RNA–Protein interactions for RNA: ENST00000515316.5

SPOCK3-224, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 4

Gene SPOCK3, Length 524 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-224ENST00000515316 IARSP41252 1262 aaKnown RBP31.58■■■□□ 2.65
SPOCK3-224ENST00000515316 PRELPP51888 382 aa31.58■■■□□ 2.65
SPOCK3-224ENST00000515316 ZNF594Q96JF6 807 aaPredicted RBP31.58■■■□□ 2.65
SPOCK3-224ENST00000515316 ANKRD2Q9GZV1 360 aa31.58■■■□□ 2.65
SPOCK3-224ENST00000515316 COG6Q9Y2V7 657 aa31.58■■■□□ 2.65
SPOCK3-224ENST00000515316 CNNM1Q9NRU3 951 aa31.57■■■□□ 2.64
SPOCK3-224ENST00000515316 XDHP47989 1333 aa31.56■■■□□ 2.64
SPOCK3-224ENST00000515316 LRRC37AA6NMS7 1700 aa31.56■■■□□ 2.64
SPOCK3-224ENST00000515316 RRP1P56182 461 aaKnown RBP31.56■■■□□ 2.64
SPOCK3-224ENST00000515316 GGA1Q9UJY5 639 aa31.56■■■□□ 2.64
SPOCK3-224ENST00000515316 SBF1O95248 1867 aa31.56■■■□□ 2.64
SPOCK3-224ENST00000515316 C6orf229H3BNL8 230 aa31.55■■■□□ 2.64
SPOCK3-224ENST00000515316 EYA3Q99504 573 aa31.55■■■□□ 2.64
SPOCK3-224ENST00000515316 ZC3H4Q9UPT8 1303 aaKnown RBP31.54■■■□□ 2.64
SPOCK3-224ENST00000515316 ATP2B4P23634 1241 aa31.54■■■□□ 2.64
SPOCK3-224ENST00000515316 TBC1D16Q8TBP0 767 aa31.54■■■□□ 2.64
SPOCK3-224ENST00000515316 MTX1Q13505 466 aa31.53■■■□□ 2.64
SPOCK3-224ENST00000515316 C20orf194Q5TEA3 1177 aa31.53■■■□□ 2.64
SPOCK3-224ENST00000515316 LARGE2Q8N3Y3 721 aa31.53■■■□□ 2.64
SPOCK3-224ENST00000515316 JDP2Q8WYK2 163 aa31.53■■■□□ 2.64
SPOCK3-224ENST00000515316 POLLQ9UGP5 575 aa31.53■■■□□ 2.64
SPOCK3-224ENST00000515316 PPIP5K2O43314 1243 aa31.52■■■□□ 2.64
SPOCK3-224ENST00000515316 CHRNDQ07001 517 aa31.52■■■□□ 2.64
SPOCK3-224ENST00000515316 WASHC4Q2M389 1173 aa31.52■■■□□ 2.64
SPOCK3-224ENST00000515316 LEMD3Q9Y2U8 911 aa31.52■■■□□ 2.64
SPOCK3-224ENST00000515316 UFL1O94874 794 aa31.51■■■□□ 2.63
SPOCK3-224ENST00000515316 RFX5P48382 616 aaPredicted RBP31.51■■■□□ 2.63
SPOCK3-224ENST00000515316 SRGAP3O43295 1099 aa31.5■■■□□ 2.63
SPOCK3-224ENST00000515316 CCDC88AQ3V6T2 1871 aa31.5■■■□□ 2.63
SPOCK3-224ENST00000515316 PTPN12Q05209 780 aaKnown RBP31.49■■■□□ 2.63
SPOCK3-224ENST00000515316 KIAA2012Q0VF49 1180 aa31.49■■■□□ 2.63
SPOCK3-224ENST00000515316 AOC3Q16853 763 aa31.49■■■□□ 2.63
SPOCK3-224ENST00000515316 ZC3H12CQ9C0D7 883 aaKnown RBP31.49■■■□□ 2.63
SPOCK3-224ENST00000515316 FBXO3Q9UK99 471 aa31.49■■■□□ 2.63
SPOCK3-224ENST00000515316 RIPOR2Q9Y4F9 1068 aa31.49■■■□□ 2.63
SPOCK3-224ENST00000515316 SPEF2Q9C093 1822 aa31.49■■■□□ 2.63
SPOCK3-224ENST00000515316 MROH5Q6ZUA9 1318 aa31.49■■■□□ 2.63
SPOCK3-224ENST00000515316 KLHDC4Q8TBB5 520 aa31.48■■■□□ 2.63
SPOCK3-224ENST00000515316 PUS3Q9BZE2 481 aaKnown RBP31.48■■■□□ 2.63
SPOCK3-224ENST00000515316 ATP8B2P98198 1209 aa31.47■■■□□ 2.63
SPOCK3-224ENST00000515316 NIM1KQ8IY84 436 aa31.47■■■□□ 2.63
SPOCK3-224ENST00000515316 C1orf115Q9H7X2 142 aa31.47■■■□□ 2.63
SPOCK3-224ENST00000515316 EYA2O00167 538 aa31.46■■■□□ 2.63
SPOCK3-224ENST00000515316 KCNJ4P48050 445 aa31.46■■■□□ 2.63
SPOCK3-224ENST00000515316 COPRSQ9NQ92 184 aa31.46■■■□□ 2.63
SPOCK3-224ENST00000515316 ZBTB40Q9NUA8 1239 aa31.46■■■□□ 2.63
SPOCK3-224ENST00000515316 DICER1Q9UPY3 1922 aaKnown RBP31.45■■■□□ 2.63
SPOCK3-224ENST00000515316 RIMBP2O15034 1052 aa31.45■■■□□ 2.63
SPOCK3-224ENST00000515316 LRRC24Q50LG9 513 aa31.45■■■□□ 2.63
SPOCK3-224ENST00000515316 DPY19L2Q6NUT2 758 aa31.45■■■□□ 2.63
SPOCK3-224ENST00000515316 HELBQ8NG08 1087 aaPredicted RBP31.45■■■□□ 2.63
SPOCK3-224ENST00000515316 ZNF804BA4D1E1 1349 aa31.45■■■□□ 2.62
SPOCK3-224ENST00000515316 DUOX1Q9NRD9 1551 aa31.44■■■□□ 2.62
SPOCK3-224ENST00000515316 CIAO1O76071 339 aa31.44■■■□□ 2.62
SPOCK3-224ENST00000515316 G3V3G9 751 aa31.43■■■□□ 2.62
SPOCK3-224ENST00000515316 TAF5LO75529 589 aa31.43■■■□□ 2.62
SPOCK3-224ENST00000515316 METTL24Q5JXM2 366 aa31.43■■■□□ 2.62
SPOCK3-224ENST00000515316 DCAF8Q5TAQ9 597 aa31.43■■■□□ 2.62
SPOCK3-224ENST00000515316 LTBP1Q14766 1721 aa31.43■■■□□ 2.62
SPOCK3-224ENST00000515316 PNMA6EA0A0J9YXQ4 647 aa31.42■■■□□ 2.62
SPOCK3-224ENST00000515316 FZD9O00144 591 aa31.42■■■□□ 2.62
SPOCK3-224ENST00000515316 EIF6P56537 245 aaKnown RBP31.42■■■□□ 2.62
SPOCK3-224ENST00000515316 ZNRF3Q9ULT6 936 aa31.42■■■□□ 2.62
SPOCK3-224ENST00000515316 GPR101Q96P66 508 aaPredicted RBP31.41■■■□□ 2.62
SPOCK3-224ENST00000515316 SIL1Q9H173 461 aa31.41■■■□□ 2.62
SPOCK3-224ENST00000515316 SUPT16HQ9Y5B9 1047 aaKnown RBP31.41■■■□□ 2.62
SPOCK3-224ENST00000515316 GLTPD2A6NH11 291 aa31.4■■■□□ 2.62
SPOCK3-224ENST00000515316 IL15P40933 162 aaPredicted RBP31.4■■■□□ 2.62
SPOCK3-224ENST00000515316 RPAP2Q8IXW5 612 aaPredicted RBP31.4■■■□□ 2.62
SPOCK3-224ENST00000515316 SSH3Q8TE77 659 aa31.4■■■□□ 2.62
SPOCK3-224ENST00000515316 PA2G4Q9UQ80 394 aaKnown RBP31.4■■■□□ 2.62
SPOCK3-224ENST00000515316 KDM2BQ8NHM5 1336 aa31.4■■■□□ 2.62
SPOCK3-224ENST00000515316 UBE4AQ14139 1066 aa31.39■■■□□ 2.62
SPOCK3-224ENST00000515316 POLA2Q14181 598 aa31.39■■■□□ 2.62
SPOCK3-224ENST00000515316 CEP85Q6P2H3 762 aa31.39■■■□□ 2.62
SPOCK3-224ENST00000515316 MED23Q9ULK4 1368 aa31.39■■■□□ 2.62
SPOCK3-224ENST00000515316 WTIPA6NIX2 430 aaPredicted RBP31.38■■■□□ 2.61
SPOCK3-224ENST00000515316 PDE8BO95263 885 aa31.38■■■□□ 2.61
SPOCK3-224ENST00000515316 ATG9AQ7Z3C6 839 aa31.38■■■□□ 2.61
SPOCK3-224ENST00000515316 DOK7Q18PE1 504 aa31.37■■■□□ 2.61
SPOCK3-224ENST00000515316 ZNF784Q8NCA9 323 aaPredicted RBP31.37■■■□□ 2.61
SPOCK3-224ENST00000515316 CEP126Q9P2H0 1117 aa31.37■■■□□ 2.61
SPOCK3-224ENST00000515316 TIAM2Q8IVF5 1701 aa31.37■■■□□ 2.61
SPOCK3-224ENST00000515316 G3BP1Q13283 466 aaKnown RBP eCLIP31.36■■■□□ 2.61
SPOCK3-224ENST00000515316 C15orf52Q6ZUT6 534 aaKnown RBP31.36■■■□□ 2.61
SPOCK3-224ENST00000515316 DBNDD1Q9H9R9 158 aa31.36■■■□□ 2.61
SPOCK3-224ENST00000515316 ZNF526Q8TF50 670 aaPredicted RBP31.35■■■□□ 2.61
SPOCK3-224ENST00000515316 COL4A5P29400 1685 aa31.35■■■□□ 2.61
SPOCK3-224ENST00000515316 ECE2O60344 883 aa31.34■■■□□ 2.61
SPOCK3-224ENST00000515316 VGLL2Q8N8G2 317 aa31.34■■■□□ 2.61
SPOCK3-224ENST00000515316 COA1Q9GZY4 146 aa31.34■■■□□ 2.61
SPOCK3-224ENST00000515316 GPBP1L1Q9HC44 474 aaPredicted RBP31.34■■■□□ 2.61
SPOCK3-224ENST00000515316 SNAP23O00161 211 aa31.33■■■□□ 2.61
SPOCK3-224ENST00000515316 HMMRO75330 724 aa31.33■■■□□ 2.61
SPOCK3-224ENST00000515316 TNIP1Q15025 636 aa31.33■■■□□ 2.61
SPOCK3-224ENST00000515316 PODNQ7Z5L7 613 aa31.33■■■□□ 2.61
SPOCK3-224ENST00000515316 ZNF541Q9H0D2 1346 aa31.32■■■□□ 2.6
SPOCK3-224ENST00000515316 PUM3Q15397 648 aaKnown RBP31.32■■■□□ 2.6
SPOCK3-224ENST00000515316 GPC2Q8N158 579 aa31.32■■■□□ 2.6
SPOCK3-224ENST00000515316 CRBNQ96SW2 442 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms