RNA–Protein interactions for RNA: ENST00000514497.6

SNCAIP-220, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-220ENST00000514497 NPHP1O15259 732 aa20.67■□□□□ 0.9
SNCAIP-220ENST00000514497 ST5P78524 1137 aa20.67■□□□□ 0.9
SNCAIP-220ENST00000514497 WDR33Q9C0J8 1336 aaKnown RBP20.67■□□□□ 0.9
SNCAIP-220ENST00000514497 PDE4DIPQ5VU43 2346 aa20.67■□□□□ 0.9
SNCAIP-220ENST00000514497 CTSWP56202 376 aa20.66■□□□□ 0.9
SNCAIP-220ENST00000514497 RTL5Q5HYW3 569 aaPredicted RBP20.66■□□□□ 0.9
SNCAIP-220ENST00000514497 ZNF622Q969S3 477 aaKnown RBP eCLIP20.66■□□□□ 0.9
SNCAIP-220ENST00000514497 NLRP3Q96P20 1036 aa20.66■□□□□ 0.9
SNCAIP-220ENST00000514497 TAOK3Q9H2K8 898 aa20.66■□□□□ 0.9
SNCAIP-220ENST00000514497 TAF1DQ9H5J8 278 aaPredicted RBP20.66■□□□□ 0.9
SNCAIP-220ENST00000514497 RTL9Q8NET4 1388 aa20.66■□□□□ 0.9
SNCAIP-220ENST00000514497 CACNA1SQ13698 1873 aa20.65■□□□□ 0.9
SNCAIP-220ENST00000514497 FAM177BA6PVY3 158 aa20.65■□□□□ 0.9
SNCAIP-220ENST00000514497 SRGAP3O43295 1099 aa20.65■□□□□ 0.9
SNCAIP-220ENST00000514497 POLA2Q14181 598 aa20.65■□□□□ 0.9
SNCAIP-220ENST00000514497 SF3B3Q15393 1217 aaKnown RBP20.65■□□□□ 0.9
SNCAIP-220ENST00000514497 EAPPQ56P03 285 aaPredicted RBP20.65■□□□□ 0.9
SNCAIP-220ENST00000514497 PRR5LQ6MZQ0 368 aa20.65■□□□□ 0.9
SNCAIP-220ENST00000514497 LMBR1LQ6UX01 489 aa20.65■□□□□ 0.9
SNCAIP-220ENST00000514497 SIRT2Q8IXJ6 389 aa20.65■□□□□ 0.9
SNCAIP-220ENST00000514497 TTLL11Q8NHH1 800 aa20.65■□□□□ 0.9
SNCAIP-220ENST00000514497 CLEC11AQ9Y240 323 aa20.65■□□□□ 0.9
SNCAIP-220ENST00000514497 ANKRD31Q8N7Z5 1873 aa20.64■□□□□ 0.9
SNCAIP-220ENST00000514497 LTBP3Q9NS15 1303 aa20.64■□□□□ 0.89
SNCAIP-220ENST00000514497 TNRC18O15417 2968 aaPredicted RBP20.64■□□□□ 0.89
SNCAIP-220ENST00000514497 CCDC152Q4G0S7 254 aa20.64■□□□□ 0.89
SNCAIP-220ENST00000514497 EPHA10Q5JZY3 1008 aa20.64■□□□□ 0.89
SNCAIP-220ENST00000514497 CENPQQ7L2Z9 268 aaPredicted RBP20.64■□□□□ 0.89
SNCAIP-220ENST00000514497 NUTM1Q86Y26 1132 aa20.64■□□□□ 0.89
SNCAIP-220ENST00000514497 SYNE4Q8N205 404 aa20.64■□□□□ 0.89
SNCAIP-220ENST00000514497 JARID2Q92833 1246 aaPredicted RBP20.64■□□□□ 0.89
SNCAIP-220ENST00000514497 GCC1Q96CN9 775 aa20.64■□□□□ 0.89
SNCAIP-220ENST00000514497 BEGAINQ9BUH8 593 aa20.64■□□□□ 0.89
SNCAIP-220ENST00000514497 PDZRN3Q9UPQ7 1066 aa20.64■□□□□ 0.89
SNCAIP-220ENST00000514497 HSP90AB4PQ58FF6 505 aa20.63■□□□□ 0.89
SNCAIP-220ENST00000514497 L3MBTL3Q96JM7 780 aaPredicted RBP20.63■□□□□ 0.89
SNCAIP-220ENST00000514497 FBXO3Q9UK99 471 aa20.63■□□□□ 0.89
SNCAIP-220ENST00000514497 ABT1Q9ULW3 272 aaKnown RBP20.63■□□□□ 0.89
SNCAIP-220ENST00000514497 COL11A2P13942 1736 aaPredicted RBP20.62■□□□□ 0.89
SNCAIP-220ENST00000514497 PNMA6EA0A0J9YXQ4 647 aa20.62■□□□□ 0.89
SNCAIP-220ENST00000514497 HCLS1P14317 486 aaPredicted RBP20.62■□□□□ 0.89
SNCAIP-220ENST00000514497 CCDC57Q2TAC2 916 aa20.62■□□□□ 0.89
SNCAIP-220ENST00000514497 BRIP1Q9BX63 1249 aa20.62■□□□□ 0.89
SNCAIP-220ENST00000514497 DCTPP1Q9H773 170 aa20.62■□□□□ 0.89
SNCAIP-220ENST00000514497 KLRG2A4D1S0 409 aaPredicted RBP20.61■□□□□ 0.89
SNCAIP-220ENST00000514497 IFIT5Q13325 482 aaKnown RBP20.61■□□□□ 0.89
SNCAIP-220ENST00000514497 COPRSQ9NQ92 184 aa20.61■□□□□ 0.89
SNCAIP-220ENST00000514497 NOP58Q9Y2X3 529 aaKnown RBP20.61■□□□□ 0.89
SNCAIP-220ENST00000514497 ADAMTSL1Q8N6G6 1762 aa20.61■□□□□ 0.89
SNCAIP-220ENST00000514497 THSD7BQ9C0I4 1608 aa20.6■□□□□ 0.89
SNCAIP-220ENST00000514497 IGHDP01880 384 aa20.6■□□□□ 0.89
SNCAIP-220ENST00000514497 PDE6BP35913 854 aa20.6■□□□□ 0.89
SNCAIP-220ENST00000514497 SMC5Q8IY18 1101 aa20.6■□□□□ 0.89
SNCAIP-220ENST00000514497 ABCC12Q96J65 1359 aa20.59■□□□□ 0.89
SNCAIP-220ENST00000514497 ANKRD18BA2A2Z9 1011 aa20.59■□□□□ 0.89
SNCAIP-220ENST00000514497 CRY2Q49AN0 593 aa20.59■□□□□ 0.89
SNCAIP-220ENST00000514497 SLX4Q8IY92 1834 aa20.59■□□□□ 0.89
SNCAIP-220ENST00000514497 RAB11FIP3O75154 756 aa20.58■□□□□ 0.89
SNCAIP-220ENST00000514497 RFX5P48382 616 aaPredicted RBP20.58■□□□□ 0.89
SNCAIP-220ENST00000514497 MAP1SQ66K74 1059 aaPredicted RBP20.58■□□□□ 0.89
SNCAIP-220ENST00000514497 B4GALNT3Q6L9W6 998 aa20.58■□□□□ 0.89
SNCAIP-220ENST00000514497 CNTROBQ8N137 903 aa20.58■□□□□ 0.89
SNCAIP-220ENST00000514497 CDC5LQ99459 802 aaKnown RBP20.58■□□□□ 0.89
SNCAIP-220ENST00000514497 HACL1Q9UJ83 578 aa20.58■□□□□ 0.89
SNCAIP-220ENST00000514497 ITGA6P23229 1130 aa20.57■□□□□ 0.88
SNCAIP-220ENST00000514497 PAXIP1Q6ZW49 1069 aaPredicted RBP20.57■□□□□ 0.88
SNCAIP-220ENST00000514497 ERC1Q8IUD2 1116 aa20.57■□□□□ 0.88
SNCAIP-220ENST00000514497 CHMP3Q9Y3E7 222 aa20.57■□□□□ 0.88
SNCAIP-220ENST00000514497 CASP8AP2Q9UKL3 1982 aa20.56■□□□□ 0.88
SNCAIP-220ENST00000514497 CIAO1O76071 339 aa20.56■□□□□ 0.88
SNCAIP-220ENST00000514497 EPHX2P34913 555 aa20.56■□□□□ 0.88
SNCAIP-220ENST00000514497 PTPN12Q05209 780 aaKnown RBP20.56■□□□□ 0.88
SNCAIP-220ENST00000514497 MCOLN1Q9GZU1 580 aa20.56■□□□□ 0.88
SNCAIP-220ENST00000514497 GREM2Q9H772 168 aa20.56■□□□□ 0.88
SNCAIP-220ENST00000514497 TSKSQ9UJT2 592 aa20.56■□□□□ 0.88
SNCAIP-220ENST00000514497 SURF6O75683 361 aaKnown RBP20.55■□□□□ 0.88
SNCAIP-220ENST00000514497 HOXA10P31260 410 aaPredicted RBP20.55■□□□□ 0.88
SNCAIP-220ENST00000514497 GRM1Q13255 1194 aa20.55■□□□□ 0.88
SNCAIP-220ENST00000514497 TAF7LQ5H9L4 462 aa20.55■□□□□ 0.88
SNCAIP-220ENST00000514497 DDX46Q7L014 1031 aaKnown RBP20.55■□□□□ 0.88
SNCAIP-220ENST00000514497 PNMA8AQ86V59 439 aaPredicted RBP20.55■□□□□ 0.88
SNCAIP-220ENST00000514497 CAPNS2Q96L46 248 aa20.55■□□□□ 0.88
SNCAIP-220ENST00000514497 ECE1P42892 770 aa20.54■□□□□ 0.88
SNCAIP-220ENST00000514497 G3BP1Q13283 466 aaKnown RBP eCLIP20.54■□□□□ 0.88
SNCAIP-220ENST00000514497 SOGA3Q5TF21 947 aa20.54■□□□□ 0.88
SNCAIP-220ENST00000514497 CCDC24Q8N4L8 307 aa20.54■□□□□ 0.88
SNCAIP-220ENST00000514497 GPR101Q96P66 508 aaPredicted RBP20.54■□□□□ 0.88
SNCAIP-220ENST00000514497 RPGRQ92834 1020 aaKnown RBP20.53■□□□□ 0.88
SNCAIP-220ENST00000514497 CNKSR1Q969H4 720 aa20.53■□□□□ 0.88
SNCAIP-220ENST00000514497 RBM17Q96I25 401 aaKnown RBP20.53■□□□□ 0.88
SNCAIP-220ENST00000514497 CRAMP1Q96RY5 1269 aa20.53■□□□□ 0.88
SNCAIP-220ENST00000514497 ZBTB47Q9UFB7 747 aaPredicted RBP20.53■□□□□ 0.88
SNCAIP-220ENST00000514497 ZNF541Q9H0D2 1346 aa20.53■□□□□ 0.88
SNCAIP-220ENST00000514497 EYA2O00167 538 aa20.52■□□□□ 0.88
SNCAIP-220ENST00000514497 NPR1P16066 1061 aa20.52■□□□□ 0.88
SNCAIP-220ENST00000514497 ALDH1B1P30837 517 aa20.52■□□□□ 0.88
SNCAIP-220ENST00000514497 IGHMBP2P38935 993 aaKnown RBP20.52■□□□□ 0.88
SNCAIP-220ENST00000514497 IL15P40933 162 aaPredicted RBP20.52■□□□□ 0.88
SNCAIP-220ENST00000514497 PRPF40BQ6NWY9 871 aaKnown RBP20.52■□□□□ 0.88
SNCAIP-220ENST00000514497 TMC4Q7Z404 712 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms