RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 ADGRB2O60241 1585 aa3.71□□□□□ -1.82
SKP1-204ENST00000517691 QRICH2Q9H0J4 1663 aa3.71□□□□□ -1.82
SKP1-204ENST00000517691 FMN2Q9NZ56 1722 aa3.71□□□□□ -1.82
SKP1-204ENST00000517691 SOBPA7XYQ1 873 aa3.71□□□□□ -1.82
SKP1-204ENST00000517691 ZC3H6P61129 1189 aaKnown RBP3.71□□□□□ -1.82
SKP1-204ENST00000517691 PTCRAQ6ISU1 281 aaPredicted RBP3.71□□□□□ -1.82
SKP1-204ENST00000517691 FAM174AQ8TBP5 190 aa3.71□□□□□ -1.82
SKP1-204ENST00000517691 ZNF526Q8TF50 670 aaPredicted RBP3.71□□□□□ -1.82
SKP1-204ENST00000517691 PSMD1Q99460 953 aa3.71□□□□□ -1.82
SKP1-204ENST00000517691 TTC21BQ7Z4L5 1316 aa3.71□□□□□ -1.82
SKP1-204ENST00000517691 PXDNQ92626 1479 aa3.71□□□□□ -1.82
SKP1-204ENST00000517691 AHDC1Q5TGY3 1603 aaPredicted RBP3.71□□□□□ -1.82
SKP1-204ENST00000517691 FMNL1O95466 1100 aaPredicted RBP3.7□□□□□ -1.82
SKP1-204ENST00000517691 JUNDP17535 347 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 SRSF11Q05519 484 aaKnown RBP3.7□□□□□ -1.82
SKP1-204ENST00000517691 CNGB1Q14028 1251 aaPredicted RBP3.7□□□□□ -1.82
SKP1-204ENST00000517691 PTPRNQ16849 979 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 FOXD4L6Q3SYB3 417 aaPredicted RBP3.7□□□□□ -1.82
SKP1-204ENST00000517691 FOXD4L3Q6VB84 417 aaPredicted RBP3.7□□□□□ -1.82
SKP1-204ENST00000517691 NME9Q86XW9 330 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 NFATC2IPQ8NCF5 419 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 DRC1Q96MC2 740 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 PANK3Q9H999 370 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 ZMIZ1Q9ULJ6 1067 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.7□□□□□ -1.82
SKP1-204ENST00000517691 WASF2Q9Y6W5 498 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 TNS3Q68CZ2 1445 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 FAM83GA6ND36 823 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 GCP02774 474 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 WNT7BP56706 349 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 EVA1CP58658 441 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 ELOAQ14241 798 aaKnown RBP3.7□□□□□ -1.82
SKP1-204ENST00000517691 CHRNA2Q15822 529 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 RC3H1Q5TC82 1133 aaKnown RBP3.7□□□□□ -1.82
SKP1-204ENST00000517691 PHTF2Q8N3S3 785 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 COG3Q96JB2 828 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 QTRT2Q9H974 415 aaKnown RBP3.7□□□□□ -1.82
SKP1-204ENST00000517691 PRDM11Q9NQV5 511 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 EVA1BQ9NVM1 165 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 CEP126Q9P2H0 1117 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 PPP1R1BQ9UD71 204 aaPredicted RBP3.7□□□□□ -1.82
SKP1-204ENST00000517691 USP21Q9UK80 565 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 AFF2P51816 1311 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 KIF7Q2M1P5 1343 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 TTC21AQ8NDW8 1320 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 NINLQ9Y2I6 1382 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 USP6P35125 1406 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 USP32Q8NFA0 1604 aa3.7□□□□□ -1.82
SKP1-204ENST00000517691 KIF1AQ12756 1690 aa3.69□□□□□ -1.82
SKP1-204ENST00000517691 COL16A1Q07092 1604 aaPredicted RBP3.69□□□□□ -1.82
SKP1-204ENST00000517691 CPSF1Q10570 1443 aaKnown RBP3.69□□□□□ -1.82
SKP1-204ENST00000517691 A0A1W2PP64 1363 aa3.69□□□□□ -1.82
SKP1-204ENST00000517691 BRD4O60885 1362 aaPredicted RBP3.69□□□□□ -1.82
SKP1-204ENST00000517691 ANKRD36BQ8N2N9 1353 aa3.69□□□□□ -1.82
SKP1-204ENST00000517691 ZC3H4Q9UPT8 1303 aaKnown RBP3.69□□□□□ -1.82
SKP1-204ENST00000517691 USP17L3A6NCW0 530 aa3.69□□□□□ -1.82
SKP1-204ENST00000517691 USP17L4A6NCW7 530 aa3.69□□□□□ -1.82
SKP1-204ENST00000517691 DXOO77932 396 aaKnown RBP3.69□□□□□ -1.82
SKP1-204ENST00000517691 TMEM164Q5U3C3 297 aa3.69□□□□□ -1.82
SKP1-204ENST00000517691 ZNF772Q68DY9 489 aaPredicted RBP3.69□□□□□ -1.82
SKP1-204ENST00000517691 PHLDB3Q6NSJ2 640 aa3.69□□□□□ -1.82
SKP1-204ENST00000517691 USP17L2Q6R6M4 530 aa3.69□□□□□ -1.82
SKP1-204ENST00000517691 USP17L1Q7RTZ2 530 aa3.69□□□□□ -1.82
SKP1-204ENST00000517691 TICAM2Q86XR7 235 aa3.69□□□□□ -1.82
SKP1-204ENST00000517691 PLEKHM2Q8IWE5 1019 aa3.69□□□□□ -1.82
SKP1-204ENST00000517691 STK32AQ8WU08 396 aa3.69□□□□□ -1.82
SKP1-204ENST00000517691 PURBQ96QR8 312 aaKnown RBP3.69□□□□□ -1.82
SKP1-204ENST00000517691 CARD14Q9BXL6 1004 aa3.69□□□□□ -1.82
SKP1-204ENST00000517691 GGNBP2Q9H3C7 697 aa3.69□□□□□ -1.82
SKP1-204ENST00000517691 KNSTRNQ9Y448 316 aa3.69□□□□□ -1.82
SKP1-204ENST00000517691 WASHC2AQ641Q2 1341 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 FYB1O15117 783 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 SKIP12755 728 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 CANXP27824 592 aaKnown RBP3.68□□□□□ -1.82
SKP1-204ENST00000517691 TNNT2P45379 298 aaPredicted RBP3.68□□□□□ -1.82
SKP1-204ENST00000517691 MMP16P51512 607 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 LRP8Q14114 963 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 TSGA10IPQ3SY00 556 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 MSS51Q4VC12 460 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 LCE5AQ5TCM9 118 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 CC2D2BQ6DHV5 1058 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 ZNF662Q6ZS27 426 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 ANKRD13AQ8IZ07 590 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 DEPDC4Q8N2C3 294 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 KCNH5Q8NCM2 988 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 PRDM16Q9HAZ2 1276 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 STRN4Q9NRL3 753 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 BTG4Q9NY30 223 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 RGS17Q9UGC6 210 aaPredicted RBP3.68□□□□□ -1.82
SKP1-204ENST00000517691 LRP6O75581 1613 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 NHSL1Q5SYE7 1610 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 EDC4Q6P2E9 1401 aaKnown RBP3.68□□□□□ -1.82
SKP1-204ENST00000517691 NSD3Q9BZ95 1437 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 KIAA0232Q92628 1395 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 CGNL1Q0VF96 1302 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 USP17L5A8MUK1 530 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 CCNYL3P0C7X3 344 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 FBLN1P23142 703 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 RXRBP28702 533 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 CTHP32929 405 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms