q8TBP0 767 aa11.82□□□□□ -0.52
LINCR-0001-201ENST00000517732 FAM89AQ96GI7 184 aa11.82□□□□□ -0.52
LINCR-0001-201ENST00000517732 ANKIB1Q9P2G1 1089 aa11.82□□□□□ -0.52
LINCR-0001-201ENST00000517732 UFL1O94874 794 aa11.81□□□□□ -0.52
LINCR-0001-201ENST00000517732 VIL1P09327 827 aaKnown RBP11.81□□□□□ -0.52
LINCR-0001-201ENST00000517732 RPS8P62241 208 aaKnown RBP11.81□□□□□ -0.52
LINCR-0001-201ENST00000517732 HDGFL1Q5TGJ6 251 aa11.81□□□□□ -0.52
LINCR-0001-201ENST00000517732 ANGEL2Q5VTE6 544 aaKnown RBP11.81□□□□□ -0.52
LINCR-0001-201ENST00000517732 ANKRD13DQ6ZTN6 518 aa11.81□□□□□ -0.52
LINCR-0001-201ENST00000517732 AGBL3Q8NEM8 1001 aa11.81□□□□□ -0.52
LINCR-0001-201ENST00000517732 ZNF428Q96B54 188 aa11.81□□□□□ -0.52
LINCR-0001-201ENST00000517732 CHPF2Q9P2E5 772 aa11.81□□□□□ -0.52
LINCR-0001-201ENST00000517732 HPS5Q9UPZ3 1129 aa11.81□□□□□ -0.52
LINCR-0001-201ENST00000517732 MYH3P11055 1940 aa11.81□□□□□ -0.52
LINCR-0001-201ENST00000517732 SPEF2Q9C093 1822 aa11.81□□□□□ -0.52
LINCR-0001-201ENST00000517732 ZNF609O15014 1411 aa11.8□□□□□ -0.52
LINCR-0001-201ENST00000517732 IRS4O14654 1257 aaPredicted RBP11.8□□□□□ -0.52
LINCR-0001-201ENST00000517732 SCARF1Q14162 830 aa11.8□□□□□ -0.52
LINCR-0001-201ENST00000517732 RTL5Q5HYW3 569 aaPredicted RBP11.8□□□□□ -0.52
LINCR-0001-201ENST00000517732 ISCA1Q9BUE6 129 aa11.8□□□□□ -0.52
LINCR-0001-201ENST00000517732 KCNQ5Q9NR82 932 aa11.8□□□□□ -0.52
LINCR-0001-201ENST00000517732 PODXL2Q9NZ53 605 aa11.8□□□□□ -0.52
LINCR-0001-201ENST00000517732 DBF4Q9UBU7 674 aaPredicted RBP11.8□□□□□ -0.52
LINCR-0001-201ENST00000517732 GGA1Q9UJY5 639 aa11.8□□□□□ -0.52
LINCR-0001-201ENST00000517732 PITPNM2Q9BZ72 1349 aa11.8□□□□□ -0.52
LINCR-0001-201ENST00000517732 ATP5J2-PTCD1G3V325 749 aa11.79□□□□□ -0.52
LINCR-0001-201ENST00000517732 TNRC18O15417 2968 aaPredicted RBP11.79□□□□□ -0.52
LINCR-0001-201ENST00000517732 HOXB7P09629 217 aa11.79□□□□□ -0.52
LINCR-0001-201ENST00000517732 NF2P35240 595 aa11.79□□□□□ -0.52
LINCR-0001-201ENST00000517732 TMPOP42166 694 aaKnown RBP11.79□□□□□ -0.52
LINCR-0001-201ENST00000517732 TTLL12Q14166 644 aaPredicted RBP11.79□□□□□ -0.52
LINCR-0001-201ENST00000517732 RSBN1LQ6PCB5 846 aaPredicted RBP11.79□□□□□ -0.52
LINCR-0001-201ENST00000517732 GCC1Q96CN9 775 aa11.79□□□□□ -0.52
LINCR-0001-201ENST00000517732 LAS1LQ9Y4W2 734 aaKnown RBP11.79□□□□□ -0.52
LINCR-0001-201ENST00000517732 COL4A1P02462 1669 aa11.78□□□□□ -0.52
LINCR-0001-201ENST00000517732 USP17L8P0C7I0 530 aa11.78□□□□□ -0.52
LINCR-0001-201ENST00000517732 ZNF280AP59817 542 aaPredicted RBP11.78□□□□□ -0.52
LINCR-0001-201ENST00000517732 CCDC152Q4G0S7 254 aa11.78□□□□□ -0.52
LINCR-0001-201ENST00000517732 ZNF296Q8WUU4 475 aaPredicted RBP11.78□□□□□ -0.52
LINCR-0001-201ENST00000517732 MYOZ2Q9NPC6 264 aa11.78□□□□□ -0.52
LINCR-0001-201ENST00000517732 HYPKQ9NX55 129 aa11.78□□□□□ -0.52
LINCR-0001-201ENST00000517732 ASTN2O75129 1339 aaPredicted RBP11.78□□□□□ -0.52
LINCR-0001-201ENST00000517732 GOLGA2Q08379 1002 aa11.77□□□□□ -0.53
LINCR-0001-201ENST00000517732 SREBF2Q12772 1141 aa11.77□□□□□ -0.53
LINCR-0001-201ENST00000517732 NEUROD2Q15784 382 aa11.77□□□□□ -0.53
LINCR-0001-201ENST00000517732 RIC3Q7Z5B4 369 aa11.77□□□□□ -0.53
LINCR-0001-201ENST00000517732 XDHP47989 1333 aa11.77□□□□□ -0.53
LINCR-0001-201ENST00000517732 USP17L3A6NCW0 530 aa11.76□□□□□ -0.53
LINCR-0001-201ENST00000517732 USP17L4A6NCW7 530 aa11.76□□□□□ -0.53
LINCR-0001-201ENST00000517732 CHL1O00533 1208 aa11.76□□□□□ -0.53
LINCR-0001-201ENST00000517732 TBC1D8O95759 1140 aa11.76□□□□□ -0.53
LINCR-0001-201ENST00000517732 TRIM28Q13263 835 aaKnown RBP11.76□□□□□ -0.53
LINCR-0001-201ENST00000517732 KRT24Q2M2I5 525 aa11.76□□□□□ -0.53
LINCR-0001-201ENST00000517732 NOM1Q5C9Z4 860 aaKnown RBP11.76□□□□□ -0.53
LINCR-0001-201ENST00000517732 FBXO46Q6PJ61 603 aaPredicted RBP11.76□□□□□ -0.53
LINCR-0001-201ENST00000517732 USP17L1Q7RTZ2 530 aa11.76□□□□□ -0.53
LINCR-0001-201ENST00000517732 PODNQ7Z5L7 613 aa11.76□□□□□ -0.53
LINCR-0001-201ENST00000517732 OGFOD1Q8N543 542 aa11.76□□□□□ -0.53
LINCR-0001-201ENST00000517732 ZBTB38Q8NAP3 1195 aaPredicted RBP11.76□□□□□ -0.53
LINCR-0001-201ENST00000517732 ECM29Q5VYK3 1845 aa11.76□□□□□ -0.53
LINCR-0001-201ENST00000517732 UBE2Q2LH0YL09 131 aa11.75□□□□□ -0.53
LINCR-0001-201ENST00000517732 GPR25O00155 361 aa11.75□□□□□ -0.53
LINCR-0001-201ENST00000517732 PDE8AO60658 829 aa11.75□□□□□ -0.53
LINCR-0001-201ENST00000517732 ATP2B4P23634 1241 aa11.75□□□□□ -0.53
LINCR-0001-201ENST00000517732 ARMC9Q7Z3E5 817 aa11.75□□□□□ -0.53
LINCR-0001-201ENST00000517732 ANKRD18AQ8IVF6 992 aa11.75□□□□□ -0.53
LINCR-0001-201ENST00000517732 SEC31BQ9NQW1 1179 aa11.75□□□□□ -0.53
LINCR-0001-201ENST00000517732 MYO3BQ8WXR4 1341 aa11.75□□□□□ -0.53
LINCR-0001-201ENST00000517732 RBBP6Q7Z6E9 1792 aaKnown RBP11.74□□□□□ -0.53
LINCR-0001-201ENST00000517732 ZNF646O15015 1829 aaPredicted RBP11.74□□□□□ -0.53
LINCR-0001-201ENST00000517732 FKTNO75072 461 aa11.74□□□□□ -0.53
LINCR-0001-201ENST00000517732 TM4SF4P48230 202 aa11.74□□□□□ -0.53
LINCR-0001-201ENST00000517732 MOB2Q70IA6 237 aa11.74□□□□□ -0.53
LINCR-0001-201ENST00000517732 FBXW7Q969H0 707 aa11.74□□□□□ -0.53
LINCR-0001-201ENST00000517732 ALDH1A1P00352 501 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms