RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 FANCIQ9NVI1 1328 aa11.22□□□□□ -0.61
PABPC1-202ENST00000517403 MAP3K2Q9Y2U5 619 aa11.22□□□□□ -0.61
PABPC1-202ENST00000517403 RASSF10A6NK89 507 aa11.21□□□□□ -0.61
PABPC1-202ENST00000517403 TMEM88BA6NKF7 163 aa11.21□□□□□ -0.61
PABPC1-202ENST00000517403 PSMD14O00487 310 aa11.21□□□□□ -0.61
PABPC1-202ENST00000517403 BBOX1O75936 387 aa11.21□□□□□ -0.61
PABPC1-202ENST00000517403 KLRK1P26718 216 aa11.21□□□□□ -0.61
PABPC1-202ENST00000517403 DSG3P32926 999 aa11.21□□□□□ -0.61
PABPC1-202ENST00000517403 CASP7P55210 303 aa11.21□□□□□ -0.61
PABPC1-202ENST00000517403 GNAI1P63096 354 aa11.21□□□□□ -0.61
PABPC1-202ENST00000517403 DOK7Q18PE1 504 aa11.21□□□□□ -0.61
PABPC1-202ENST00000517403 DDX46Q7L014 1031 aaKnown RBP11.21□□□□□ -0.61
PABPC1-202ENST00000517403 TBC1D16Q8TBP0 767 aa11.21□□□□□ -0.61
PABPC1-202ENST00000517403 METTL22Q9BUU2 404 aaPredicted RBP11.21□□□□□ -0.61
PABPC1-202ENST00000517403 CLEC11AQ9Y240 323 aa11.21□□□□□ -0.61
PABPC1-202ENST00000517403 PI4KAP2A4QPH2 592 aa11.2□□□□□ -0.62
PABPC1-202ENST00000517403 RIMBP2O15034 1052 aa11.2□□□□□ -0.62
PABPC1-202ENST00000517403 PCCAP05165 728 aaPredicted RBP11.2□□□□□ -0.62
PABPC1-202ENST00000517403 SAMD7Q7Z3H4 446 aa11.2□□□□□ -0.62
PABPC1-202ENST00000517403 RIC3Q7Z5B4 369 aa11.2□□□□□ -0.62
PABPC1-202ENST00000517403 PI4KAP1Q8N8J0 262 aa11.2□□□□□ -0.62
PABPC1-202ENST00000517403 ZBTB38Q8NAP3 1195 aaPredicted RBP11.2□□□□□ -0.62
PABPC1-202ENST00000517403 ZIC5Q96T25 663 aa11.2□□□□□ -0.62
PABPC1-202ENST00000517403 TULP1O00294 542 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-202ENST00000517403 ECE2O60344 883 aa11.19□□□□□ -0.62
PABPC1-202ENST00000517403 GOLGA2Q08379 1002 aa11.19□□□□□ -0.62
PABPC1-202ENST00000517403 CCDC27Q2M243 656 aa11.19□□□□□ -0.62
PABPC1-202ENST00000517403 CIAPIN1Q6FI81 312 aa11.19□□□□□ -0.62
PABPC1-202ENST00000517403 CYP4F22Q6NT55 531 aa11.19□□□□□ -0.62
PABPC1-202ENST00000517403 PNMA8AQ86V59 439 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-202ENST00000517403 MICALL2Q8IY33 904 aa11.19□□□□□ -0.62
PABPC1-202ENST00000517403 GREM2Q9H772 168 aa11.19□□□□□ -0.62
PABPC1-202ENST00000517403 NSFL1CQ9UNZ2 370 aaKnown RBP11.19□□□□□ -0.62
PABPC1-202ENST00000517403 SALL2Q9Y467 1007 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-202ENST00000517403 CDHR2Q9BYE9 1310 aa11.18□□□□□ -0.62
PABPC1-202ENST00000517403 IRS2Q9Y4H2 1338 aa11.18□□□□□ -0.62
PABPC1-202ENST00000517403 NEURL1BA8MQ27 555 aa11.18□□□□□ -0.62
PABPC1-202ENST00000517403 ADM5C9JUS6 153 aa11.18□□□□□ -0.62
PABPC1-202ENST00000517403 AOC2O75106 756 aa11.18□□□□□ -0.62
PABPC1-202ENST00000517403 TXNRD3Q86VQ6 643 aa11.18□□□□□ -0.62
PABPC1-202ENST00000517403 MXD3Q9BW11 206 aa11.18□□□□□ -0.62
PABPC1-202ENST00000517403 ADARB2Q9NS39 739 aaKnown RBP11.18□□□□□ -0.62
PABPC1-202ENST00000517403 WBP1LQ9NX94 342 aa11.18□□□□□ -0.62
PABPC1-202ENST00000517403 PGAP2Q9UHJ9 254 aa11.18□□□□□ -0.62
PABPC1-202ENST00000517403 SCAF8Q9UPN6 1271 aaKnown RBP11.18□□□□□ -0.62
PABPC1-202ENST00000517403 ZNF609O15014 1411 aa11.18□□□□□ -0.62
PABPC1-202ENST00000517403 SNAP23O00161 211 aa11.17□□□□□ -0.62
PABPC1-202ENST00000517403 HSPA8P11142 646 aaKnown RBP11.17□□□□□ -0.62
PABPC1-202ENST00000517403 CTSWP56202 376 aa11.17□□□□□ -0.62
PABPC1-202ENST00000517403 RPS8P62241 208 aaKnown RBP11.17□□□□□ -0.62
PABPC1-202ENST00000517403 TWISTNBQ3B726 338 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-202ENST00000517403 TBC1D10BQ4KMP7 808 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-202ENST00000517403 USP50Q70EL3 339 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-202ENST00000517403 CCDC191Q8NCU4 936 aa11.17□□□□□ -0.62
PABPC1-202ENST00000517403 TTLL11Q8NHH1 800 aa11.17□□□□□ -0.62
PABPC1-202ENST00000517403 MRS2Q9HD23 443 aa11.17□□□□□ -0.62
PABPC1-202ENST00000517403 CWC25Q9NXE8 425 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-202ENST00000517403 PODXL2Q9NZ53 605 aa11.17□□□□□ -0.62
PABPC1-202ENST00000517403 TSKSQ9UJT2 592 aa11.17□□□□□ -0.62
PABPC1-202ENST00000517403 ZNF521Q96K83 1311 aa11.16□□□□□ -0.62
PABPC1-202ENST00000517403 WDR33Q9C0J8 1336 aaKnown RBP11.16□□□□□ -0.62
PABPC1-202ENST00000517403 F6X3S4 739 aa11.16□□□□□ -0.62
PABPC1-202ENST00000517403 PDE8AO60658 829 aa11.16□□□□□ -0.62
PABPC1-202ENST00000517403 VAMP4O75379 141 aa11.16□□□□□ -0.62
PABPC1-202ENST00000517403 UFL1O94874 794 aa11.16□□□□□ -0.62
PABPC1-202ENST00000517403 LMOD1P29536 600 aaPredicted RBP11.16□□□□□ -0.62
PABPC1-202ENST00000517403 WASHC4Q2M389 1173 aa11.16□□□□□ -0.62
PABPC1-202ENST00000517403 FAM161AQ3B820 660 aa11.16□□□□□ -0.62
PABPC1-202ENST00000517403 GRIPAP1Q4V328 841 aa11.16□□□□□ -0.62
PABPC1-202ENST00000517403 EPHA10Q5JZY3 1008 aa11.16□□□□□ -0.62
PABPC1-202ENST00000517403 KSR2Q6VAB6 950 aa11.16□□□□□ -0.62
PABPC1-202ENST00000517403 UBE3BQ7Z3V4 1068 aa11.16□□□□□ -0.62
PABPC1-202ENST00000517403 TNS4Q8IZW8 715 aa11.16□□□□□ -0.62
PABPC1-202ENST00000517403 SUPT20HQ8NEM7 779 aa11.16□□□□□ -0.62
PABPC1-202ENST00000517403 VPS33BQ9H267 617 aa11.16□□□□□ -0.62
PABPC1-202ENST00000517403 CNOT7Q9UIV1 285 aaKnown RBP11.16□□□□□ -0.62
PABPC1-202ENST00000517403 ABT1Q9ULW3 272 aaKnown RBP11.16□□□□□ -0.62
PABPC1-202ENST00000517403 TLL2Q9Y6L7 1015 aa11.16□□□□□ -0.62
PABPC1-202ENST00000517403 AOX1Q06278 1338 aa11.15□□□□□ -0.62
PABPC1-202ENST00000517403 C6orf229H3BNL8 230 aa11.15□□□□□ -0.62
PABPC1-202ENST00000517403 H7C1W4 665 aa11.15□□□□□ -0.62
PABPC1-202ENST00000517403 LBX1P52954 281 aa11.15□□□□□ -0.62
PABPC1-202ENST00000517403 EXOSC9Q06265 439 aaKnown RBP11.15□□□□□ -0.62
PABPC1-202ENST00000517403 FLIIQ13045 1269 aa11.15□□□□□ -0.62
PABPC1-202ENST00000517403 DEFB115Q30KQ5 88 aa11.15□□□□□ -0.62
PABPC1-202ENST00000517403 CCDC30Q5VVM6 783 aa11.15□□□□□ -0.62
PABPC1-202ENST00000517403 SAPCD2Q86UD0 394 aa11.15□□□□□ -0.62
PABPC1-202ENST00000517403 CAPNS2Q96L46 248 aa11.15□□□□□ -0.62
PABPC1-202ENST00000517403 GMLQ99445 158 aa11.15□□□□□ -0.62
PABPC1-202ENST00000517403 CACNA1FO60840 1977 aa11.15□□□□□ -0.62
PABPC1-202ENST00000517403 IL16Q14005 1332 aa11.14□□□□□ -0.63
PABPC1-202ENST00000517403 ZNF316A6NFI3 1004 aaPredicted RBP11.14□□□□□ -0.63
PABPC1-202ENST00000517403 CELF2O95319 508 aaKnown RBP11.14□□□□□ -0.63
PABPC1-202ENST00000517403 FAM155AB1AL88 458 aaPredicted RBP11.13□□□□□ -0.63
PABPC1-202ENST00000517403 VIL1P09327 827 aaKnown RBP11.13□□□□□ -0.63
PABPC1-202ENST00000517403 GRM1Q13255 1194 aa11.13□□□□□ -0.63
PABPC1-202ENST00000517403 GCKRQ14397 625 aa11.13□□□□□ -0.63
PABPC1-202ENST00000517403 TMC4Q7Z404 712 aa11.13□□□□□ -0.63
PABPC1-202ENST00000517403 USP48Q86UV5 1035 aa11.13□□□□□ -0.63
PABPC1-202ENST00000517403 ZNF408Q9H9D4 720 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms