RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 EYA3Q99504 573 aa17.86■□□□□ 0.45
PDGFRB-202ENST00000517488 DBNDD1Q9H9R9 158 aa17.86■□□□□ 0.45
PDGFRB-202ENST00000517488 C9orf78Q9NZ63 289 aaPredicted RBP17.86■□□□□ 0.45
PDGFRB-202ENST00000517488 MINPP1Q9UNW1 487 aa17.86■□□□□ 0.45
PDGFRB-202ENST00000517488 LRRC37AA6NMS7 1700 aa17.86■□□□□ 0.45
PDGFRB-202ENST00000517488 WTIPA6NIX2 430 aaPredicted RBP17.85■□□□□ 0.45
PDGFRB-202ENST00000517488 CT47B1P0C2W7 299 aaPredicted RBP17.85■□□□□ 0.45
PDGFRB-202ENST00000517488 EPS15P42566 896 aa17.85■□□□□ 0.45
PDGFRB-202ENST00000517488 APLP1P51693 650 aa17.85■□□□□ 0.45
PDGFRB-202ENST00000517488 HNRNPUQ00839 825 aaKnown RBP eCLIP17.85■□□□□ 0.45
PDGFRB-202ENST00000517488 DOK7Q18PE1 504 aa17.85■□□□□ 0.45
PDGFRB-202ENST00000517488 EAPPQ56P03 285 aaPredicted RBP17.85■□□□□ 0.45
PDGFRB-202ENST00000517488 CIAPIN1Q6FI81 312 aa17.85■□□□□ 0.45
PDGFRB-202ENST00000517488 CHADLQ6NUI6 762 aa17.85■□□□□ 0.45
PDGFRB-202ENST00000517488 XDHP47989 1333 aa17.84■□□□□ 0.45
PDGFRB-202ENST00000517488 IGHMBP2P38935 993 aaKnown RBP17.84■□□□□ 0.45
PDGFRB-202ENST00000517488 HTRA3P83110 453 aa17.84■□□□□ 0.45
PDGFRB-202ENST00000517488 LMBR1LQ6UX01 489 aa17.84■□□□□ 0.45
PDGFRB-202ENST00000517488 LDHDQ86WU2 507 aa17.84■□□□□ 0.45
PDGFRB-202ENST00000517488 ZC3H12CQ9C0D7 883 aaKnown RBP17.84■□□□□ 0.45
PDGFRB-202ENST00000517488 CHMP3Q9Y3E7 222 aa17.84■□□□□ 0.45
PDGFRB-202ENST00000517488 NBPF7P0C2Y1 421 aaPredicted RBP17.83■□□□□ 0.44
PDGFRB-202ENST00000517488 ATP2B4P23634 1241 aa17.83■□□□□ 0.44
PDGFRB-202ENST00000517488 LMOD1P29536 600 aaPredicted RBP17.83■□□□□ 0.44
PDGFRB-202ENST00000517488 GMPSP49915 693 aaPredicted RBP17.83■□□□□ 0.44
PDGFRB-202ENST00000517488 KCNQ5Q9NR82 932 aa17.83■□□□□ 0.44
PDGFRB-202ENST00000517488 ANKRD18BA2A2Z9 1011 aa17.82■□□□□ 0.44
PDGFRB-202ENST00000517488 ECE2O60344 883 aa17.82■□□□□ 0.44
PDGFRB-202ENST00000517488 RARSP54136 660 aaKnown RBP17.82■□□□□ 0.44
PDGFRB-202ENST00000517488 IFIT5Q13325 482 aaKnown RBP17.82■□□□□ 0.44
PDGFRB-202ENST00000517488 TNIP1Q15025 636 aa17.82■□□□□ 0.44
PDGFRB-202ENST00000517488 PNMA8AQ86V59 439 aaPredicted RBP17.82■□□□□ 0.44
PDGFRB-202ENST00000517488 KAZALD1Q96I82 304 aa17.82■□□□□ 0.44
PDGFRB-202ENST00000517488 SUCLG2Q96I99 432 aa17.82■□□□□ 0.44
PDGFRB-202ENST00000517488 GPRC5DQ9NZD1 345 aa17.82■□□□□ 0.44
PDGFRB-202ENST00000517488 NOB1Q9ULX3 412 aaKnown RBP17.82■□□□□ 0.44
PDGFRB-202ENST00000517488 LTBP1Q14766 1721 aa17.81■□□□□ 0.44
PDGFRB-202ENST00000517488 UTYO14607 1347 aa17.81■□□□□ 0.44
PDGFRB-202ENST00000517488 MPHOSPH8Q99549 860 aa17.81■□□□□ 0.44
PDGFRB-202ENST00000517488 CLEC11AQ9Y240 323 aa17.81■□□□□ 0.44
PDGFRB-202ENST00000517488 PSMD14O00487 310 aa17.8■□□□□ 0.44
PDGFRB-202ENST00000517488 CCT4P50991 539 aaKnown RBP17.8■□□□□ 0.44
PDGFRB-202ENST00000517488 BRPF1P55201 1214 aaPredicted RBP17.8■□□□□ 0.44
PDGFRB-202ENST00000517488 ZBTB12Q9Y330 459 aaPredicted RBP17.8■□□□□ 0.44
PDGFRB-202ENST00000517488 SHTN1A0MZ66 631 aa17.79■□□□□ 0.44
PDGFRB-202ENST00000517488 DNAJC5GQ8N7S2 189 aa17.79■□□□□ 0.44
PDGFRB-202ENST00000517488 ZNF594Q96JF6 807 aaPredicted RBP17.79■□□□□ 0.44
PDGFRB-202ENST00000517488 USP44Q9H0E7 712 aa17.79■□□□□ 0.44
PDGFRB-202ENST00000517488 SCN4AP35499 1836 aa17.79■□□□□ 0.44
PDGFRB-202ENST00000517488 G3V3G9 751 aa17.78■□□□□ 0.44
PDGFRB-202ENST00000517488 ITGBL1O95965 494 aaPredicted RBP17.78■□□□□ 0.44
PDGFRB-202ENST00000517488 CHRNDQ07001 517 aa17.78■□□□□ 0.44
PDGFRB-202ENST00000517488 CCDC57Q2TAC2 916 aa17.78■□□□□ 0.44
PDGFRB-202ENST00000517488 DCAF8Q5TAQ9 597 aa17.78■□□□□ 0.44
PDGFRB-202ENST00000517488 MAP1SQ66K74 1059 aaPredicted RBP17.78■□□□□ 0.44
PDGFRB-202ENST00000517488 ANKRD2Q9GZV1 360 aa17.78■□□□□ 0.44
PDGFRB-202ENST00000517488 BICC1Q9H694 974 aaKnown RBP17.78■□□□□ 0.44
PDGFRB-202ENST00000517488 ADARB2Q9NS39 739 aaKnown RBP17.78■□□□□ 0.44
PDGFRB-202ENST00000517488 SNAP23O00161 211 aa17.77■□□□□ 0.44
PDGFRB-202ENST00000517488 USP50Q70EL3 339 aaPredicted RBP17.77■□□□□ 0.44
PDGFRB-202ENST00000517488 TXNRD3Q86VQ6 643 aa17.77■□□□□ 0.44
PDGFRB-202ENST00000517488 ANKRD44Q8N8A2 993 aa17.77■□□□□ 0.44
PDGFRB-202ENST00000517488 HELBQ8NG08 1087 aaPredicted RBP17.77■□□□□ 0.44
PDGFRB-202ENST00000517488 CNOT7Q9UIV1 285 aaKnown RBP17.77■□□□□ 0.44
PDGFRB-202ENST00000517488 LEMD3Q9Y2U8 911 aa17.77■□□□□ 0.44
PDGFRB-202ENST00000517488 ZNF804BA4D1E1 1349 aa17.76■□□□□ 0.43
PDGFRB-202ENST00000517488 VIL1P09327 827 aaKnown RBP17.76■□□□□ 0.43
PDGFRB-202ENST00000517488 KLRK1P26718 216 aa17.76■□□□□ 0.43
PDGFRB-202ENST00000517488 RABL6Q3YEC7 729 aaPredicted RBP17.76■□□□□ 0.43
PDGFRB-202ENST00000517488 TAF7LQ5H9L4 462 aa17.76■□□□□ 0.43
PDGFRB-202ENST00000517488 MICALL2Q8IY33 904 aa17.76■□□□□ 0.43
PDGFRB-202ENST00000517488 CNTROBQ8N137 903 aa17.76■□□□□ 0.43
PDGFRB-202ENST00000517488 API5Q9BZZ5 524 aaKnown RBP17.76■□□□□ 0.43
PDGFRB-202ENST00000517488 MYH3P11055 1940 aa17.76■□□□□ 0.43
PDGFRB-202ENST00000517488 MED23Q9ULK4 1368 aa17.76■□□□□ 0.43
PDGFRB-202ENST00000517488 PASKQ96RG2 1323 aa17.75■□□□□ 0.43
PDGFRB-202ENST00000517488 TAF5LO75529 589 aa17.75■□□□□ 0.43
PDGFRB-202ENST00000517488 BCAR3O75815 825 aa17.75■□□□□ 0.43
PDGFRB-202ENST00000517488 HIRAP54198 1017 aaPredicted RBP17.75■□□□□ 0.43
PDGFRB-202ENST00000517488 LDHAL6AQ6ZMR3 332 aa17.75■□□□□ 0.43
PDGFRB-202ENST00000517488 TRPM4Q8TD43 1214 aa17.75■□□□□ 0.43
PDGFRB-202ENST00000517488 DPF2Q92785 391 aa17.75■□□□□ 0.43
PDGFRB-202ENST00000517488 KCNJ4P48050 445 aa17.74■□□□□ 0.43
PDGFRB-202ENST00000517488 PODNQ7Z5L7 613 aa17.74■□□□□ 0.43
PDGFRB-202ENST00000517488 H7C1D1 291 aa17.73■□□□□ 0.43
PDGFRB-202ENST00000517488 RPS12P25398 132 aaKnown RBP17.73■□□□□ 0.43
PDGFRB-202ENST00000517488 SAMD7Q7Z3H4 446 aa17.73■□□□□ 0.43
PDGFRB-202ENST00000517488 PUS3Q9BZE2 481 aaKnown RBP17.73■□□□□ 0.43
PDGFRB-202ENST00000517488 CNNM1Q9NRU3 951 aa17.73■□□□□ 0.43
PDGFRB-202ENST00000517488 ADAMTSL1Q8N6G6 1762 aa17.73■□□□□ 0.43
PDGFRB-202ENST00000517488 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
PDGFRB-202ENST00000517488 KIF16BQ96L93 1317 aa17.72■□□□□ 0.43
PDGFRB-202ENST00000517488 USP17L3A6NCW0 530 aa17.72■□□□□ 0.43
PDGFRB-202ENST00000517488 USP17L4A6NCW7 530 aa17.72■□□□□ 0.43
PDGFRB-202ENST00000517488 PLIN1O60240 522 aa17.72■□□□□ 0.43
PDGFRB-202ENST00000517488 EGFRP00533 1210 aa17.72■□□□□ 0.43
PDGFRB-202ENST00000517488 RSBN1LQ6PCB5 846 aaPredicted RBP17.72■□□□□ 0.43
PDGFRB-202ENST00000517488 USP17L1Q7RTZ2 530 aa17.72■□□□□ 0.43
PDGFRB-202ENST00000517488 ARHGAP45Q92619 1136 aa17.72■□□□□ 0.43
PDGFRB-202ENST00000517488 COA1Q9GZY4 146 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms