RNA–Protein interactions for RNA: ENST00000514636.1

LEMD2-213, Transcript of LEM domain containing 2, humanhuman

TSL 3

Gene LEMD2, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-213ENST00000514636 PLEKHF1Q96S99 279 aa19.35■□□□□ 0.69
LEMD2-213ENST00000514636 THUMPD2Q9BTF0 503 aaKnown RBP19.34■□□□□ 0.69
LEMD2-213ENST00000514636 PSME4Q14997 1843 aa19.33■□□□□ 0.69
LEMD2-213ENST00000514636 GPR25O00155 361 aa19.33■□□□□ 0.68
LEMD2-213ENST00000514636 CELF1Q92879 486 aaKnown RBP19.33■□□□□ 0.68
LEMD2-213ENST00000514636 GMLQ99445 158 aa19.33■□□□□ 0.68
LEMD2-213ENST00000514636 PODXL2Q9NZ53 605 aa19.33■□□□□ 0.68
LEMD2-213ENST00000514636 TRMT112Q9UI30 125 aaKnown RBP19.33■□□□□ 0.68
LEMD2-213ENST00000514636 RBM26Q5T8P6 1007 aaKnown RBP19.32■□□□□ 0.68
LEMD2-213ENST00000514636 AGBL3Q8NEM8 1001 aa19.32■□□□□ 0.68
LEMD2-213ENST00000514636 TBC1D16Q8TBP0 767 aa19.32■□□□□ 0.68
LEMD2-213ENST00000514636 HDAC9Q9UKV0 1011 aa19.32■□□□□ 0.68
LEMD2-213ENST00000514636 NSFL1CQ9UNZ2 370 aaKnown RBP19.32■□□□□ 0.68
LEMD2-213ENST00000514636 RBBP6Q7Z6E9 1792 aaKnown RBP19.32■□□□□ 0.68
LEMD2-213ENST00000514636 TBC1D8O95759 1140 aa19.31■□□□□ 0.68
LEMD2-213ENST00000514636 GPSM2P81274 684 aa19.31■□□□□ 0.68
LEMD2-213ENST00000514636 NFE2L2Q16236 605 aa19.31■□□□□ 0.68
LEMD2-213ENST00000514636 EYA3Q99504 573 aa19.31■□□□□ 0.68
LEMD2-213ENST00000514636 BABAM1Q9NWV8 329 aa19.31■□□□□ 0.68
LEMD2-213ENST00000514636 RANBP2P49792 3224 aaKnown RBP19.31■□□□□ 0.68
LEMD2-213ENST00000514636 ANGEL2Q5VTE6 544 aaKnown RBP19.3■□□□□ 0.68
LEMD2-213ENST00000514636 RIMBP2O15034 1052 aa19.29■□□□□ 0.68
LEMD2-213ENST00000514636 SCARF1Q14162 830 aa19.29■□□□□ 0.68
LEMD2-213ENST00000514636 COPS6Q7L5N1 327 aa19.29■□□□□ 0.68
LEMD2-213ENST00000514636 C6orf229H3BNL8 230 aa19.28■□□□□ 0.68
LEMD2-213ENST00000514636 ANXA1P04083 346 aa19.28■□□□□ 0.68
LEMD2-213ENST00000514636 FXR1P51114 621 aaKnown RBP eCLIP19.28■□□□□ 0.68
LEMD2-213ENST00000514636 DOK7Q18PE1 504 aa19.28■□□□□ 0.68
LEMD2-213ENST00000514636 RSBN1LQ6PCB5 846 aaPredicted RBP19.28■□□□□ 0.68
LEMD2-213ENST00000514636 XAGE3Q8WTP9 111 aa19.28■□□□□ 0.68
LEMD2-213ENST00000514636 KIAA0100Q14667 2235 aaKnown RBP19.27■□□□□ 0.68
LEMD2-213ENST00000514636 ISCA1Q9BUE6 129 aa19.27■□□□□ 0.68
LEMD2-213ENST00000514636 FKTNO75072 461 aa19.26■□□□□ 0.67
LEMD2-213ENST00000514636 INTS3Q68E01 1043 aaKnown RBP19.26■□□□□ 0.67
LEMD2-213ENST00000514636 MOB2Q70IA6 237 aa19.26■□□□□ 0.67
LEMD2-213ENST00000514636 LAMB1P07942 1786 aa19.26■□□□□ 0.67
LEMD2-213ENST00000514636 RPS8P62241 208 aaKnown RBP19.25■□□□□ 0.67
LEMD2-213ENST00000514636 TRIM28Q13263 835 aaKnown RBP19.25■□□□□ 0.67
LEMD2-213ENST00000514636 CNGB1Q14028 1251 aaPredicted RBP19.25■□□□□ 0.67
LEMD2-213ENST00000514636 ZC3H12CQ9C0D7 883 aaKnown RBP19.25■□□□□ 0.67
LEMD2-213ENST00000514636 R3HDMLQ9H3Y0 253 aa19.25■□□□□ 0.67
LEMD2-213ENST00000514636 MYOZ2Q9NPC6 264 aa19.25■□□□□ 0.67
LEMD2-213ENST00000514636 TSPYL4Q9UJ04 414 aa19.25■□□□□ 0.67
LEMD2-213ENST00000514636 UBE2Q2LH0YL09 131 aa19.24■□□□□ 0.67
LEMD2-213ENST00000514636 EIF2S2P20042 333 aaKnown RBP19.24■□□□□ 0.67
LEMD2-213ENST00000514636 SREBF2Q12772 1141 aa19.24■□□□□ 0.67
LEMD2-213ENST00000514636 PCGF6Q9BYE7 350 aa19.24■□□□□ 0.67
LEMD2-213ENST00000514636 ZNF646O15015 1829 aaPredicted RBP19.23■□□□□ 0.67
LEMD2-213ENST00000514636 USP17L8P0C7I0 530 aa19.23■□□□□ 0.67
LEMD2-213ENST00000514636 FAM89AQ96GI7 184 aa19.23■□□□□ 0.67
LEMD2-213ENST00000514636 A0A0C4DFX4 3053 aa19.23■□□□□ 0.67
LEMD2-213ENST00000514636 CEP290O15078 2479 aa19.23■□□□□ 0.67
LEMD2-213ENST00000514636 POTEFA5A3E0 1075 aa19.22■□□□□ 0.67
LEMD2-213ENST00000514636 NEFMP07197 916 aa19.22■□□□□ 0.67
LEMD2-213ENST00000514636 PLBD2Q8NHP8 589 aa19.22■□□□□ 0.67
LEMD2-213ENST00000514636 ALDH1A1P00352 501 aa19.21■□□□□ 0.67
LEMD2-213ENST00000514636 AIMP1Q12904 312 aaKnown RBP19.21■□□□□ 0.67
LEMD2-213ENST00000514636 LDLRAD1Q5T700 205 aa19.21■□□□□ 0.67
LEMD2-213ENST00000514636 PODNQ7Z5L7 613 aa19.2■□□□□ 0.66
LEMD2-213ENST00000514636 ARMC5Q96C12 935 aa19.2■□□□□ 0.66
LEMD2-213ENST00000514636 TRIOBPQ9H2D6 2365 aa19.19■□□□□ 0.66
LEMD2-213ENST00000514636 UFL1O94874 794 aa19.19■□□□□ 0.66
LEMD2-213ENST00000514636 MMP14P50281 582 aa19.19■□□□□ 0.66
LEMD2-213ENST00000514636 OTOP1Q7RTM1 612 aa19.19■□□□□ 0.66
LEMD2-213ENST00000514636 GGA1Q9UJY5 639 aa19.19■□□□□ 0.66
LEMD2-213ENST00000514636 USP17L3A6NCW0 530 aa19.18■□□□□ 0.66
LEMD2-213ENST00000514636 USP17L4A6NCW7 530 aa19.18■□□□□ 0.66
LEMD2-213ENST00000514636 NBPF9Q3BBW0 867 aa19.18■□□□□ 0.66
LEMD2-213ENST00000514636 SPRYD7Q5W111 196 aa19.18■□□□□ 0.66
LEMD2-213ENST00000514636 USP17L1Q7RTZ2 530 aa19.18■□□□□ 0.66
LEMD2-213ENST00000514636 WNT10BO00744 389 aa19.17■□□□□ 0.66
LEMD2-213ENST00000514636 IRS4O14654 1257 aaPredicted RBP19.17■□□□□ 0.66
LEMD2-213ENST00000514636 INHBEP58166 350 aa19.17■□□□□ 0.66
LEMD2-213ENST00000514636 PTPN12Q05209 780 aaKnown RBP19.17■□□□□ 0.66
LEMD2-213ENST00000514636 ANKRD13DQ6ZTN6 518 aa19.17■□□□□ 0.66
LEMD2-213ENST00000514636 MAP3K11Q16584 847 aa19.16■□□□□ 0.66
LEMD2-213ENST00000514636 PRAMEF18Q5VWM3 479 aa19.16■□□□□ 0.66
LEMD2-213ENST00000514636 PNNQ9H307 717 aaKnown RBP19.16■□□□□ 0.66
LEMD2-213ENST00000514636 SEC31BQ9NQW1 1179 aa19.16■□□□□ 0.66
LEMD2-213ENST00000514636 COL6A3P12111 3177 aa19.16■□□□□ 0.66
LEMD2-213ENST00000514636 HOXB7P09629 217 aa19.15■□□□□ 0.66
LEMD2-213ENST00000514636 DACT2Q5SW24 774 aa19.15■□□□□ 0.66
LEMD2-213ENST00000514636 ZBED3Q96IU2 234 aaPredicted RBP19.15■□□□□ 0.66
LEMD2-213ENST00000514636 CHPF2Q9P2E5 772 aa19.15■□□□□ 0.66
LEMD2-213ENST00000514636 ANKIB1Q9P2G1 1089 aa19.15■□□□□ 0.66
LEMD2-213ENST00000514636 SCAF8Q9UPN6 1271 aaKnown RBP19.15■□□□□ 0.66
LEMD2-213ENST00000514636 PTPN22Q9Y2R2 807 aa19.15■□□□□ 0.66
LEMD2-213ENST00000514636 TRIM17Q9Y577 477 aa19.15■□□□□ 0.66
LEMD2-213ENST00000514636 XDHP47989 1333 aa19.15■□□□□ 0.66
LEMD2-213ENST00000514636 COL1A1P02452 1464 aaPredicted RBP19.15■□□□□ 0.66
LEMD2-213ENST00000514636 CHL1O00533 1208 aa19.14■□□□□ 0.65
LEMD2-213ENST00000514636 ZBTB48P10074 688 aaPredicted RBP19.14■□□□□ 0.65
LEMD2-213ENST00000514636 NF2P35240 595 aa19.14■□□□□ 0.65
LEMD2-213ENST00000514636 IFNL1Q8IU54 200 aa19.14■□□□□ 0.65
LEMD2-213ENST00000514636 ZBTB38Q8NAP3 1195 aaPredicted RBP19.14■□□□□ 0.65
LEMD2-213ENST00000514636 MED23Q9ULK4 1368 aa19.14■□□□□ 0.65
LEMD2-213ENST00000514636 LAMA3Q16787 3333 aa19.14■□□□□ 0.65
LEMD2-213ENST00000514636 MANSC4A6NHS7 340 aaPredicted RBP19.13■□□□□ 0.65
LEMD2-213ENST00000514636 UNCXA6NJT0 531 aa19.13■□□□□ 0.65
LEMD2-213ENST00000514636 ATP5J2-PTCD1G3V325 749 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms