RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 ANKIB1Q9P2G1 1089 aa16.15■□□□□ 0.18
CLCN3-210ENST00000515420 GGA1Q9UJY5 639 aa16.15■□□□□ 0.18
CLCN3-210ENST00000515420 C6orf229H3BNL8 230 aa16.14■□□□□ 0.17
CLCN3-210ENST00000515420 HSPA6P17066 643 aa16.14■□□□□ 0.17
CLCN3-210ENST00000515420 ARHGAP45Q92619 1136 aa16.14■□□□□ 0.17
CLCN3-210ENST00000515420 API5Q9BZZ5 524 aaKnown RBP16.14■□□□□ 0.17
CLCN3-210ENST00000515420 HACL1Q9UJ83 578 aa16.14■□□□□ 0.17
CLCN3-210ENST00000515420 ADAMTSL1Q8N6G6 1762 aa16.13■□□□□ 0.17
CLCN3-210ENST00000515420 ANKRD18BA2A2Z9 1011 aa16.13■□□□□ 0.17
CLCN3-210ENST00000515420 UFL1O94874 794 aa16.13■□□□□ 0.17
CLCN3-210ENST00000515420 ATP2B4P23634 1241 aa16.13■□□□□ 0.17
CLCN3-210ENST00000515420 CACNB1Q02641 598 aaPredicted RBP16.13■□□□□ 0.17
CLCN3-210ENST00000515420 IFIT5Q13325 482 aaKnown RBP16.13■□□□□ 0.17
CLCN3-210ENST00000515420 TAF1DQ9H5J8 278 aaPredicted RBP16.13■□□□□ 0.17
CLCN3-210ENST00000515420 MINPP1Q9UNW1 487 aa16.13■□□□□ 0.17
CLCN3-210ENST00000515420 PSME4Q14997 1843 aa16.12■□□□□ 0.17
CLCN3-210ENST00000515420 CCT4P50991 539 aaKnown RBP16.12■□□□□ 0.17
CLCN3-210ENST00000515420 CXCL9Q07325 125 aa16.12■□□□□ 0.17
CLCN3-210ENST00000515420 TNIP1Q15025 636 aa16.12■□□□□ 0.17
CLCN3-210ENST00000515420 CIAPIN1Q6FI81 312 aa16.12■□□□□ 0.17
CLCN3-210ENST00000515420 LMBR1LQ6UX01 489 aa16.12■□□□□ 0.17
CLCN3-210ENST00000515420 PNMA8AQ86V59 439 aaPredicted RBP16.12■□□□□ 0.17
CLCN3-210ENST00000515420 MPHOSPH8Q99549 860 aa16.12■□□□□ 0.17
CLCN3-210ENST00000515420 ZC3H12CQ9C0D7 883 aaKnown RBP16.12■□□□□ 0.17
CLCN3-210ENST00000515420 A0A1B0GUL6 1792 aa16.12■□□□□ 0.17
CLCN3-210ENST00000515420 NBPF7P0C2Y1 421 aaPredicted RBP16.11■□□□□ 0.17
CLCN3-210ENST00000515420 LMOD1P29536 600 aaPredicted RBP16.11■□□□□ 0.17
CLCN3-210ENST00000515420 SCNN1DP51172 638 aa16.11■□□□□ 0.17
CLCN3-210ENST00000515420 LDHDQ86WU2 507 aa16.11■□□□□ 0.17
CLCN3-210ENST00000515420 ANKRD2Q9GZV1 360 aa16.11■□□□□ 0.17
CLCN3-210ENST00000515420 NOB1Q9ULX3 412 aaKnown RBP16.11■□□□□ 0.17
CLCN3-210ENST00000515420 GJA3Q9Y6H8 435 aa16.11■□□□□ 0.17
CLCN3-210ENST00000515420 MED23Q9ULK4 1368 aa16.11■□□□□ 0.17
CLCN3-210ENST00000515420 YDJCA8MPS7 323 aa16.1■□□□□ 0.17
CLCN3-210ENST00000515420 EPHX2P34913 555 aa16.1■□□□□ 0.17
CLCN3-210ENST00000515420 CCDC57Q2TAC2 916 aa16.1■□□□□ 0.17
CLCN3-210ENST00000515420 RABL6Q3YEC7 729 aaPredicted RBP16.1■□□□□ 0.17
CLCN3-210ENST00000515420 EPHA10Q5JZY3 1008 aa16.1■□□□□ 0.17
CLCN3-210ENST00000515420 SUCLG2Q96I99 432 aa16.1■□□□□ 0.17
CLCN3-210ENST00000515420 USP44Q9H0E7 712 aa16.1■□□□□ 0.17
CLCN3-210ENST00000515420 LEMD3Q9Y2U8 911 aa16.1■□□□□ 0.17
CLCN3-210ENST00000515420 SCN9AQ15858 1988 aa16.09■□□□□ 0.17
CLCN3-210ENST00000515420 RIMBP2O15034 1052 aa16.09■□□□□ 0.17
CLCN3-210ENST00000515420 IPO8O15397 1037 aaKnown RBP16.09■□□□□ 0.17
CLCN3-210ENST00000515420 ECE2O60344 883 aa16.09■□□□□ 0.17
CLCN3-210ENST00000515420 APLP1P51693 650 aa16.09■□□□□ 0.17
CLCN3-210ENST00000515420 CHADLQ6NUI6 762 aa16.09■□□□□ 0.17
CLCN3-210ENST00000515420 KAZALD1Q96I82 304 aa16.09■□□□□ 0.17
CLCN3-210ENST00000515420 DBNDD1Q9H9R9 158 aa16.09■□□□□ 0.17
CLCN3-210ENST00000515420 CHMP3Q9Y3E7 222 aa16.09■□□□□ 0.17
CLCN3-210ENST00000515420 ZNF609O15014 1411 aa16.09■□□□□ 0.17
CLCN3-210ENST00000515420 BICC1Q9H694 974 aaKnown RBP16.08■□□□□ 0.16
CLCN3-210ENST00000515420 GPRC5DQ9NZD1 345 aa16.08■□□□□ 0.16
CLCN3-210ENST00000515420 HDAC5Q9UQL6 1122 aa16.08■□□□□ 0.16
CLCN3-210ENST00000515420 CEP350Q5VT06 3117 aa16.08■□□□□ 0.16
CLCN3-210ENST00000515420 RAD17O75943 681 aa16.07■□□□□ 0.16
CLCN3-210ENST00000515420 RPS12P25398 132 aaKnown RBP16.07■□□□□ 0.16
CLCN3-210ENST00000515420 CHRNDQ07001 517 aa16.07■□□□□ 0.16
CLCN3-210ENST00000515420 USP50Q70EL3 339 aaPredicted RBP16.07■□□□□ 0.16
CLCN3-210ENST00000515420 PODNQ7Z5L7 613 aa16.07■□□□□ 0.16
CLCN3-210ENST00000515420 DPF2Q92785 391 aa16.07■□□□□ 0.16
CLCN3-210ENST00000515420 ZNF804BA4D1E1 1349 aa16.06■□□□□ 0.16
CLCN3-210ENST00000515420 G3V3G9 751 aa16.06■□□□□ 0.16
CLCN3-210ENST00000515420 PSMD14O00487 310 aa16.06■□□□□ 0.16
CLCN3-210ENST00000515420 POTEIP0CG38 1075 aa16.06■□□□□ 0.16
CLCN3-210ENST00000515420 POTEJP0CG39 1038 aa16.06■□□□□ 0.16
CLCN3-210ENST00000515420 EPS15P42566 896 aa16.06■□□□□ 0.16
CLCN3-210ENST00000515420 GMPSP49915 693 aaPredicted RBP16.06■□□□□ 0.16
CLCN3-210ENST00000515420 TAF7LQ5H9L4 462 aa16.06■□□□□ 0.16
CLCN3-210ENST00000515420 DCAF8Q5TAQ9 597 aa16.06■□□□□ 0.16
CLCN3-210ENST00000515420 INTS3Q68E01 1043 aaKnown RBP16.06■□□□□ 0.16
CLCN3-210ENST00000515420 LDHAL6AQ6ZMR3 332 aa16.06■□□□□ 0.16
CLCN3-210ENST00000515420 ANKRD44Q8N8A2 993 aa16.06■□□□□ 0.16
CLCN3-210ENST00000515420 GPR101Q96P66 508 aaPredicted RBP16.06■□□□□ 0.16
CLCN3-210ENST00000515420 ADARB2Q9NS39 739 aaKnown RBP16.06■□□□□ 0.16
CLCN3-210ENST00000515420 DOK7Q18PE1 504 aa16.05■□□□□ 0.16
CLCN3-210ENST00000515420 EAPPQ56P03 285 aaPredicted RBP16.05■□□□□ 0.16
CLCN3-210ENST00000515420 ATF7IPQ6VMQ6 1270 aa16.05■□□□□ 0.16
CLCN3-210ENST00000515420 C15orf52Q6ZUT6 534 aaKnown RBP16.05■□□□□ 0.16
CLCN3-210ENST00000515420 COA1Q9GZY4 146 aa16.05■□□□□ 0.16
CLCN3-210ENST00000515420 ZNF646O15015 1829 aaPredicted RBP16.04■□□□□ 0.16
CLCN3-210ENST00000515420 VIL1P09327 827 aaKnown RBP16.04■□□□□ 0.16
CLCN3-210ENST00000515420 UBTFL1P0CB47 393 aaPredicted RBP16.04■□□□□ 0.16
CLCN3-210ENST00000515420 TRIM27P14373 513 aa16.04■□□□□ 0.16
CLCN3-210ENST00000515420 BCAR3O75815 825 aa16.03■□□□□ 0.16
CLCN3-210ENST00000515420 KCNJ4P48050 445 aa16.03■□□□□ 0.16
CLCN3-210ENST00000515420 AGBL3Q8NEM8 1001 aa16.03■□□□□ 0.16
CLCN3-210ENST00000515420 ZNF594Q96JF6 807 aaPredicted RBP16.03■□□□□ 0.16
CLCN3-210ENST00000515420 CNNM1Q9NRU3 951 aa16.03■□□□□ 0.16
CLCN3-210ENST00000515420 MROH5Q6ZUA9 1318 aa16.02■□□□□ 0.16
CLCN3-210ENST00000515420 PASKQ96RG2 1323 aa16.02■□□□□ 0.16
CLCN3-210ENST00000515420 IRS2Q9Y4H2 1338 aa16.02■□□□□ 0.16
CLCN3-210ENST00000515420 H7C1D1 291 aa16.02■□□□□ 0.16
CLCN3-210ENST00000515420 ZKSCAN2Q63HK3 967 aa16.02■□□□□ 0.16
CLCN3-210ENST00000515420 CNOT7Q9UIV1 285 aaKnown RBP16.02■□□□□ 0.16
CLCN3-210ENST00000515420 USP17L3A6NCW0 530 aa16.01■□□□□ 0.15
CLCN3-210ENST00000515420 USP17L4A6NCW7 530 aa16.01■□□□□ 0.15
CLCN3-210ENST00000515420 WTIPA6NIX2 430 aaPredicted RBP16.01■□□□□ 0.15
CLCN3-210ENST00000515420 GNAI3P08754 354 aa16.01■□□□□ 0.15
CLCN3-210ENST00000515420 UBE4AQ14139 1066 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms