RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 LDHDQ86WU2 507 aa16.6■□□□□ 0.25
CDK7-212ENST00000515180 TRMT2AQ8IZ69 625 aaKnown RBP16.6■□□□□ 0.25
CDK7-212ENST00000515180 DNAJC5GQ8N7S2 189 aa16.6■□□□□ 0.25
CDK7-212ENST00000515180 KCNQ5Q9NR82 932 aa16.6■□□□□ 0.25
CDK7-212ENST00000515180 PODXL2Q9NZ53 605 aa16.6■□□□□ 0.25
CDK7-212ENST00000515180 CSF1RP07333 972 aa16.59■□□□□ 0.25
CDK7-212ENST00000515180 ITGA6P23229 1130 aa16.59■□□□□ 0.25
CDK7-212ENST00000515180 GMPSP49915 693 aaPredicted RBP16.59■□□□□ 0.25
CDK7-212ENST00000515180 FOXO4P98177 505 aa16.59■□□□□ 0.25
CDK7-212ENST00000515180 EPHA10Q5JZY3 1008 aa16.59■□□□□ 0.25
CDK7-212ENST00000515180 GGA1Q9UJY5 639 aa16.59■□□□□ 0.25
CDK7-212ENST00000515180 SHTN1A0MZ66 631 aa16.58■□□□□ 0.24
CDK7-212ENST00000515180 ECE2O60344 883 aa16.58■□□□□ 0.24
CDK7-212ENST00000515180 MAP1SQ66K74 1059 aaPredicted RBP16.58■□□□□ 0.24
CDK7-212ENST00000515180 EYA3Q99504 573 aa16.58■□□□□ 0.24
CDK7-212ENST00000515180 ZC3H12CQ9C0D7 883 aaKnown RBP16.58■□□□□ 0.24
CDK7-212ENST00000515180 MINPP1Q9UNW1 487 aa16.58■□□□□ 0.24
CDK7-212ENST00000515180 RTL9Q8NET4 1388 aa16.58■□□□□ 0.24
CDK7-212ENST00000515180 ADAMTSL1Q8N6G6 1762 aa16.57■□□□□ 0.24
CDK7-212ENST00000515180 XDHP47989 1333 aa16.57■□□□□ 0.24
CDK7-212ENST00000515180 GRM8O00222 908 aa16.57■□□□□ 0.24
CDK7-212ENST00000515180 PNMA8AQ86V59 439 aaPredicted RBP16.57■□□□□ 0.24
CDK7-212ENST00000515180 SRCIN1Q9C0H9 1055 aa16.57■□□□□ 0.24
CDK7-212ENST00000515180 BSDC1Q9NW68 430 aaPredicted RBP16.57■□□□□ 0.24
CDK7-212ENST00000515180 C9orf78Q9NZ63 289 aaPredicted RBP16.57■□□□□ 0.24
CDK7-212ENST00000515180 GPRC5DQ9NZD1 345 aa16.57■□□□□ 0.24
CDK7-212ENST00000515180 ZBTB12Q9Y330 459 aaPredicted RBP16.57■□□□□ 0.24
CDK7-212ENST00000515180 CHMP3Q9Y3E7 222 aa16.57■□□□□ 0.24
CDK7-212ENST00000515180 PSMD14O00487 310 aa16.56■□□□□ 0.24
CDK7-212ENST00000515180 ALDH1L1O75891 902 aa16.56■□□□□ 0.24
CDK7-212ENST00000515180 ITGBL1O95965 494 aaPredicted RBP16.56■□□□□ 0.24
CDK7-212ENST00000515180 IGHMBP2P38935 993 aaKnown RBP16.56■□□□□ 0.24
CDK7-212ENST00000515180 TNIP1Q15025 636 aa16.56■□□□□ 0.24
CDK7-212ENST00000515180 G3V3G9 751 aa16.55■□□□□ 0.24
CDK7-212ENST00000515180 ATP2B4P23634 1241 aa16.55■□□□□ 0.24
CDK7-212ENST00000515180 DCAF8Q5TAQ9 597 aa16.55■□□□□ 0.24
CDK7-212ENST00000515180 LMBR1LQ6UX01 489 aa16.55■□□□□ 0.24
CDK7-212ENST00000515180 CNTROBQ8N137 903 aa16.55■□□□□ 0.24
CDK7-212ENST00000515180 SMC4Q9NTJ3 1288 aa16.55■□□□□ 0.24
CDK7-212ENST00000515180 SCN9AQ15858 1988 aa16.55■□□□□ 0.24
CDK7-212ENST00000515180 PASKQ96RG2 1323 aa16.54■□□□□ 0.24
CDK7-212ENST00000515180 ANKRD18BA2A2Z9 1011 aa16.54■□□□□ 0.24
CDK7-212ENST00000515180 NBPF7P0C2Y1 421 aaPredicted RBP16.54■□□□□ 0.24
CDK7-212ENST00000515180 CCT4P50991 539 aaKnown RBP16.54■□□□□ 0.24
CDK7-212ENST00000515180 FMR1Q06787 632 aaKnown RBP eCLIP16.54■□□□□ 0.24
CDK7-212ENST00000515180 KLRG1Q96E93 195 aa16.54■□□□□ 0.24
CDK7-212ENST00000515180 SUCLG2Q96I99 432 aa16.54■□□□□ 0.24
CDK7-212ENST00000515180 ZNF594Q96JF6 807 aaPredicted RBP16.54■□□□□ 0.24
CDK7-212ENST00000515180 MPHOSPH8Q99549 860 aa16.54■□□□□ 0.24
CDK7-212ENST00000515180 CNOT7Q9UIV1 285 aaKnown RBP16.54■□□□□ 0.24
CDK7-212ENST00000515180 PTPRCP08575 1304 aa16.53■□□□□ 0.24
CDK7-212ENST00000515180 ALDH1L2Q3SY69 923 aa16.53■□□□□ 0.24
CDK7-212ENST00000515180 USP50Q70EL3 339 aaPredicted RBP16.53■□□□□ 0.24
CDK7-212ENST00000515180 HELBQ8NG08 1087 aaPredicted RBP16.53■□□□□ 0.24
CDK7-212ENST00000515180 TRPM4Q8TD43 1214 aa16.53■□□□□ 0.24
CDK7-212ENST00000515180 KAZALD1Q96I82 304 aa16.53■□□□□ 0.24
CDK7-212ENST00000515180 ADARB2Q9NS39 739 aaKnown RBP16.53■□□□□ 0.24
CDK7-212ENST00000515180 SNAP23O00161 211 aa16.52■□□□□ 0.24
CDK7-212ENST00000515180 HIRAP54198 1017 aaPredicted RBP16.52■□□□□ 0.24
CDK7-212ENST00000515180 IFIT5Q13325 482 aaKnown RBP16.52■□□□□ 0.24
CDK7-212ENST00000515180 TXNRD3Q86VQ6 643 aa16.52■□□□□ 0.24
CDK7-212ENST00000515180 MICALL2Q8IY33 904 aa16.52■□□□□ 0.24
CDK7-212ENST00000515180 TAF5LO75529 589 aa16.51■□□□□ 0.23
CDK7-212ENST00000515180 KLRK1P26718 216 aa16.51■□□□□ 0.23
CDK7-212ENST00000515180 HNRNPUQ00839 825 aaKnown RBP eCLIP16.51■□□□□ 0.23
CDK7-212ENST00000515180 CHRNDQ07001 517 aa16.51■□□□□ 0.23
CDK7-212ENST00000515180 SAMD7Q7Z3H4 446 aa16.51■□□□□ 0.23
CDK7-212ENST00000515180 NOB1Q9ULX3 412 aaKnown RBP16.51■□□□□ 0.23
CDK7-212ENST00000515180 H7C1D1 291 aa16.5■□□□□ 0.23
CDK7-212ENST00000515180 RBM26Q5T8P6 1007 aaKnown RBP16.5■□□□□ 0.23
CDK7-212ENST00000515180 LEMD3Q9Y2U8 911 aa16.5■□□□□ 0.23
CDK7-212ENST00000515180 MED23Q9ULK4 1368 aa16.5■□□□□ 0.23
CDK7-212ENST00000515180 ZNF804BA4D1E1 1349 aa16.49■□□□□ 0.23
CDK7-212ENST00000515180 UTYO14607 1347 aa16.49■□□□□ 0.23
CDK7-212ENST00000515180 TRAF5O00463 557 aa16.49■□□□□ 0.23
CDK7-212ENST00000515180 EGFRP00533 1210 aa16.49■□□□□ 0.23
CDK7-212ENST00000515180 VIL1P09327 827 aaKnown RBP16.49■□□□□ 0.23
CDK7-212ENST00000515180 CCDC57Q2TAC2 916 aa16.49■□□□□ 0.23
CDK7-212ENST00000515180 TBC1D10BQ4KMP7 808 aaPredicted RBP16.49■□□□□ 0.23
CDK7-212ENST00000515180 TAF7LQ5H9L4 462 aa16.49■□□□□ 0.23
CDK7-212ENST00000515180 DPF2Q92785 391 aa16.49■□□□□ 0.23
CDK7-212ENST00000515180 ANKRD2Q9GZV1 360 aa16.49■□□□□ 0.23
CDK7-212ENST00000515180 BICC1Q9H694 974 aaKnown RBP16.49■□□□□ 0.23
CDK7-212ENST00000515180 CREBZFQ9NS37 354 aa16.49■□□□□ 0.23
CDK7-212ENST00000515180 MKRN1Q9UHC7 482 aaKnown RBP16.49■□□□□ 0.23
CDK7-212ENST00000515180 PLIN1O60240 522 aa16.48■□□□□ 0.23
CDK7-212ENST00000515180 CT47B1P0C2W7 299 aaPredicted RBP16.48■□□□□ 0.23
CDK7-212ENST00000515180 RARSP54136 660 aaKnown RBP16.48■□□□□ 0.23
CDK7-212ENST00000515180 MXD3Q9BW11 206 aa16.48■□□□□ 0.23
CDK7-212ENST00000515180 GLIS2Q9BZE0 524 aaPredicted RBP16.48■□□□□ 0.23
CDK7-212ENST00000515180 PUS3Q9BZE2 481 aaKnown RBP16.48■□□□□ 0.23
CDK7-212ENST00000515180 USP44Q9H0E7 712 aa16.48■□□□□ 0.23
CDK7-212ENST00000515180 TMEM88BA6NKF7 163 aa16.47■□□□□ 0.23
CDK7-212ENST00000515180 KCNJ4P48050 445 aa16.47■□□□□ 0.23
CDK7-212ENST00000515180 RSBN1LQ6PCB5 846 aaPredicted RBP16.47■□□□□ 0.23
CDK7-212ENST00000515180 DLK2Q6UY11 383 aa16.47■□□□□ 0.23
CDK7-212ENST00000515180 LDHAL6AQ6ZMR3 332 aa16.47■□□□□ 0.23
CDK7-212ENST00000515180 PODNQ7Z5L7 613 aa16.47■□□□□ 0.23
CDK7-212ENST00000515180 ANKRD44Q8N8A2 993 aa16.47■□□□□ 0.23
CDK7-212ENST00000515180 FBXW7Q969H0 707 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms