RNA–Protein interactions for RNA: ENST00000515339.5

PACRGL-233, Transcript of parkin coregulated like, humanhuman

TSL 4

Gene PACRGL, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-233ENST00000515339 UFL1O94874 794 aa28.2■■■□□ 2.1
PACRGL-233ENST00000515339 GCKRQ14397 625 aa28.2■■■□□ 2.1
PACRGL-233ENST00000515339 GREM2Q9H772 168 aa28.2■■■□□ 2.1
PACRGL-233ENST00000515339 TMEM88BA6NKF7 163 aa28.19■■■□□ 2.1
PACRGL-233ENST00000515339 SHTN1A0MZ66 631 aa28.18■■■□□ 2.1
PACRGL-233ENST00000515339 ECE2O60344 883 aa28.18■■■□□ 2.1
PACRGL-233ENST00000515339 CDC5LQ99459 802 aaKnown RBP28.18■■■□□ 2.1
PACRGL-233ENST00000515339 KCNQ5Q9NR82 932 aa28.18■■■□□ 2.1
PACRGL-233ENST00000515339 GGA1Q9UJY5 639 aa28.18■■■□□ 2.1
PACRGL-233ENST00000515339 ZNF521Q96K83 1311 aa28.18■■■□□ 2.1
PACRGL-233ENST00000515339 F6X3S4 739 aa28.17■■■□□ 2.1
PACRGL-233ENST00000515339 PSMD14O00487 310 aa28.17■■■□□ 2.1
PACRGL-233ENST00000515339 FMR1Q06787 632 aaKnown RBP eCLIP28.17■■■□□ 2.1
PACRGL-233ENST00000515339 LINS1Q8NG48 757 aa28.17■■■□□ 2.1
PACRGL-233ENST00000515339 ZBTB12Q9Y330 459 aaPredicted RBP28.17■■■□□ 2.1
PACRGL-233ENST00000515339 SCN9AQ15858 1988 aa28.17■■■□□ 2.1
PACRGL-233ENST00000515339 CNTNAP1P78357 1384 aa28.16■■■□□ 2.1
PACRGL-233ENST00000515339 ZC3H12CQ9C0D7 883 aaKnown RBP28.16■■■□□ 2.1
PACRGL-233ENST00000515339 RTL9Q8NET4 1388 aa28.15■■■□□ 2.1
PACRGL-233ENST00000515339 CASP7P55210 303 aa28.15■■■□□ 2.1
PACRGL-233ENST00000515339 CNOT7Q9UIV1 285 aaKnown RBP28.15■■■□□ 2.1
PACRGL-233ENST00000515339 XDHP47989 1333 aa28.15■■■□□ 2.1
PACRGL-233ENST00000515339 TRPM4Q8TD43 1214 aa28.14■■■□□ 2.1
PACRGL-233ENST00000515339 TRPM7Q96QT4 1865 aa28.13■■■□□ 2.09
PACRGL-233ENST00000515339 TRAF5O00463 557 aa28.13■■■□□ 2.09
PACRGL-233ENST00000515339 MICALL2Q8IY33 904 aa28.13■■■□□ 2.09
PACRGL-233ENST00000515339 PLA2G12BQ9BX93 195 aa28.13■■■□□ 2.09
PACRGL-233ENST00000515339 HIRAP54198 1017 aaPredicted RBP28.12■■■□□ 2.09
PACRGL-233ENST00000515339 BSDC1Q9NW68 430 aaPredicted RBP28.12■■■□□ 2.09
PACRGL-233ENST00000515339 WTIPA6NIX2 430 aaPredicted RBP28.11■■■□□ 2.09
PACRGL-233ENST00000515339 G3V3G9 751 aa28.11■■■□□ 2.09
PACRGL-233ENST00000515339 FAM161AQ3B820 660 aa28.11■■■□□ 2.09
PACRGL-233ENST00000515339 DCAF8Q5TAQ9 597 aa28.11■■■□□ 2.09
PACRGL-233ENST00000515339 H7C1D1 291 aa28.1■■■□□ 2.09
PACRGL-233ENST00000515339 HSPA1AP0DMV8 641 aaKnown RBP28.1■■■□□ 2.09
PACRGL-233ENST00000515339 HSPA1BP0DMV9 641 aaKnown RBP28.1■■■□□ 2.09
PACRGL-233ENST00000515339 BEND3Q5T5X7 828 aa28.1■■■□□ 2.09
PACRGL-233ENST00000515339 DPF2Q92785 391 aa28.1■■■□□ 2.09
PACRGL-233ENST00000515339 MINPP1Q9UNW1 487 aa28.1■■■□□ 2.09
PACRGL-233ENST00000515339 ITGA6P23229 1130 aa28.09■■■□□ 2.09
PACRGL-233ENST00000515339 ATP2B4P23634 1241 aa28.09■■■□□ 2.09
PACRGL-233ENST00000515339 VEGFBP49765 207 aa28.09■■■□□ 2.09
PACRGL-233ENST00000515339 PSME4Q14997 1843 aa28.08■■■□□ 2.09
PACRGL-233ENST00000515339 SAMD7Q7Z3H4 446 aa28.08■■■□□ 2.09
PACRGL-233ENST00000515339 GLIS2Q9BZE0 524 aaPredicted RBP28.08■■■□□ 2.09
PACRGL-233ENST00000515339 ABT1Q9ULW3 272 aaKnown RBP28.08■■■□□ 2.09
PACRGL-233ENST00000515339 CSF1RP07333 972 aa28.07■■■□□ 2.08
PACRGL-233ENST00000515339 IGHMBP2P38935 993 aaKnown RBP28.07■■■□□ 2.08
PACRGL-233ENST00000515339 PGAP2Q9UHJ9 254 aa28.07■■■□□ 2.08
PACRGL-233ENST00000515339 RASSF10A6NK89 507 aa28.06■■■□□ 2.08
PACRGL-233ENST00000515339 EGFRP00533 1210 aa28.06■■■□□ 2.08
PACRGL-233ENST00000515339 VIL1P09327 827 aaKnown RBP28.06■■■□□ 2.08
PACRGL-233ENST00000515339 RPS12P25398 132 aaKnown RBP28.06■■■□□ 2.08
PACRGL-233ENST00000515339 TBC1D10BQ4KMP7 808 aaPredicted RBP28.06■■■□□ 2.08
PACRGL-233ENST00000515339 CCT4P50991 539 aaKnown RBP28.05■■■□□ 2.08
PACRGL-233ENST00000515339 IFFO2Q5TF58 517 aa28.05■■■□□ 2.08
PACRGL-233ENST00000515339 CST9Q5W186 159 aa28.05■■■□□ 2.08
PACRGL-233ENST00000515339 ZC3H15Q8WU90 426 aaKnown RBP28.05■■■□□ 2.08
PACRGL-233ENST00000515339 MED23Q9ULK4 1368 aa28.04■■■□□ 2.08
PACRGL-233ENST00000515339 DEFB115Q30KQ5 88 aa28.04■■■□□ 2.08
PACRGL-233ENST00000515339 SLC4A10Q6U841 1118 aa28.04■■■□□ 2.08
PACRGL-233ENST00000515339 FOXO4P98177 505 aa28.03■■■□□ 2.08
PACRGL-233ENST00000515339 MPHOSPH8Q99549 860 aa28.03■■■□□ 2.08
PACRGL-233ENST00000515339 E9PSI1 815 aa28.02■■■□□ 2.08
PACRGL-233ENST00000515339 RBM26Q5T8P6 1007 aaKnown RBP28.02■■■□□ 2.08
PACRGL-233ENST00000515339 COL13A1Q5TAT6 717 aaPredicted RBP28.02■■■□□ 2.08
PACRGL-233ENST00000515339 CHMP3Q9Y3E7 222 aa28.02■■■□□ 2.08
PACRGL-233ENST00000515339 POLR2AP24928 1970 aaKnown RBP28.01■■■□□ 2.07
PACRGL-233ENST00000515339 ANKRD18BA2A2Z9 1011 aa28.01■■■□□ 2.07
PACRGL-233ENST00000515339 GRM8O00222 908 aa28.01■■■□□ 2.07
PACRGL-233ENST00000515339 CELF2O95319 508 aaKnown RBP28.01■■■□□ 2.07
PACRGL-233ENST00000515339 EPHA10Q5JZY3 1008 aa28.01■■■□□ 2.07
PACRGL-233ENST00000515339 RSBN1LQ6PCB5 846 aaPredicted RBP28■■■□□ 2.07
PACRGL-233ENST00000515339 CDC37L1Q7L3B6 337 aa28■■■□□ 2.07
PACRGL-233ENST00000515339 MRPL50Q8N5N7 158 aaKnown RBP28■■■□□ 2.07
PACRGL-233ENST00000515339 ZNF646O15015 1829 aaPredicted RBP27.99■■■□□ 2.07
PACRGL-233ENST00000515339 A0A1B0GUL6 1792 aa27.99■■■□□ 2.07
PACRGL-233ENST00000515339 SLFN5Q08AF3 891 aa27.99■■■□□ 2.07
PACRGL-233ENST00000515339 DLK2Q6UY11 383 aa27.99■■■□□ 2.07
PACRGL-233ENST00000515339 PODNQ7Z5L7 613 aa27.99■■■□□ 2.07
PACRGL-233ENST00000515339 USP48Q86UV5 1035 aa27.99■■■□□ 2.07
PACRGL-233ENST00000515339 TXNRD3Q86VQ6 643 aa27.99■■■□□ 2.07
PACRGL-233ENST00000515339 SRCIN1Q9C0H9 1055 aa27.99■■■□□ 2.07
PACRGL-233ENST00000515339 ZNF408Q9H9D4 720 aa27.99■■■□□ 2.07
PACRGL-233ENST00000515339 C9orf78Q9NZ63 289 aaPredicted RBP27.99■■■□□ 2.07
PACRGL-233ENST00000515339 LEMD3Q9Y2U8 911 aa27.99■■■□□ 2.07
PACRGL-233ENST00000515339 ALDH1L1O75891 902 aa27.98■■■□□ 2.07
PACRGL-233ENST00000515339 KLRK1P26718 216 aa27.98■■■□□ 2.07
PACRGL-233ENST00000515339 IFIT5Q13325 482 aaKnown RBP27.98■■■□□ 2.07
PACRGL-233ENST00000515339 KIF4BQ2VIQ3 1234 aa27.98■■■□□ 2.07
PACRGL-233ENST00000515339 LMBR1LQ6UX01 489 aa27.98■■■□□ 2.07
PACRGL-233ENST00000515339 PAXIP1Q6ZW49 1069 aaPredicted RBP27.98■■■□□ 2.07
PACRGL-233ENST00000515339 AGBL3Q8NEM8 1001 aa27.98■■■□□ 2.07
PACRGL-233ENST00000515339 CDCA7LQ96GN5 454 aa27.98■■■□□ 2.07
PACRGL-233ENST00000515339 ANKRD2Q9GZV1 360 aa27.98■■■□□ 2.07
PACRGL-233ENST00000515339 ZNF609O15014 1411 aa27.98■■■□□ 2.07
PACRGL-233ENST00000515339 ZNF804BA4D1E1 1349 aa27.97■■■□□ 2.07
PACRGL-233ENST00000515339 WDR33Q9C0J8 1336 aaKnown RBP27.97■■■□□ 2.07
PACRGL-233ENST00000515339 USP17L3A6NCW0 530 aa27.97■■■□□ 2.07
PACRGL-233ENST00000515339 USP17L4A6NCW7 530 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms