RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 FOXO4P98177 505 aa17.66■□□□□ 0.42
ITGA3-214ENST00000514834 FAM161AQ3B820 660 aa17.66■□□□□ 0.42
ITGA3-214ENST00000514834 EPHA10Q5JZY3 1008 aa17.66■□□□□ 0.42
ITGA3-214ENST00000514834 SLC4A10Q6U841 1118 aa17.66■□□□□ 0.42
ITGA3-214ENST00000514834 LDHDQ86WU2 507 aa17.66■□□□□ 0.42
ITGA3-214ENST00000514834 PODXL2Q9NZ53 605 aa17.66■□□□□ 0.42
ITGA3-214ENST00000514834 ANKIB1Q9P2G1 1089 aa17.66■□□□□ 0.42
ITGA3-214ENST00000514834 RTL9Q8NET4 1388 aa17.66■□□□□ 0.42
ITGA3-214ENST00000514834 UFL1O94874 794 aa17.65■□□□□ 0.42
ITGA3-214ENST00000514834 ITGBL1O95965 494 aaPredicted RBP17.65■□□□□ 0.42
ITGA3-214ENST00000514834 GMPSP49915 693 aaPredicted RBP17.65■□□□□ 0.42
ITGA3-214ENST00000514834 CIAPIN1Q6FI81 312 aa17.65■□□□□ 0.42
ITGA3-214ENST00000514834 CLEC11AQ9Y240 323 aa17.65■□□□□ 0.42
ITGA3-214ENST00000514834 SCN9AQ15858 1988 aa17.65■□□□□ 0.42
ITGA3-214ENST00000514834 MAP1SQ66K74 1059 aaPredicted RBP17.64■□□□□ 0.41
ITGA3-214ENST00000514834 CDC5LQ99459 802 aaKnown RBP17.64■□□□□ 0.41
ITGA3-214ENST00000514834 GPRC5DQ9NZD1 345 aa17.64■□□□□ 0.41
ITGA3-214ENST00000514834 MINPP1Q9UNW1 487 aa17.64■□□□□ 0.41
ITGA3-214ENST00000514834 ZBTB12Q9Y330 459 aaPredicted RBP17.64■□□□□ 0.41
ITGA3-214ENST00000514834 ECE2O60344 883 aa17.63■□□□□ 0.41
ITGA3-214ENST00000514834 ITGA6P23229 1130 aa17.63■□□□□ 0.41
ITGA3-214ENST00000514834 LMOD1P29536 600 aaPredicted RBP17.63■□□□□ 0.41
ITGA3-214ENST00000514834 BSDC1Q9NW68 430 aaPredicted RBP17.63■□□□□ 0.41
ITGA3-214ENST00000514834 GGA1Q9UJY5 639 aa17.63■□□□□ 0.41
ITGA3-214ENST00000514834 GRM8O00222 908 aa17.62■□□□□ 0.41
ITGA3-214ENST00000514834 PSMD14O00487 310 aa17.62■□□□□ 0.41
ITGA3-214ENST00000514834 FMR1Q06787 632 aaKnown RBP eCLIP17.62■□□□□ 0.41
ITGA3-214ENST00000514834 PNMA8AQ86V59 439 aaPredicted RBP17.62■□□□□ 0.41
ITGA3-214ENST00000514834 ZC3H12CQ9C0D7 883 aaKnown RBP17.62■□□□□ 0.41
ITGA3-214ENST00000514834 XDHP47989 1333 aa17.62■□□□□ 0.41
ITGA3-214ENST00000514834 PASKQ96RG2 1323 aa17.62■□□□□ 0.41
ITGA3-214ENST00000514834 ALDH1L1O75891 902 aa17.61■□□□□ 0.41
ITGA3-214ENST00000514834 TNIP1Q15025 636 aa17.61■□□□□ 0.41
ITGA3-214ENST00000514834 KAZALD1Q96I82 304 aa17.61■□□□□ 0.41
ITGA3-214ENST00000514834 EYA3Q99504 573 aa17.61■□□□□ 0.41
ITGA3-214ENST00000514834 SRCIN1Q9C0H9 1055 aa17.61■□□□□ 0.41
ITGA3-214ENST00000514834 NBPF7P0C2Y1 421 aaPredicted RBP17.6■□□□□ 0.41
ITGA3-214ENST00000514834 HIRAP54198 1017 aaPredicted RBP17.6■□□□□ 0.41
ITGA3-214ENST00000514834 LMBR1LQ6UX01 489 aa17.6■□□□□ 0.41
ITGA3-214ENST00000514834 CNTROBQ8N137 903 aa17.6■□□□□ 0.41
ITGA3-214ENST00000514834 KLRG1Q96E93 195 aa17.6■□□□□ 0.41
ITGA3-214ENST00000514834 PCNTO95613 3336 aa17.59■□□□□ 0.41
ITGA3-214ENST00000514834 SNAP23O00161 211 aa17.59■□□□□ 0.41
ITGA3-214ENST00000514834 ATP2B4P23634 1241 aa17.59■□□□□ 0.41
ITGA3-214ENST00000514834 TXNRD3Q86VQ6 643 aa17.59■□□□□ 0.41
ITGA3-214ENST00000514834 TRPM4Q8TD43 1214 aa17.59■□□□□ 0.41
ITGA3-214ENST00000514834 SUCLG2Q96I99 432 aa17.59■□□□□ 0.41
ITGA3-214ENST00000514834 ZNF594Q96JF6 807 aaPredicted RBP17.59■□□□□ 0.41
ITGA3-214ENST00000514834 ADARB2Q9NS39 739 aaKnown RBP17.59■□□□□ 0.41
ITGA3-214ENST00000514834 C9orf78Q9NZ63 289 aaPredicted RBP17.59■□□□□ 0.41
ITGA3-214ENST00000514834 CNOT7Q9UIV1 285 aaKnown RBP17.59■□□□□ 0.41
ITGA3-214ENST00000514834 CHMP3Q9Y3E7 222 aa17.59■□□□□ 0.41
ITGA3-214ENST00000514834 EGFRP00533 1210 aa17.58■□□□□ 0.4
ITGA3-214ENST00000514834 KLRK1P26718 216 aa17.58■□□□□ 0.4
ITGA3-214ENST00000514834 IGHMBP2P38935 993 aaKnown RBP17.58■□□□□ 0.4
ITGA3-214ENST00000514834 CCT4P50991 539 aaKnown RBP17.58■□□□□ 0.4
ITGA3-214ENST00000514834 USP50Q70EL3 339 aaPredicted RBP17.58■□□□□ 0.4
ITGA3-214ENST00000514834 PTPRCP08575 1304 aa17.57■□□□□ 0.4
ITGA3-214ENST00000514834 ANKRD18BA2A2Z9 1011 aa17.57■□□□□ 0.4
ITGA3-214ENST00000514834 TRAF5O00463 557 aa17.57■□□□□ 0.4
ITGA3-214ENST00000514834 ALDH1L2Q3SY69 923 aa17.57■□□□□ 0.4
ITGA3-214ENST00000514834 MICALL2Q8IY33 904 aa17.57■□□□□ 0.4
ITGA3-214ENST00000514834 HELBQ8NG08 1087 aaPredicted RBP17.57■□□□□ 0.4
ITGA3-214ENST00000514834 SMC4Q9NTJ3 1288 aa17.57■□□□□ 0.4
ITGA3-214ENST00000514834 UTYO14607 1347 aa17.56■□□□□ 0.4
ITGA3-214ENST00000514834 VIL1P09327 827 aaKnown RBP17.56■□□□□ 0.4
ITGA3-214ENST00000514834 CHRNDQ07001 517 aa17.56■□□□□ 0.4
ITGA3-214ENST00000514834 IFIT5Q13325 482 aaKnown RBP17.56■□□□□ 0.4
ITGA3-214ENST00000514834 SAMD7Q7Z3H4 446 aa17.56■□□□□ 0.4
ITGA3-214ENST00000514834 MPHOSPH8Q99549 860 aa17.56■□□□□ 0.4
ITGA3-214ENST00000514834 CREBZFQ9NS37 354 aa17.56■□□□□ 0.4
ITGA3-214ENST00000514834 A0A1B0GUL6 1792 aa17.56■□□□□ 0.4
ITGA3-214ENST00000514834 G3V3G9 751 aa17.55■□□□□ 0.4
ITGA3-214ENST00000514834 TAF5LO75529 589 aa17.55■□□□□ 0.4
ITGA3-214ENST00000514834 HNRNPUQ00839 825 aaKnown RBP eCLIP17.55■□□□□ 0.4
ITGA3-214ENST00000514834 DCAF8Q5TAQ9 597 aa17.55■□□□□ 0.4
ITGA3-214ENST00000514834 DPF2Q92785 391 aa17.55■□□□□ 0.4
ITGA3-214ENST00000514834 USP44Q9H0E7 712 aa17.55■□□□□ 0.4
ITGA3-214ENST00000514834 PSME4Q14997 1843 aa17.55■□□□□ 0.4
ITGA3-214ENST00000514834 ZNF646O15015 1829 aaPredicted RBP17.54■□□□□ 0.4
ITGA3-214ENST00000514834 TBC1D10BQ4KMP7 808 aaPredicted RBP17.54■□□□□ 0.4
ITGA3-214ENST00000514834 DLK2Q6UY11 383 aa17.54■□□□□ 0.4
ITGA3-214ENST00000514834 JMYQ8N9B5 988 aa17.54■□□□□ 0.4
ITGA3-214ENST00000514834 MXD3Q9BW11 206 aa17.54■□□□□ 0.4
ITGA3-214ENST00000514834 BICC1Q9H694 974 aaKnown RBP17.54■□□□□ 0.4
ITGA3-214ENST00000514834 MKRN1Q9UHC7 482 aaKnown RBP17.54■□□□□ 0.4
ITGA3-214ENST00000514834 NOB1Q9ULX3 412 aaKnown RBP17.54■□□□□ 0.4
ITGA3-214ENST00000514834 MED23Q9ULK4 1368 aa17.53■□□□□ 0.4
ITGA3-214ENST00000514834 ZNF804BA4D1E1 1349 aa17.53■□□□□ 0.4
ITGA3-214ENST00000514834 IRS2Q9Y4H2 1338 aa17.53■□□□□ 0.4
ITGA3-214ENST00000514834 H7C1D1 291 aa17.53■□□□□ 0.4
ITGA3-214ENST00000514834 RARSP54136 660 aaKnown RBP17.53■□□□□ 0.4
ITGA3-214ENST00000514834 RBM26Q5T8P6 1007 aaKnown RBP17.53■□□□□ 0.4
ITGA3-214ENST00000514834 ANKRD44Q8N8A2 993 aa17.53■□□□□ 0.4
ITGA3-214ENST00000514834 GLIS2Q9BZE0 524 aaPredicted RBP17.53■□□□□ 0.4
ITGA3-214ENST00000514834 PUS3Q9BZE2 481 aaKnown RBP17.53■□□□□ 0.4
ITGA3-214ENST00000514834 PGAP2Q9UHJ9 254 aa17.53■□□□□ 0.4
ITGA3-214ENST00000514834 LEMD3Q9Y2U8 911 aa17.53■□□□□ 0.4
ITGA3-214ENST00000514834 POLR2AP24928 1970 aaKnown RBP17.53■□□□□ 0.4
ITGA3-214ENST00000514834 TMEM88BA6NKF7 163 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms